Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for APEX2

Gene Name Gene ID Reads Annotation
APEX2 ENSDARG00000008472 7 APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Source:ZFIN;Acc:ZDB-GENE-040426-835]










Genes with expression patterns similar to APEX2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. APEX2 ENSDARG00000008472 7 5 1.000 1.000 1.000 1.000 - - - - 1.000 APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Source:ZFIN;Acc:ZDB-GENE-040426-835]
2. zgc:193690 34 1.912 0.912 1.000 - - - - - - - zgc:193690
3. SLC28A2 SLC28A2 21 1.91 1.000 0.910 - - - - - - -
4. SYNDIG1 ENSDARG00000100751 165 1.88 0.880 1.000 - - - - - - - synapse differentiation inducing 1 [Source:HGNC Symbol;Acc:HGNC:15885]
5. DBNDD1 DBNDD1 43 1.866 0.866 1.000 - - - - - - -
6. si:ch1073-185p12.2 ENSDARG00000100199 7 1.83 0.830 1.000 - - - - - - - si:ch1073-185p12.2 [Source:ZFIN;Acc:ZDB-GENE-110411-196]
7. FP102786.1 ENSDARG00000090551 3 1.818 - 1.000 - 0.818 - - - - - GTPase IMAP family member 8-like [Source:NCBI gene;Acc:101882698]
8. fermt3b ENSDARG00000030938 17 1.805 1.000 0.805 - - - - - - - fermitin family member 3b [Source:ZFIN;Acc:ZDB-GENE-040426-1366]
9. si:ch211-255g12.8 ENSDARG00000069627 22 1.781 1.000 - - 0.781 - - - - - si:ch211-255g12.8 [Source:ZFIN;Acc:ZDB-GENE-081104-39]
10. snrnp35 ENSDARG00000099913 21 1.771 1.000 - - - - - - - 0.771 small nuclear ribonucleoprotein 35 (U11/U12) [Source:ZFIN;Acc:ZDB-GENE-050706-77]
11. C21H11orf82 C21H11orf82 50 1.723 0.723 1.000 - - - - - - -
12. si:ch73-338a16.3 ENSDARG00000101159 18 1.712 0.878 0.834 - - - - - - - si:ch73-338a16.3 [Source:ZFIN;Acc:ZDB-GENE-120215-227]
13. CACNA1H CACNA1H 34 1.64 0.923 - 0.717 - - - - - -
14. si:dkey-115f9.3 7 1.576 - - 0.717 - - - - - 0.859 si:dkey-115f9.3, transcript variant X2
15. bbs4 ENSDARG00000063522 247 1.563 0.741 - - - - - - - 0.822 Bardet-Biedl syndrome 4 [Source:ZFIN;Acc:ZDB-GENE-060126-2]
16. tbr1a ENSDARG00000076259 341 1.561 0.849 0.712 - - - - - - - T-box, brain, 1a [Source:ZFIN;Acc:ZDB-GENE-060810-93]
17. abca4a ENSDARG00000057169 27 1.551 - 0.729 - 0.822 - - - - - ATP-binding cassette, sub-family A (ABC1), member 4a [Source:ZFIN;Acc:ZDB-GENE-050517-3]
18. myca ENSDARG00000045695 582 1.44 0.722 - - 0.718 - - - - - MYC proto-oncogene, bHLH transcription factor a [Source:ZFIN;Acc:ZDB-GENE-990415-162]
19. CABZ01038708.1 CABZ01038708.1 28 1 - 1.000 - - - - - - -
20. FP236162.1 FP236162.1 2 1 - 1.000 - - - - - - -
21. aqp8a.2 ENSDARG00000071592, ENSDARG00000113224 7 1 1.000 - - - - - - - - aquaporin 8a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1802]
