Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:dkey-3h2.4

Gene Name Gene ID Reads Annotation
si:dkey-3h2.4 ENSDARG00000086179, ENSDARG00000098444 88 si:dkey-3h2.4 [Source:ZFIN;Acc:ZDB-GENE-070705-466]










Genes with expression patterns similar to si:dkey-3h2.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-3h2.4 ENSDARG00000086179, ENSDARG00000098444 88 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:dkey-3h2.4 [Source:ZFIN;Acc:ZDB-GENE-070705-466]
2. KHDRBS3 ENSDARG00000101020 408 1.582 - - - 0.777 0.805 - - - - KH RNA binding domain containing, signal transduction associated 3 [Source:HGNC Symbol;Acc:HGNC:18117]
3. tgm5l ENSDARG00000098837 174 1.556 - - - 0.714 0.842 - - - - transglutaminase 5, like [Source:ZFIN;Acc:ZDB-GENE-110411-176]
4. ACBD3 ENSDARG00000042623 159 1.553 - - - 0.757 0.796 - - - - acyl-Coenzyme A binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1930]
5. ncam1b ENSDARG00000007220 233 1.543 - - - 0.841 - - 0.702 - - neural cell adhesion molecule 1b [Source:ZFIN;Acc:ZDB-GENE-010822-2]
6. KDM4C ENSDARG00000061504, ENSDARG00000111347, ENSDARG00000114179 383 1.54 - - - - 0.706 - 0.834 - - lysine (K)-specific demethylase 4C [Source:ZFIN;Acc:ZDB-GENE-070209-38]
7. par1 par1 564 1.498 - - - 0.781 - - 0.717 - -
8. eva1bb ENSDARG00000100698 223 1.491 - - - 0.728 - - 0.763 - - eva-1 homolog Bb (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-080204-108]
9. adrbk2 1037 1.48 - - - 0.726 0.754 - - - - adrenergic, beta, receptor kinase 2, transcript variant X1
10. MAP4 MAP4 315 1.424 - - - - 0.721 - 0.703 - -
11. chst14 ENSDARG00000043011 345 0.933 - - - 0.933 - - - - - carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14 [Source:ZFIN;Acc:ZDB-GENE-040401-3]
12. hs3st1 82 0.921 - - - 0.921 - - - - - heparan sulfate (glucosamine) 3-O-sulfotransferase 1, transcript variant X1
13. dph1 ENSDARG00000057973 191 0.91 - - - - - - 0.910 - - diphthamide biosynthesis 1 [Source:ZFIN;Acc:ZDB-GENE-050417-411]
14. krt1-c5 ENSDARG00000026979 325 0.902 - - - 0.902 - - - - - keratin, type 1, gene c5 [Source:ZFIN;Acc:ZDB-GENE-060316-3]
15. klhl32 ENSDARG00000003576 99 0.902 - - - - - - 0.902 - - kelch-like family member 32 [Source:ZFIN;Acc:ZDB-GENE-070209-47]
16. abl2 ENSDARG00000013841 145 0.899 - - - 0.899 - - - - - c-abl oncogene 2, non-receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-020809-2]
17. TMEM150A_1 TMEM150A_1 90 0.896 - - - - 0.896 - - - -
18. CR450842.1 CR450842.1 129 0.894 - - - - 0.894 - - - -
19. mei4 ENSDARG00000043912 10 0.894 - - - 0.894 - - - - - meiosis-specific, MEI4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040724-211]
20. parp12a ENSDARG00000042496 82 0.892 - - - 0.892 - - - - - poly (ADP-ribose) polymerase family, member 12a [Source:ZFIN;Acc:ZDB-GENE-050419-6]
21. BX004816.4 BX004816.4 33 0.892 - - - 0.892 - - - - -
