Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for snx1b

Gene Name Gene ID Reads Annotation
snx1b ENSDARG00000103529 4 sorting nexin 1b [Source:ZFIN;Acc:ZDB-GENE-050913-82]










Genes with expression patterns similar to snx1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. snx1b ENSDARG00000103529 4 3 - 1.000 - - 1.000 - - - 1.000 sorting nexin 1b [Source:ZFIN;Acc:ZDB-GENE-050913-82]
2. heyl ENSDARG00000055798, ENSDARG00000112770 76 1.922 - 1.000 - - 0.922 - - - - hes-related family bHLH transcription factor with YRPW motif-like [Source:ZFIN;Acc:ZDB-GENE-030131-7074]
3. scara3 ENSDARG00000008060 169 1.868 - 1.000 - - 0.868 - - - - scavenger receptor class A, member 3 [Source:ZFIN;Acc:ZDB-GENE-041014-317]
4. zgc:175280 ENSDARG00000099111 71 1.855 - 1.000 - - 0.855 - - - - zgc:175280 [Source:ZFIN;Acc:ZDB-GENE-080219-39]
5. gpr155b ENSDARG00000071086 54 1.662 - 0.806 - - 0.856 - - - - G protein-coupled receptor 155b [Source:ZFIN;Acc:ZDB-GENE-110815-2]
6. wu:fb37b09 wu:fb37b09 10685 1 - 1.000 - - - - - - -
7. si:ch73-59c19.1 ENSDARG00000091909 64 1 - 1.000 - - - - - - - si:ch73-59c19.1 [Source:ZFIN;Acc:ZDB-GENE-100922-247]
8. taok3b ENSDARG00000094052 36 1 - 1.000 - - - - - - - TAO kinase 3b [Source:ZFIN;Acc:ZDB-GENE-060526-59]
9. C21H11orf82 C21H11orf82 50 1 - 1.000 - - - - - - -
10. bbs10 ENSDARG00000069515, ENSDARG00000110925 36 1 - 1.000 - - - - - - - Bardet-Biedl syndrome 10 [Source:ZFIN;Acc:ZDB-GENE-060503-355]
11. matn3a ENSDARG00000069245 2410 1 - 1.000 - - - - - - - matrilin 3a [Source:ZFIN;Acc:ZDB-GENE-040822-21]
12. sdhda ENSDARG00000055712 50 1 - 1.000 - - - - - - - succinate dehydrogenase complex, subunit D, integral membrane protein a [Source:ZFIN;Acc:ZDB-GENE-040718-192]
13. si:ch211-208f21.1 si:ch211-208f21.1 1 1 - 1.000 - - - - - - -
14. si:ch73-236c18.7 ENSDARG00000098706 6 1 - - - - - - - - 1.000 si:ch73-236c18.7 [Source:ZFIN;Acc:ZDB-GENE-121214-3]
15. si:dkey-272j9.4 si:dkey-272j9.4 2 1 - 1.000 - - - - - - -
16. mir21-2 18 1 - 1.000 - - - - - - - microRNA 21-2
17. si:dkey-88e10.2 si:dkey-88e10.2 7 1 - 1.000 - - - - - - -
18. zgc:193690 34 1 - 1.000 - - - - - - - zgc:193690
19. si:ch211-268b13.3 si:ch211-268b13.3 28 1 - 1.000 - - - - - - -
20. ZP2_3 ZP2_3 2 1 - - - - - - - - 1.000
21. mir457b 21 1 - 1.000 - - - - - - - microRNA 457b
22. jam3a ENSDARG00000114589 630 1 - 1.000 - - - - - - - junctional adhesion molecule 3a [Source:ZFIN;Acc:ZDB-GENE-070424-177]
23. GRIN3A ENSDARG00000075802 27 1 - 1.000 - - - - - - - glutamate receptor, ionotropic, N-methyl-D-aspartate 3A [Source:ZFIN;Acc:ZDB-GENE-130530-780]
24. CR848836.6 CR848836.6 93 1 - 1.000 - - - - - - -