22. C2CD4A ENSDARG00000061416 61 1 - 1.000 - - - - - - - C2 calcium dependent domain containing 4A [Source:ZFIN;Acc:ZDB-GENE-030131-5712]
23. sphkap ENSDARG00000017429 60 1 - 1.000 - - - - - - - SPHK1 interactor, AKAP domain containing [Source:ZFIN;Acc:ZDB-GENE-050419-32]
24. slc17a8 ENSDARG00000057728, ENSDARG00000109791 8 1 - 1.000 - - - - - - - solute carrier family 17 (vesicular glutamate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-060503-416]
25. rcv1 rcv1 77 1 - 1.000 - - - - - - -
26. si:ch211-73m21.2 si:ch211-73m21.2 5 1 1.000 - - - - - - - -
27. ctskl ctskl 17 1 - 1.000 - - - - - - -
28. cacna1c ENSDARG00000008398 193 1 - 1.000 - - - - - - - calcium channel, voltage-dependent, L type, alpha 1C subunit [Source:ZFIN;Acc:ZDB-GENE-020129-1]
29. gria3b ENSDARG00000037498, ENSDARG00000111839 2 1 - 1.000 - - - - - - - glutamate receptor, ionotropic, AMPA 3b [Source:ZFIN;Acc:ZDB-GENE-030616-53]
30. si:dkey-77f17.1 si:dkey-77f17.1 83 1 - 1.000 - - - - - - -
31. scara3 ENSDARG00000008060 169 1 - 1.000 - - - - - - - scavenger receptor class A, member 3 [Source:ZFIN;Acc:ZDB-GENE-041014-317]
32. CR753817.1 ENSDARG00000110927 26 1 - 1.000 - - - - - - -
33. rxrga ENSDARG00000005593 342 1 1.000 - - - - - - - - retinoid x receptor, gamma a [Source:ZFIN;Acc:ZDB-GENE-980526-36]
34. chrnb1l ENSDARG00000022532, ENSDARG00000113943, ENSDARG00000116196 3 1 - 1.000 - - - - - - - cholinergic receptor, nicotinic, beta 1 (muscle) like [Source:ZFIN;Acc:ZDB-GENE-060811-1]
35. BIN3 ENSDARG00000099651 5 1 - 1.000 - - - - - - - bridging integrator 3 [Source:ZFIN;Acc:ZDB-GENE-030131-2696]
36. CU928220.1 CU928220.1 146 1 - 1.000 - - - - - - -
37. CU694952.2 CU694952.2 3 1 - 1.000 - - - - - - -
38. slc18b1 ENSDARG00000044047 7 1 - 1.000 - - - - - - - solute carrier family 18, subfamily B, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-386]
39. rnf217 ENSDARG00000060944 10 1 - 1.000 - - - - - - - ring finger protein 217 [Source:ZFIN;Acc:ZDB-GENE-060503-400]
40. chia.3 ENSDARG00000009612 14 1 - 1.000 - - - - - - - chitinase, acidic.3 [Source:ZFIN;Acc:ZDB-GENE-040426-2891]
41. CABZ01054394.1 ENSDARG00000090942 12 1 - 1.000 - - - - - - - gastrula zinc finger protein XlCGF26.1-like [Source:NCBI gene;Acc:101885996]
42. IQCK ENSDARG00000076831, ENSDARG00000112508 6 1 - 1.000 - - - - - - - IQ motif containing K [Source:ZFIN;Acc:ZDB-GENE-081022-109]
43. mpx ENSDARG00000019521 562 1 1.000 - - - - - - - - myeloid-specific peroxidase [Source:ZFIN;Acc:ZDB-GENE-030131-9460]
44. cdkn1bb_1 ENSDARG00000054271 5 1 1.000 - - - - - - - - cyclin-dependent kinase inhibitor 1Bb [Source:ZFIN;Acc:ZDB-GENE-030521-13]
45. GPR82 GPR82 127 1 - 1.000 - - - - - - -
46. ZNF337_23 ZNF337_23 39 1 - 1.000 - - - - - - -
