Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for slc1a3b

Gene Name Gene ID Reads Annotation
slc1a3b ENSDARG00000043148 431 solute carrier family 1 (glial high affinity glutamate transporter), member 3b [Source:ZFIN;Acc:ZDB-GENE-090708-3]










Genes with expression patterns similar to slc1a3b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. slc1a3b ENSDARG00000043148 431 7 - 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 solute carrier family 1 (glial high affinity glutamate transporter), member 3b [Source:ZFIN;Acc:ZDB-GENE-090708-3]
2. vax2 ENSDARG00000058702 175 4.124 - 1.000 0.878 0.790 0.725 - - - 0.731 ventral anterior homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-030904-8]
3. zgc:171531 zgc:171531 77 3.243 - - 0.808 0.790 0.918 - - - 0.727
4. celf4 ENSDARG00000070045 1537 3.24 - 0.866 0.791 - 0.761 0.822 - - - CUGBP, Elav-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-300]
5. SYNDIG1 ENSDARG00000100751 165 2.918 - 1.000 - - - 0.935 - 0.983 - synapse differentiation inducing 1 [Source:HGNC Symbol;Acc:HGNC:15885]
6. cspg5b ENSDARG00000099793 67 2.669 - 1.000 - - - 0.907 - - 0.762 chondroitin sulfate proteoglycan 5b [Source:ZFIN;Acc:ZDB-GENE-060503-368]
7. vax1 ENSDARG00000021916, ENSDARG00000114230 152 2.5 - - 0.895 0.877 - - - - 0.728 ventral anterior homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030904-9]
8. nkx2.1b nkx2.1b 125 2.443 - - 0.794 0.762 0.887 - - - -
9. BX324132.5 BX324132.5 115 2.419 - - 0.782 - 0.786 - - - 0.851
10. fezf2 ENSDARG00000070677 224 2.365 - - 0.829 - 0.808 - - - 0.728 FEZ family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-001103-3]
11. nkx2.1a nkx2.1a 156 2.358 - - 0.872 - 0.765 - - - 0.721
12. PPP2R5B ENSDARG00000054931 213 1.932 - 1.000 - - - 0.932 - - - protein phosphatase 2, regulatory subunit B', beta [Source:ZFIN;Acc:ZDB-GENE-101208-1]
13. pcdh8 ENSDARG00000006467 317 1.892 - 1.000 - - - 0.892 - - - protocadherin 8 [Source:ZFIN;Acc:ZDB-GENE-980526-242]
14. BX571853.2 ENSDARG00000110441 21 1.844 - 1.000 - - - 0.844 - - -
15. si:dkey-77f17.1 si:dkey-77f17.1 83 1.844 - 1.000 - - - 0.844 - - -
16. TMEM63C ENSDARG00000004158, ENSDARG00000112348 21 1.839 - 1.000 - - - 0.839 - - - transmembrane protein 63C [Source:ZFIN;Acc:ZDB-GENE-120928-2]
17. si:ch211-195i24.1 si:ch211-195i24.1 10 1.821 - 1.000 - - - 0.821 - - -
18. si:dkeyp-82a1.2 ENSDARG00000094192 2 1.821 - 1.000 - - - 0.821 - - - si:dkeyp-82a1.2 [Source:ZFIN;Acc:ZDB-GENE-081104-475]
19. GRIN3A ENSDARG00000075802 27 1.803 - 1.000 - - - 0.803 - - - glutamate receptor, ionotropic, N-methyl-D-aspartate 3A [Source:ZFIN;Acc:ZDB-GENE-130530-780]
20. sult4a1 ENSDARG00000101967 205 1.799 - - - - - 0.815 - 0.984 - sulfotransferase family 4A, member 1 [Source:ZFIN;Acc:ZDB-GENE-060421-2705]
21. b3gat2 ENSDARG00000030733 348 1.79 - 1.000 - - - 0.790 - - - beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S) [Source:ZFIN;Acc:ZDB-GENE-040801-191]
22. cadpsb ENSDARG00000070567 458 1.777 - - - - - 0.803 - 0.974 - Ca2+-dependent activator protein for secretion b [Source:ZFIN;Acc:ZDB-GENE-110621-2]
23. dlx1a ENSDARG00000013125 142 1.758 - - 0.946 - 0.812 - - - - distal-less homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-990415-48]