22. UBXN11 ENSDARG00000053828 22 0.892 - - - 0.892 - - - - - UBX domain protein 11 [Source:ZFIN;Acc:ZDB-GENE-100922-125]
23. smyd4 ENSDARG00000060983 106 0.891 - - - - 0.891 - - - - SET and MYND domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060929-248]
24. nmnat1 ENSDARG00000105748 102 0.891 - - - 0.891 - - - - - nicotinamide nucleotide adenylyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-101]
25. RNF39 RNF39 52 0.889 - - - 0.889 - - - - -
26. coe2 coe2 1633 0.889 - - - - - - 0.889 - -
27. KCNB2 ENSDARG00000088842 35 0.887 - - - 0.887 - - - - - potassium voltage-gated channel subfamily B member 2 [Source:HGNC Symbol;Acc:HGNC:6232]
28. arntl2 ENSDARG00000041381, ENSDARG00000109690, ENSDARG00000116327 56 0.886 - - - 0.886 - - - - - aryl hydrocarbon receptor nuclear translocator-like 2 [Source:ZFIN;Acc:ZDB-GENE-000509-2]
29. dusp16 ENSDARG00000102474 193 0.886 - - - - 0.886 - - - - dual specificity phosphatase 16 [Source:ZFIN;Acc:ZDB-GENE-040426-2360]
30. CR790368.1 ENSDARG00000100936 20 0.886 - - - 0.886 - - - - - uncharacterized LOC110440102 [Source:NCBI gene;Acc:110440102]
31. CIR1 ENSDARG00000099733 66 0.886 - - - 0.886 - - - - - corepressor interacting with RBPJ, 1 [Source:HGNC Symbol;Acc:HGNC:24217]
32. coro2ba ENSDARG00000079440 420 0.885 - - - 0.885 - - - - - coronin, actin binding protein, 2Ba [Source:ZFIN;Acc:ZDB-GENE-050518-1]
33. SERINC3 SERINC3 21 0.884 - - - 0.884 - - - - -
34. C17H15orf41 C17H15orf41 313 0.882 - - - 0.882 - - - - -
35. amh ENSDARG00000014357 15 0.882 - - - 0.882 - - - - - anti-Mullerian hormone [Source:ZFIN;Acc:ZDB-GENE-050706-192]
36. map4k2l_1 map4k2l_1 77 0.881 - - - 0.881 - - - - -
37. grxcr1 ENSDARG00000069865 22 0.88 - - - 0.880 - - - - - glutaredoxin, cysteine rich 1 [Source:ZFIN;Acc:ZDB-GENE-070424-166]
38. gpr22 gpr22 115 0.876 - - - 0.876 - - - - -
39. ARHGAP42 ARHGAP42 53 0.876 - - - 0.876 - - - - -
40. PEX5L PEX5L 179 0.875 - - - 0.875 - - - - -
41. camk1db ENSDARG00000017446 47 0.875 - - - 0.875 - - - - - calcium/calmodulin-dependent protein kinase 1Db [Source:ZFIN;Acc:ZDB-GENE-070112-1872]
42. ches1 ENSDARG00000043553 96 0.873 - - - 0.873 - - - - - checkpoint suppressor 1 [Source:ZFIN;Acc:ZDB-GENE-040217-1]
43. si:dkey-17e6.2 si:dkey-17e6.2 72 0.873 - - - 0.873 - - - - -
44. prkag3a ENSDARG00000017537 219 0.872 - - - - - - 0.872 - - protein kinase, AMP-activated, gamma 3a non-catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-091204-419]
45. Metazoa_SRP_19 Metazoa_SRP_19 17 0.872 - - - 0.872 - - - - -
46. megf6a ENSDARG00000079199 103 0.871 - - - 0.871 - - - - - multiple EGF-like-domains 6a [Source:ZFIN;Acc:ZDB-GENE-090312-12]
47. si:ch211-255g12.9 si:ch211-255g12.9 78 0.87 - - - 0.870 - - - - -
48. npdc1 npdc1 221 0.87 - - - 0.870 - - - - -
49. atp2b1b ENSDARG00000007788 56 0.869 - - - 0.869 - - - - - ATPase plasma membrane Ca2+ transporting 1b [Source:ZFIN;Acc:ZDB-GENE-080409-1]