47. EDN3 14 1 - 1.000 - - - - - - - endothelin 3
48. CCNO 21 1 - 1.000 - - - - - - - cyclin O
49. PPP2R5B ENSDARG00000054931 213 1 - 1.000 - - - - - - - protein phosphatase 2, regulatory subunit B', beta [Source:ZFIN;Acc:ZDB-GENE-101208-1]
50. cspg5b ENSDARG00000099793 67 1 - 1.000 - - - - - - - chondroitin sulfate proteoglycan 5b [Source:ZFIN;Acc:ZDB-GENE-060503-368]
51. BX000701.3 BX000701.3 4 1 - 1.000 - - - - - - -
52. si:ch211-155e24.5 si:ch211-155e24.5 2 1 - 1.000 - - - - - - -
53. GRIN3A ENSDARG00000075802 27 1 - 1.000 - - - - - - - glutamate receptor, ionotropic, N-methyl-D-aspartate 3A [Source:ZFIN;Acc:ZDB-GENE-130530-780]
54. cart1 ENSDARG00000070930 46 1 1.000 - - - - - - - - cocaine- and amphetamine-regulated transcript 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8025]
55. st6galnac1.1 ENSDARG00000043814 95 1 - 1.000 - - - - - - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-041014-160]
56. CABZ01080224.1 CABZ01080224.1 1 1 1.000 - - - - - - - -
57. s100t ENSDARG00000055589 453 1 - 1.000 - - - - - - - S100 calcium binding protein T [Source:ZFIN;Acc:ZDB-GENE-050320-61]
58. C24H8orf34 C24H8orf34 1 1 - 1.000 - - - - - - -
59. slc43a3a ENSDARG00000059682 27 1 - 1.000 - - - - - - - solute carrier family 43, member 3a [Source:ZFIN;Acc:ZDB-GENE-110208-8]
60. CABZ01088365.1 CABZ01088365.1 66 1 - 1.000 - - - - - - -
61. CR848836.6 CR848836.6 93 1 - 1.000 - - - - - - -
62. USH1G USH1G 25 1 - 1.000 - - - - - - -
63. mir457b 21 1 - 1.000 - - - - - - - microRNA 457b
64. si:dkey-58b18.10 ENSDARG00000109911, ENSDARG00000113007, ENSDARG00000116868 4 1 1.000 - - - - - - - - si:dkey-58b18.10 [Source:ZFIN;Acc:ZDB-GENE-070912-560]
65. si:ch211-268b13.3 si:ch211-268b13.3 28 1 - 1.000 - - - - - - -
66. si:dkey-88e10.2 si:dkey-88e10.2 7 1 - 1.000 - - - - - - -
67. jam3a ENSDARG00000114589 630 1 - 1.000 - - - - - - - junctional adhesion molecule 3a [Source:ZFIN;Acc:ZDB-GENE-070424-177]
68. si:dkey-272j9.4 si:dkey-272j9.4 2 1 - 1.000 - - - - - - -
69. thap7 ENSDARG00000070704 225 1 1.000 - - - - - - - - THAP domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040914-84]
70. si:ch211-15o14.2 si:ch211-15o14.2 6 1 - 1.000 - - - - - - -
71. mir21-2 18 1 - 1.000 - - - - - - - microRNA 21-2
72. crha ENSDARG00000093401 1 1 1.000 - - - - - - - - corticotropin releasing hormone a [Source:ZFIN;Acc:ZDB-GENE-070912-371]
73. polg ENSDARG00000060951 33 1 - 1.000 - - - - - - - polymerase (DNA directed), gamma [Source:ZFIN;Acc:ZDB-GENE-060303-1]
74. sdhda ENSDARG00000055712 50 1 - 1.000 - - - - - - - succinate dehydrogenase complex, subunit D, integral membrane protein a [Source:ZFIN;Acc:ZDB-GENE-040718-192]