25. PPP2R5B ENSDARG00000054931 213 1 - 1.000 - - - - - - - protein phosphatase 2, regulatory subunit B', beta [Source:ZFIN;Acc:ZDB-GENE-101208-1]
26. si:dkey-51d8.6 ENSDARG00000090769 17 1 - - - - - - - - 1.000 si:dkey-51d8.6 [Source:ZFIN;Acc:ZDB-GENE-110914-115]
27. IQCK ENSDARG00000076831, ENSDARG00000112508 6 1 - 1.000 - - - - - - - IQ motif containing K [Source:ZFIN;Acc:ZDB-GENE-081022-109]
28. CU694952.2 CU694952.2 3 1 - 1.000 - - - - - - -
29. rnf217 ENSDARG00000060944 10 1 - 1.000 - - - - - - - ring finger protein 217 [Source:ZFIN;Acc:ZDB-GENE-060503-400]
30. gria3b ENSDARG00000037498, ENSDARG00000111839 2 1 - 1.000 - - - - - - - glutamate receptor, ionotropic, AMPA 3b [Source:ZFIN;Acc:ZDB-GENE-030616-53]
31. ctskl ctskl 17 1 - 1.000 - - - - - - -
32. rcv1 rcv1 77 1 - 1.000 - - - - - - -
33. cacna1c ENSDARG00000008398 193 1 - 1.000 - - - - - - - calcium channel, voltage-dependent, L type, alpha 1C subunit [Source:ZFIN;Acc:ZDB-GENE-020129-1]
34. C2CD4A ENSDARG00000061416 61 1 - 1.000 - - - - - - - C2 calcium dependent domain containing 4A [Source:ZFIN;Acc:ZDB-GENE-030131-5712]
35. slc17a8 ENSDARG00000057728, ENSDARG00000109791 8 1 - 1.000 - - - - - - - solute carrier family 17 (vesicular glutamate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-060503-416]
36. sphkap ENSDARG00000017429 60 1 - 1.000 - - - - - - - SPHK1 interactor, AKAP domain containing [Source:ZFIN;Acc:ZDB-GENE-050419-32]
37. CABZ01038708.1 CABZ01038708.1 28 1 - 1.000 - - - - - - -
38. ankar ENSDARG00000000516 3 1 - 1.000 - - - - - - - ankyrin and armadillo repeat containing [Source:ZFIN;Acc:ZDB-GENE-030616-533]
39. CT027674.1 ENSDARG00000106606 11 1 - 1.000 - - - - - - - probable E3 ubiquitin-protein ligase TRIML1 [Source:NCBI gene;Acc:108191962]
40. VMAC ENSDARG00000110997 2 1 - 1.000 - - - - - - - vimentin type intermediate filament associated coiled-coil protein [Source:HGNC Symbol;Acc:HGNC:33803]
41. wu:fe11b02 wu:fe11b02 9 1 - - - - - - - - 1.000
42. CABZ01117437.1 CABZ01117437.1 11 1 - 1.000 - - - - - - -
43. si:ch1073-185p12.2 ENSDARG00000100199 7 1 - 1.000 - - - - - - - si:ch1073-185p12.2 [Source:ZFIN;Acc:ZDB-GENE-110411-196]
44. im:7151068 im:7151068 2 1 - 1.000 - - - - - - -
45. BX005265.1 BX005265.1 4 1 - - - - 1.000 - - - -
46. PNPLA2 ENSDARG00000089390 0 1 - 1.000 - - - - - - - patatin-like phospholipase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-120913-3]
47. si:ch1073-170o4.1 ENSDARG00000092780 18 1 - 1.000 - - - - - - - si:ch1073-170o4.1 [Source:ZFIN;Acc:ZDB-GENE-030131-7012]
48. ano8a ENSDARG00000076265 20 1 - 1.000 - - - - - - - anoctamin 8a [Source:ZFIN;Acc:ZDB-GENE-070912-583]