50. si:ch211-196f5.9 ENSDARG00000096451 70 0.867 - - - 0.867 - - - - - si:ch211-196f5.9 [Source:ZFIN;Acc:ZDB-GENE-120709-32]
51. BX088603.3 ENSDARG00000117713 18 0.867 - - - 0.867 - - - - -
52. MTERFD2 MTERFD2 140 0.866 - - - - 0.866 - - - -
53. ube2d4 ENSDARG00000015057 1089 0.866 - - - - - - 0.866 - - ubiquitin-conjugating enzyme E2D 4 (putative) [Source:ZFIN;Acc:ZDB-GENE-070424-86]
54. SMARCA4 ENSDARG00000104339 48 0.864 - - - 0.864 - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:HGNC Symbol;Acc:HGNC:11100]
55. CU463790.1 CU463790.1 60 0.864 - - - 0.864 - - - - -
56. med24 ENSDARG00000099431 893 0.863 - - - - - - 0.863 - - mediator complex subunit 24 [Source:ZFIN;Acc:ZDB-GENE-030131-2341]
57. rassf4 ENSDARG00000012460 43 0.862 - - - 0.862 - - - - - Ras association (RalGDS/AF-6) domain family member 4 [Source:ZFIN;Acc:ZDB-GENE-050102-3]
58. luzp2 ENSDARG00000068247 80 0.861 - - - 0.861 - - - - - leucine zipper protein 2 [Source:ZFIN;Acc:ZDB-GENE-060503-278]
59. ak7b ENSDARG00000017023 25 0.861 - - - 0.861 - - - - - adenylate kinase 7b [Source:ZFIN;Acc:ZDB-GENE-050309-170]
60. d2hgdh ENSDARG00000060210 362 0.86 - - - 0.860 - - - - - D-2-hydroxyglutarate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-070112-482]
61. VDR VDR 489 0.858 - - - 0.858 - - - - -
62. FAM35A FAM35A 1091 0.858 - - - - 0.858 - - - -
63. pigc ENSDARG00000009113 253 0.856 - - - 0.856 - - - - - phosphatidylinositol glycan anchor biosynthesis, class C [Source:ZFIN;Acc:ZDB-GENE-030131-2714]
64. megf11 ENSDARG00000062686 230 0.855 - - - 0.855 - - - - - multiple EGF-like-domains 11 [Source:ZFIN;Acc:ZDB-GENE-060503-252]
65. CLRN2 ENSDARG00000070321, ENSDARG00000110932 42 0.855 - - - 0.855 - - - - - clarin 2 [Source:ZFIN;Acc:ZDB-GENE-061207-64]
66. wdr73 ENSDARG00000023152, ENSDARG00000111497 217 0.853 - - - - - 0.853 - - - WD repeat domain 73 [Source:ZFIN;Acc:ZDB-GENE-050417-126]
67. bmp3 ENSDARG00000060526, ENSDARG00000109238 54 0.851 - - - 0.851 - - - - - bone morphogenetic protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7192]
68. arhgef28 ENSDARG00000060415 142 0.851 - - - 0.851 - - - - - Rho guanine nucleotide exchange factor (GEF) 28 [Source:ZFIN;Acc:ZDB-GENE-060531-28]
69. ubxn8 ENSDARG00000098902, ENSDARG00000113836 152 0.848 - - - 0.848 - - - - - UBX domain protein 8 [Source:ZFIN;Acc:ZDB-GENE-050522-266]
70. gmcl1 ENSDARG00000020948 261 0.845 - - - - 0.845 - - - - germ cell-less, spermatogenesis associated 1 [Source:ZFIN;Acc:ZDB-GENE-030131-865]
71. tgm2l ENSDARG00000093381 218 0.845 - - - 0.845 - - - - - transglutaminase 2, like [Source:ZFIN;Acc:ZDB-GENE-050420-97]
72. slc16a6a ENSDARG00000102793 60 0.845 - - - - 0.845 - - - - solute carrier family 16, member 6a [Source:ZFIN;Acc:ZDB-GENE-110208-1]
73. MAP1S_1 MAP1S_1 1117 0.844 - - - 0.844 - - - - -
74. si:ch211-225b11.4 ENSDARG00000093563 42 0.843 - - - 0.843 - - - - - si:ch211-225b11.4 [Source:ZFIN;Acc:ZDB-GENE-060526-114]