24. GPR101 ENSDARG00000039218 157 1.733 - - 0.749 - - - - 0.984 - G protein-coupled receptor 101 [Source:ZFIN;Acc:ZDB-GENE-070914-1]
25. ek1 ENSDARG00000020080 742 1.731 - 0.738 - - - - - 0.993 - eph-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-990415-58]
26. lhx1a ENSDARG00000014018 958 1.731 - - - - - - - 0.988 0.743 LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
27. DHX32 DHX32 181 1.729 - 1.000 - - - - - - 0.729
28. vgf ENSDARG00000105529 247 1.722 - 0.906 - - - 0.816 - - - VGF nerve growth factor inducible [Source:ZFIN;Acc:ZDB-GENE-121009-2]
29. unc119b ENSDARG00000044362 1528 1.711 - - - - - - - 0.954 0.757 unc-119 homolog b (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-050201-2]
30. elovl4a ENSDARG00000006773 412 1.709 - - - - - - - 0.983 0.726 ELOVL fatty acid elongase 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1767]
31. atp6v0a1b ENSDARG00000015174 1052 1.694 - - - - - 0.748 - 0.946 - ATPase H+ transporting V0 subunit a1b [Source:ZFIN;Acc:ZDB-GENE-050522-215]
32. six6b ENSDARG00000031316 132 1.688 - - - - 0.894 - - - 0.794 SIX homeobox 6b [Source:ZFIN;Acc:ZDB-GENE-050522-308]
33. olfm1b ENSDARG00000014053 1392 1.683 - - - - - 0.711 - 0.972 - olfactomedin 1b [Source:ZFIN;Acc:ZDB-GENE-040801-228]
34. foxg1a ENSDARG00000070769 928 1.674 - - 0.932 - 0.742 - - - - forkhead box G1a [Source:ZFIN;Acc:ZDB-GENE-990415-267]
35. CR759907.4 CR759907.4 14 1.646 - - - - - 0.931 - - 0.715
36. lhx2b ENSDARG00000031222 517 1.644 - - 0.830 - - - - - 0.814 LIM homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-051220-1]
37. SPOCK1 ENSDARG00000074644 794 1.64 - 0.850 - - - 0.790 - - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
38. npvf ENSDARG00000036227 23 1.632 - - 0.747 0.885 - - - - - neuropeptide VF precursor [Source:ZFIN;Acc:ZDB-GENE-070424-226]
39. rab42a ENSDARG00000034215 692 1.628 - 0.712 - - - 0.916 - - - RAB42, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-040426-1983]
40. lhx8a ENSDARG00000002330 25 1.628 - - - 0.815 0.813 - - - - LIM homeobox 8a [Source:ZFIN;Acc:ZDB-GENE-031008-2]
41. tmeff1b ENSDARG00000056740 11253 1.623 - - - - - 0.809 - 0.814 - transmembrane protein with EGF-like and two follistatin-like domains 1b [Source:ZFIN;Acc:ZDB-GENE-050706-143]
42. CDH12 CDH12 44 1.622 - 0.747 - - - 0.875 - - -
43. tbr1a ENSDARG00000076259 341 1.621 - 0.712 - - - - - 0.909 - T-box, brain, 1a [Source:ZFIN;Acc:ZDB-GENE-060810-93]
44. SCML2 ENSDARG00000012949 1310 1.617 - - - - - - - 0.907 0.710 Scm polycomb group protein like 2 [Source:ZFIN;Acc:ZDB-GENE-130530-546]
45. prox1b ENSDARG00000088810, ENSDARG00000113014 33 1.599 - - - - 0.755 0.844 - - - prospero homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050107-3]
46. basp1 ENSDARG00000053358, ENSDARG00000110677 2590 1.588 - - - - - 0.723 - 0.865 - brain abundant, membrane attached signal protein 1 [Source:ZFIN;Acc:ZDB-GENE-070424-158]
47. chd4a ENSDARG00000063535, ENSDARG00000111791 4059 1.558 - - - - - 0.708 - 0.850 - chromodomain helicase DNA binding protein 4a [Source:ZFIN;Acc:ZDB-GENE-041111-187]
48. KCTD5 KCTD5 109 1.556 - - - - - 0.797 - - 0.759