49. trim35-27 ENSDARG00000035009 62 1 - 1.000 - - - - - - - tripartite motif containing 35-27 [Source:ZFIN;Acc:ZDB-GENE-030131-6185]
50. C25H12orf29 C25H12orf29 31 1 - 1.000 - - - - - - -
51. BX323793.2 BX323793.2 61 1 - 1.000 - - - - - - -
52. si:ch73-62b13.1 ENSDARG00000093269 11 1 - 1.000 - - - - - - - si:ch73-62b13.1 [Source:ZFIN;Acc:ZDB-GENE-050420-366]
53. loxhd1a ENSDARG00000094738 7 1 - 1.000 - - - - - - - lipoxygenase homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-091112-20]
54. CR933820.2 CR933820.2 152 1 - 1.000 - - - - - - -
55. CU207301.2 ENSDARG00000097677 2 1 - 1.000 - - - - - - -
56. npffr2.1 npffr2.1 60 1 - 1.000 - - - - - - -
57. U11 U11 11 1 - 1.000 - - - - - - -
58. pcdh8 ENSDARG00000006467 317 1 - 1.000 - - - - - - - protocadherin 8 [Source:ZFIN;Acc:ZDB-GENE-980526-242]
59. si:dkeyp-82a1.2 ENSDARG00000094192 2 1 - 1.000 - - - - - - - si:dkeyp-82a1.2 [Source:ZFIN;Acc:ZDB-GENE-081104-475]
60. gc2 ENSDARG00000018329 0 1 - 1.000 - - - - - - - guanylyl cyclase 2 [Source:ZFIN;Acc:ZDB-GENE-011128-8]
61. mir30b 4 1 - 1.000 - - - - - - - microRNA 30b
62. si:ch211-120c15.3 ENSDARG00000101807 19 1 - 1.000 - - - - - - - si:ch211-120c15.3 [Source:ZFIN;Acc:ZDB-GENE-110913-99]
63. CABZ01087025.1 ENSDARG00000117232 10 1 - 1.000 - - - - - - -
64. gata2b ENSDARG00000009094 16 1 - 1.000 - - - - - - - GATA binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-040718-440]
65. trim35-3_1 ENSDARG00000052255 6 1 - 1.000 - - - - - - - tripartite motif containing 35-3 [Source:ZFIN;Acc:ZDB-GENE-070912-56]
66. ccdc129 37 1 - 1.000 - - - - - - - coiled-coil domain containing 129, transcript variant X2
67. BX511034.1 ENSDARG00000071629 7 1 - 1.000 - - - - - - -
68. mamdc2a ENSDARG00000098345 21 1 - 1.000 - - - - - - - MAM domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-16]
69. CR628323.3 ENSDARG00000106158 1 1 - 1.000 - - - - - - - tumor protein p53 inducible protein 3 [Source:NCBI gene;Acc:796473]
70. ankrd33aa ENSDARG00000055638 6 1 - 1.000 - - - - - - - ankyrin repeat domain 33Aa [Source:ZFIN;Acc:ZDB-GENE-080520-2]
71. si:dkey-169l5.3 si:dkey-169l5.3 239 1 - 1.000 - - - - - - -
72. GABRR1 ENSDARG00000043902 71 1 - 1.000 - - - - - - - gamma-aminobutyric acid (GABA) A receptor, rho 1 [Source:ZFIN;Acc:ZDB-GENE-040724-212]
73. fam213ab 1 1 - 1.000 - - - - - - - family with sequence similarity 213, member Ab
74. slc4a4b ENSDARG00000044808 9 1 - - - - 1.000 - - - - solute carrier family 4 (sodium bicarbonate cotransporter), member 4b [Source:ZFIN;Acc:ZDB-GENE-091030-1]
75. ela3l ENSDARG00000007276 11 1 - - - - 1.000 - - - - elastase 3 like [Source:ZFIN;Acc:ZDB-GENE-060710-2]