75. matn3a ENSDARG00000069245 2410 1 - 1.000 - - - - - - - matrilin 3a [Source:ZFIN;Acc:ZDB-GENE-040822-21]
76. si:ch211-208f21.1 si:ch211-208f21.1 1 1 - 1.000 - - - - - - -
77. bbs10 ENSDARG00000069515, ENSDARG00000110925 36 1 - 1.000 - - - - - - - Bardet-Biedl syndrome 10 [Source:ZFIN;Acc:ZDB-GENE-060503-355]
78. si:dkey-65b12.12 ENSDARG00000094458 26 1 - 1.000 - - - - - - - si:dkey-65b12.12 [Source:ZFIN;Acc:ZDB-GENE-060526-325]
79. si:ch73-44m9.3 ENSDARG00000040640, ENSDARG00000100357 3 1 - 1.000 - - - - - - - si:ch73-44m9.3 [Source:ZFIN;Acc:ZDB-GENE-081104-290]
80. prf1.3 ENSDARG00000001572 1 1 1.000 - - - - - - - - perforin 1.3 [Source:ZFIN;Acc:ZDB-GENE-060503-461]
81. CABZ01112331.1 CABZ01112331.1 9 1 - 1.000 - - - - - - -
82. CABZ01087946.1 CABZ01087946.1 2 1 - 1.000 - - - - - - -
83. TOR4A TOR4A 70 1 1.000 - - - - - - - -
84. si:dkey-54i3.2 si:dkey-54i3.2 1 1 1.000 - - - - - - - -
85. taok3b ENSDARG00000094052 36 1 - 1.000 - - - - - - - TAO kinase 3b [Source:ZFIN;Acc:ZDB-GENE-060526-59]
86. si:ch73-289h5.1 si:ch73-289h5.1 2 1 - 1.000 - - - - - - -
87. fgf10b ENSDARG00000100475 17 1 1.000 - - - - - - - - fibroblast growth factor 10b [Source:ZFIN;Acc:ZDB-GENE-060828-1]
88. si:ch211-155o21.4 ENSDARG00000096567 25 1 1.000 - - - - - - - - si:ch211-155o21.4 [Source:ZFIN;Acc:ZDB-GENE-121214-169]
89. wu:fb37b09 wu:fb37b09 10685 1 - 1.000 - - - - - - -
90. si:ch73-59c19.1 ENSDARG00000091909 64 1 - 1.000 - - - - - - - si:ch73-59c19.1 [Source:ZFIN;Acc:ZDB-GENE-100922-247]
91. si:dkeyp-35e5.9 ENSDARG00000103527 24 1 - 1.000 - - - - - - - si:dkeyp-35e5.9 [Source:ZFIN;Acc:ZDB-GENE-110913-107]
92. fam213ab 1 1 - 1.000 - - - - - - - family with sequence similarity 213, member Ab
93. zgc:172079 ENSDARG00000056762, ENSDARG00000077644, ENSDARG00000105644 102 1 - 1.000 - - - - - - - zgc:172079 [Source:ZFIN;Acc:ZDB-GENE-080204-103]
94. GABRR1 ENSDARG00000043902 71 1 - 1.000 - - - - - - - gamma-aminobutyric acid (GABA) A receptor, rho 1 [Source:ZFIN;Acc:ZDB-GENE-040724-212]
95. arid5a ENSDARG00000077120 26 1 1.000 - - - - - - - - AT rich interactive domain 5A (MRF1-like) [Source:ZFIN;Acc:ZDB-GENE-100525-3]
96. KLF10 1 1 - 1.000 - - - - - - - Kruppel-like factor 10
97. si:dkey-30j10.5 ENSDARG00000093186 13 1 1.000 - - - - - - - - si:dkey-30j10.5 [Source:ZFIN;Acc:ZDB-GENE-091118-81]
98. BX927317.2 ENSDARG00000101263 4 1 - 1.000 - - - - - - -
99. si:dkey-70b24.7 si:dkey-70b24.7 5 1 - 1.000 - - - - - - -
100. gpr39 ENSDARG00000102888 46 1 1.000 - - - - - - - - G protein-coupled receptor 39 [Source:ZFIN;Acc:ZDB-GENE-040426-1395]

There are 795 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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