49. purg ENSDARG00000099187, ENSDARG00000114450 33 1.55 - 0.729 - - - 0.821 - - - purine-rich element binding protein G [Source:ZFIN;Acc:ZDB-GENE-070702-3]
50. fzd8b ENSDARG00000038569, ENSDARG00000110687 52 1.549 - - - - 0.842 0.707 - - - frizzled class receptor 8b [Source:ZFIN;Acc:ZDB-GENE-000328-4]
51. CR678040.1 CR678040.1 117 1.542 - 0.721 - - - 0.821 - - -
52. tmpob ENSDARG00000022978 8121 1.54 - - - - - - - 0.808 0.732 thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
53. trim9 ENSDARG00000039123 53 1.538 - - - - 0.717 0.821 - - - tripartite motif containing 9 [Source:ZFIN;Acc:ZDB-GENE-030131-8043]
54. dync1i1 ENSDARG00000060948 554 1.528 - 0.720 - - - 0.808 - - - dynein, cytoplasmic 1, intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-061215-62]
55. si:dkey-235h8.1 si:dkey-235h8.1 2457 1.522 - - 0.818 - - - - - 0.704
56. vamp2 ENSDARG00000056877 2158 1.521 - - - - - 0.815 - - 0.706 vesicle-associated membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8225]
57. CT027762.3 CT027762.3 17 1.512 - 0.712 - - 0.800 - - - -
58. sox1b ENSDARG00000008131 379 1.511 - - 0.786 - - 0.725 - - - SRY (sex determining region Y)-box 1b [Source:ZFIN;Acc:ZDB-GENE-060322-5]
59. CBFA2T3 ENSDARG00000079012 6799 1.51 - - - - - 0.745 - 0.765 - core-binding factor, runt domain, alpha subunit 2; translocated to, 3 [Source:ZFIN;Acc:ZDB-GENE-070209-2]
60. cnih2 ENSDARG00000043662, ENSDARG00000110467, ENSDARG00000113176 74 1.502 - - - 0.765 0.737 - - - - cornichon family AMPA receptor auxiliary protein 2 [Source:ZFIN;Acc:ZDB-GENE-050320-96]
61. GABRG1 ENSDARG00000101995 201 1.489 - 0.712 - - - 0.777 - - - gamma-aminobutyric acid type A receptor gamma1 subunit [Source:ZFIN;Acc:ZDB-GENE-141215-66]
62. nkx2.2a ENSDARG00000053298 747 1.474 - 0.749 - 0.725 - - - - - NK2 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-403]
63. nbeaa ENSDARG00000070080 862 1.469 - - - - - 0.757 - - 0.712 neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
64. tmem35 ENSDARG00000052567 5685 1.462 - - - - - 0.728 - - 0.734 transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
65. runx1t1 ENSDARG00000003680 633 1.457 - - - - - 0.718 - - 0.739 runt-related transcription factor 1; translocated to, 1 (cyclin D-related) [Source:ZFIN;Acc:ZDB-GENE-060929-164]
66. MSANTD2 ENSDARG00000079474 121 1.45 - 0.705 - - - 0.745 - - - Myb/SANT DNA binding domain containing 2 [Source:HGNC Symbol;Acc:HGNC:26266]
67. negr1 ENSDARG00000021607 1051 1.442 - - - - - 0.706 - - 0.736 neuronal growth regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040822-27]
68. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 1.43 - - - - - 0.729 - - 0.701 cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
69. edaradd ENSDARG00000062289 66 1 - 1.000 - - - - - - - EDAR-associated death domain [Source:ZFIN;Acc:ZDB-GENE-050114-5]
70. U6_11 U6_11 0 1 - 1.000 - - - - - - -
71. si:dkey-4i23.7 si:dkey-4i23.7 19 1 - 1.000 - - - - - - -
72. tnni3k ENSDARG00000086933 37 1 - 1.000 - - - - - - - TNNI3 interacting kinase [Source:ZFIN;Acc:ZDB-GENE-081104-399]
73. zgc:173837 ENSDARG00000076949 24 1 - 1.000 - - - - - - - zgc:173837 [Source:ZFIN;Acc:ZDB-GENE-080213-12]
74. HIST1H4J_2 HIST1H4J_2 12 1 - 1.000 - - - - - - -
75. fgf9 ENSDARG00000078625 2 1 - 1.000 - - - - - - - fibroblast growth factor 9 [Source:ZFIN;Acc:ZDB-GENE-070424-238]
76. MSH4 ENSDARG00000075826 37 1 - 1.000 - - - - - - - mutS homolog 4 [Source:ZFIN;Acc:ZDB-GENE-131121-643]
77. CDCP1 ENSDARG00000110186 0 1 - 1.000 - - - - - - - CUB domain containing protein 1 [Source:HGNC Symbol;Acc:HGNC:24357]
78. arih1l ENSDARG00000036870, ENSDARG00000112965 82 1 - 1.000 - - - - - - - ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2395]
79. nudt6 ENSDARG00000103523 64 1 - 1.000 - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 6 [Source:ZFIN;Acc:ZDB-GENE-070410-44]
80. drd2a ENSDARG00000056926 40 1 - 1.000 - - - - - - - dopamine receptor D2a [Source:ZFIN;Acc:ZDB-GENE-021119-2]
81. si:dkey-54i3.3_2 si:dkey-54i3.3_2 59 1 - 1.000 - - - - - - -
82. fgd5a ENSDARG00000088801 3 1 - 1.000 - - - - - - - FYVE, RhoGEF and PH domain containing 5a [Source:ZFIN;Acc:ZDB-GENE-090428-3]
83. CU467646.1 ENSDARG00000075090 27 1 - 1.000 - - - - - - - mucin-5AC-like [Source:NCBI gene;Acc:110439410]
84. si:ch211-106h4.4 ENSDARG00000093629 9 1 - 1.000 - - - - - - - si:ch211-106h4.4 [Source:ZFIN;Acc:ZDB-GENE-070705-14]
85. cpb1 ENSDARG00000045442, ENSDARG00000110762 22 1 - 1.000 - - - - - - - carboxypeptidase B1 (tissue) [Source:ZFIN;Acc:ZDB-GENE-030131-1132]
86. echdc1 68 1 - 1.000 - - - - - - - enoyl CoA hydratase domain containing 1, transcript variant 1
87. derl3 ENSDARG00000033871, ENSDARG00000114961 36 1 - 1.000 - - - - - - - derlin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1324]
88. rasl12 ENSDARG00000002701 66 1 - 1.000 - - - - - - - RAS-like, family 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1201]
89. ftr56 ENSDARG00000030954 23 1 - 1.000 - - - - - - - finTRIM family, member 56 [Source:ZFIN;Acc:ZDB-GENE-030131-2801]
90. elk4 ENSDARG00000077092 19 1 - 1.000 - - - - - - - ELK4, ETS-domain protein [Source:ZFIN;Acc:ZDB-GENE-030716-1]
91. si:rp71-45g20.6 si:rp71-45g20.6 19 1 - 1.000 - - - - - - -
92. eno4 ENSDARG00000070598 78 1 - 1.000 - - - - - - - enolase 4 [Source:ZFIN;Acc:ZDB-GENE-061013-677]
93. slc22a7b slc22a7b 11 1 - 1.000 - - - - - - -
94. syndig1l ENSDARG00000042390, ENSDARG00000113400 17 1 - 1.000 - - - - - - - synapse differentiation inducing 1-like [Source:ZFIN;Acc:ZDB-GENE-041001-116]
95. zgc:198241 ENSDARG00000076483, ENSDARG00000116081 3 1 - 1.000 - - - - - - - zgc:198241 [Source:ZFIN;Acc:ZDB-GENE-080303-14]
96. APEX2 ENSDARG00000008472 7 1 - 1.000 - - - - - - - APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Source:ZFIN;Acc:ZDB-GENE-040426-835]
97. inpp5d ENSDARG00000074283, ENSDARG00000116834 12 1 - 1.000 - - - - - - - inositol polyphosphate-5-phosphatase D [Source:ZFIN;Acc:ZDB-GENE-100922-30]
98. si:ch211-281p14.2 22 1 - 1.000 - - - - - - - si:ch211-281p14.2, transcript variant X2
99. DLK1 60 1 - 1.000 - - - - - - - delta like non-canonical Notch ligand 1
100. lgals3bpa ENSDARG00000037805 2 1 - 1.000 - - - - - - - lectin, galactoside-binding, soluble, 3 binding protein a [Source:ZFIN;Acc:ZDB-GENE-060331-57]

There are 1285 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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