75. CR318603.2 ENSDARG00000105536 199 0.842 - - - - - - 0.842 - -
76. CT573393.1 CT573393.1 97 0.841 - - - 0.841 - - - - -
77. mir457b 21 0.84 - - - - 0.840 - - - - microRNA 457b
78. zgc:158852 ENSDARG00000102076 65 0.84 - - - - 0.840 - - - - zgc:158852 [Source:ZFIN;Acc:ZDB-GENE-070112-972]
79. elf2a ENSDARG00000019459 655 0.84 - - - 0.840 - - - - - E74-like factor 2a (ets domain transcription factor) [Source:ZFIN;Acc:ZDB-GENE-040822-41]
80. si:ch211-199m9.3 50 0.839 - - - 0.839 - - - - - si:ch211-199m9.3, transcript variant X3
81. MAP4K2 ENSDARG00000001234 39 0.838 - - - - 0.838 - - - - mitogen-activated protein kinase kinase kinase kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030616-163]
82. GTPBP6 ENSDARG00000061091 29 0.838 - - - - 0.838 - - - - GTP binding protein 6 (putative) [Source:ZFIN;Acc:ZDB-GENE-031118-62]
83. CR788231.1 CR788231.1 61 0.838 - - - 0.838 - - - - -
84. gpr88 24 0.837 - - - - 0.837 - - - - G protein-coupled receptor 88
85. LRRC61 ENSDARG00000077357 55 0.836 - - - 0.836 - - - - - leucine rich repeat containing 61 [Source:ZFIN;Acc:ZDB-GENE-060616-245]
86. wfikkn2b ENSDARG00000059139 45 0.836 - - - - 0.836 - - - - WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-110414-1]
87. nlgn3a ENSDARG00000104786 91 0.836 - - - 0.836 - - - - - neuroligin 3a [Source:ZFIN;Acc:ZDB-GENE-071219-1]
88. fam188a 275 0.836 - - - 0.836 - - - - - family with sequence similarity 188, member A
89. mthfd2 ENSDARG00000098646, ENSDARG00000112356, ENSDARG00000117060 179 0.836 - - - 0.836 - - - - - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase [Source:ZFIN;Acc:ZDB-GENE-040704-20]
90. ddx26b 79 0.835 - - - - 0.835 - - - - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B, transcript variant X1
91. C5H11orf1 C5H11orf1 78 0.835 - - - - 0.835 - - - -
92. clip2 ENSDARG00000059596 529 0.833 - - - - 0.833 - - - - CAP-GLY domain containing linker protein 2 [Source:ZFIN;Acc:ZDB-GENE-100727-3]
93. pax6l pax6l 54 0.833 - - - - 0.833 - - - -
94. WIPF1 WIPF1 32 0.832 - - - - 0.832 - - - -
95. CU694256.1 ENSDARG00000097007 290 0.832 - - - - 0.832 - - - -
96. ildr2 ENSDARG00000014180 791 0.832 - - - - - - 0.832 - - immunoglobulin-like domain containing receptor 2 [Source:ZFIN;Acc:ZDB-GENE-050706-83]
97. fbxo32 ENSDARG00000040277 93 0.831 - - - 0.831 - - - - - F-box protein 32 [Source:ZFIN;Acc:ZDB-GENE-040426-1040]
98. lef1 ENSDARG00000031894 492 0.831 - - - 0.831 - - - - - lymphoid enhancer-binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-990714-26]
99. shank2 ENSDARG00000062325 66 0.83 - - - - 0.830 - - - - SH3 and multiple ankyrin repeat domains 2 [Source:ZFIN;Acc:ZDB-GENE-061207-58]
100. clock3 clock3 136 0.829 - - - 0.829 - - - - -

There are 407 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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