76. FP325123.1_1 ENSDARG00000105359 38 1 - 1.000 - - - - - - - Histone H3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q4QRF4]
77. FP102786.1 ENSDARG00000090551 3 1 - 1.000 - - - - - - - GTPase IMAP family member 8-like [Source:NCBI gene;Acc:101882698]
78. ATXN1 ATXN1 12 1 - 1.000 - - - - - - -
79. C1GALT1_1 C1GALT1_1 1 1 - 1.000 - - - - - - -
80. itln1 ENSDARG00000007534 8 1 - 1.000 - - - - - - - intelectin 1 [Source:ZFIN;Acc:ZDB-GENE-060929-564]
81. ncam2 ENSDARG00000017466 175 1 - 1.000 - - - - - - - neural cell adhesion molecule 2 [Source:ZFIN;Acc:ZDB-GENE-010822-1]
82. CR936975.1 ENSDARG00000096862 22 1 - 1.000 - - - - - - -
83. si:ch1073-464p5.5 ENSDARG00000079544 5 1 - 1.000 - - - - - - - si:ch1073-464p5.5 [Source:ZFIN;Acc:ZDB-GENE-091116-35]
84. CABZ01079979.1 CABZ01079979.1 1 1 - 1.000 - - - - - - -
85. si:dkey-225h23.4 si:dkey-225h23.4 7 1 - - - - 1.000 - - - -
86. DBNDD1 DBNDD1 43 1 - 1.000 - - - - - - -
87. b3gat2 ENSDARG00000030733 348 1 - 1.000 - - - - - - - beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S) [Source:ZFIN;Acc:ZDB-GENE-040801-191]
88. asf1ba_1 ENSDARG00000101037 3 1 - 1.000 - - - - - - - anti-silencing function 1Ba histone chaperone [Source:ZFIN;Acc:ZDB-GENE-031118-197]
89. CU693369.1 CU693369.1 2 1 - 1.000 - - - - - - -
90. fancf ENSDARG00000019250 111 1 - 1.000 - - - - - - - FA complementation group F [Source:ZFIN;Acc:ZDB-GENE-060306-3]
91. BX248582.3 BX248582.3 3 1 - 1.000 - - - - - - -
92. ankrd45 ENSDARG00000011326 62 1 - 1.000 - - - - - - - ankyrin repeat domain 45 [Source:ZFIN;Acc:ZDB-GENE-050522-311]
93. prph2a ENSDARG00000038018 2 1 - 1.000 - - - - - - - peripherin 2a (retinal degeneration, slow) [Source:ZFIN;Acc:ZDB-GENE-000616-8]
94. gata1b ENSDARG00000059130 151 1 - 1.000 - - - - - - - GATA binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-081104-43]
95. clcn1a ENSDARG00000062084 120 1 - 1.000 - - - - - - - chloride channel, voltage-sensitive 1a [Source:ZFIN;Acc:ZDB-GENE-060503-333]
96. si:ch211-262h13.4 si:ch211-262h13.4 3 1 - 1.000 - - - - - - -
97. gabpb1 ENSDARG00000023659 26 1 - 1.000 - - - - - - - GA binding protein transcription factor subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-061027-46]
98. si:ch211-162i8.2 ENSDARG00000096041 4 1 - 1.000 - - - - - - - si:ch211-162i8.2 [Source:ZFIN;Acc:ZDB-GENE-110913-56]
99. TNS3_1 TNS3_1 8 1 - 1.000 - - - - - - -
100. slc1a3b ENSDARG00000043148 431 1 - 1.000 - - - - - - - solute carrier family 1 (glial high affinity glutamate transporter), member 3b [Source:ZFIN;Acc:ZDB-GENE-090708-3]

There are 433 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA