Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-189d19.1

Gene Name Gene ID Reads Annotation
si:dkey-189d19.1 si:dkey-189d19.1 2










Genes with expression patterns similar to si:dkey-189d19.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-189d19.1 si:dkey-189d19.1 2 3 1.000 - - - 1.000 - - - 1.000
2. ciita ENSDARG00000090851 5 2 1.000 - - - 1.000 - - - - class II, major histocompatibility complex, transactivator [Source:ZFIN;Acc:ZDB-GENE-071116-6]
3. TAF4_1 TAF4_1 30 1.841 1.000 - - - - - - - 0.841
4. si:ch211-170d12.2 si:ch211-170d12.2 1 1 1.000 - - - - - - - -
5. SNORA81_1 SNORA81_1 8 1 1.000 - - - - - - - -
6. katna1 ENSDARG00000021827 221 1 1.000 - - - - - - - - katanin p60 (ATPase containing) subunit A 1 [Source:ZFIN;Acc:ZDB-GENE-050522-514]
7. CU694226.2 CU694226.2 2 1 - - - - - - - - 1.000
8. IMPG2_1 IMPG2_1 2 1 - - - - - - - - 1.000
9. BX465848.1 ENSDARG00000114947 1 1 - - - - - - - - 1.000
10. dmbx1a ENSDARG00000009922 284 1 1.000 - - - - - - - - diencephalon/mesencephalon homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-020117-1]
11. URB1 ENSDARG00000060308 78 1 1.000 - - - - - - - - URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5181]
12. itga2.2 ENSDARG00000062974 27 1 1.000 - - - - - - - - integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor), tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-091118-70]
13. cyp2j20 ENSDARG00000094057 44 1 - - - - - - - - 1.000 cytochrome P450, family 2, subfamily J, polypeptide 20 [Source:ZFIN;Acc:ZDB-GENE-041210-324]
14. armc2 ENSDARG00000022660 3 1 - - - - - - - - 1.000 armadillo repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-041014-7]
15. si:dkeyp-104f11.1 si:dkeyp-104f11.1 1 1 - - - - - - - - 1.000
16. CABZ01076534.1 CABZ01076534.1 1 1 1.000 - - - - - - - -
17. mrc1b ENSDARG00000038822 73 1 1.000 - - - - - - - - mannose receptor, C type 1b [Source:ZFIN;Acc:ZDB-GENE-070705-13]
18. CMA1_9 CMA1_9 1 1 - - - - 1.000 - - - -
19. col10a1 col10a1 19 1 - - - - 1.000 - - - -
20. si:ch211-57f7.7 ENSDARG00000093131 8 1 - - - - - - - - 1.000 si:ch211-57f7.7 [Source:ZFIN;Acc:ZDB-GENE-090313-119]
21. CABZ01085626.1 ENSDARG00000117294 8 1 - - - - - - - - 1.000
22. si:dkey-13a21.4 ENSDARG00000026098, ENSDARG00000113692 87 1 1.000 - - - - - - - - si:dkey-13a21.4 [Source:ZFIN;Acc:ZDB-GENE-040724-163]
23. phox2ba ENSDARG00000075330 1 1 - - - - - - - - 1.000 paired-like homeobox 2ba [Source:ZFIN;Acc:ZDB-GENE-090313-51]
24. si:ch211-240l19.6 ENSDARG00000074613, ENSDARG00000115536 7 1 - - - - 1.000 - - - - si:ch211-240l19.6 [Source:ZFIN;Acc:ZDB-GENE-041210-328]
25. faah2b ENSDARG00000054786, ENSDARG00000112726 10 1 - - - - - - - - 1.000 fatty acid amide hydrolase 2b [Source:ZFIN;Acc:ZDB-GENE-061027-358]
26. 5S_rRNA_10 5S_rRNA_10 2 1 1.000 - - - - - - - -
27. si:dkey-250k15.7 ENSDARG00000095048 1 1 - - - - 1.000 - - - - si:dkey-250k15.7 [Source:ZFIN;Acc:ZDB-GENE-100921-33]
28. vmhcl 119 1 1.000 - - - - - - - - ventricular myosin heavy chain-like
29. il12a ENSDARG00000038878 3 1 - - - - - - - - 1.000 interleukin 12a [Source:ZFIN;Acc:ZDB-GENE-060724-1]
30. BX000701.3 BX000701.3 4 1 1.000 - - - - - - - -
31. cfhl5 ENSDARG00000105052 25 1 1.000 - - - - - - - - complement factor H like 5 [Source:ZFIN;Acc:ZDB-GENE-050208-782]
32. syt7b ENSDARG00000078060 2 1 - - - - 1.000 - - - - synaptotagmin VIIb [Source:ZFIN;Acc:ZDB-GENE-090601-6]
33. ASPG ENSDARG00000052942 1 1 1.000 - - - - - - - - asparaginase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-070820-14]
34. CT990567.1 ENSDARG00000100384 0 1 - - - - - - - - 1.000
35. KLHL38 KLHL38 15 1 1.000 - - - - - - - -
36. ttll3 ENSDARG00000053728 7 1 - - - - - - - - 1.000 tubulin tyrosine ligase-like family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060616-182]
37. BX323854.3 BX323854.3 62 1 1.000 - - - - - - - -
38. cysltr1 ENSDARG00000058246, ENSDARG00000116295 25 1 1.000 - - - - - - - - cysteinyl leukotriene receptor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-250]
39. PEG3_16 PEG3_16 0 1 - - - - - - - - 1.000
40. ttll2 ENSDARG00000077853 9 1 - - - - - - - - 1.000 tubulin tyrosine ligase-like family, member 2 [Source:ZFIN;Acc:ZDB-GENE-041014-297]
41. si:dkey-26g8.9 si:dkey-26g8.9 2 1 1.000 - - - - - - - -
42. CU694385.1 CU694385.1 1 1 1.000 - - - - - - - -
43. arl8 ENSDARG00000094709 6 1 1.000 - - - - - - - - ADP-ribosylation factor-like 8 [Source:ZFIN;Acc:ZDB-GENE-030131-5762]
44. slc6a6b ENSDARG00000098438 7 1 1.000 - - - - - - - - solute carrier family 6 (neurotransmitter transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030131-3077]
45. mei4 ENSDARG00000043912 10 1 1.000 - - - - - - - - meiosis-specific, MEI4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040724-211]
46. zgc:162971 ENSDARG00000101093 1 1 - - - - - - - - 1.000 zgc:162971 [Source:ZFIN;Acc:ZDB-GENE-070424-48]
47. ubxn10 ENSDARG00000052535 24 1 1.000 - - - - - - - - UBX domain protein 10 [Source:ZFIN;Acc:ZDB-GENE-060825-319]
48. AL935184.1 ENSDARG00000070039 1 1 1.000 - - - - - - - -
49. zgc:171731 ENSDARG00000014657, ENSDARG00000112592 5 1 - - - - - - - - 1.000 zgc:171731 [Source:ZFIN;Acc:ZDB-GENE-071004-27]
50. FAM150A 14 1 1.000 - - - - - - - - family with sequence similarity 150 member A, transcript variant X2
51. si:dkey-217m5.3 si:dkey-217m5.3 22 1 1.000 - - - - - - - -
52. CREM_1 CREM_1 9 1 1.000 - - - - - - - -
53. BX649431.1 ENSDARG00000098522 13 1 - - - - 1.000 - - - -
54. zgc:112966_1 ENSDARG00000095369, ENSDARG00000099057, ENSDARG00000101612 16 1 1.000 - - - - - - - - zgc:112966 [Source:ZFIN;Acc:ZDB-GENE-050320-137]
55. GLB1L2 ENSDARG00000034941 74 1 1.000 - - - - - - - - galactosidase beta 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25129]
56. si:ch211-234c11.3_1 ENSDARG00000093615 10 1 1.000 - - - - - - - - si:ch211-234c11.3 [Source:ZFIN;Acc:ZDB-GENE-110914-93]
57. si:dkey-157e10.5 si:dkey-157e10.5 1 1 1.000 - - - - - - - -
58. SNORA62_2 SNORA62_2 4 1 - - - - - - - - 1.000
59. si:dkey-285e18.6 ENSDARG00000098144 1 1 - - - - - - - - 1.000 si:dkey-285e18.6 [Source:ZFIN;Acc:ZDB-GENE-120709-86]
60. zmat4a ENSDARG00000092987, ENSDARG00000111611 1 1 - - - - 1.000 - - - - zinc finger, matrin-type 4a [Source:ZFIN;Acc:ZDB-GENE-081104-333]
61. zgc:153157 ENSDARG00000070423, ENSDARG00000115488 79 1 1.000 - - - - - - - - zgc:153157 [Source:ZFIN;Acc:ZDB-GENE-060825-224]
62. fam163b ENSDARG00000073914 46 1 1.000 - - - - - - - - family with sequence similarity 163, member B [Source:ZFIN;Acc:ZDB-GENE-091204-96]
63. si:dkey-37o8.1 ENSDARG00000071727 64 1 - - - - - - - - 1.000 si:dkey-37o8.1 [Source:ZFIN;Acc:ZDB-GENE-030131-5667]
64. zgc:113274 ENSDARG00000059235, ENSDARG00000116981 19 1 1.000 - - - - - - - - zgc:113274 [Source:ZFIN;Acc:ZDB-GENE-050508-2]
65. unc13ba ENSDARG00000017391 1 1 - - - - - - - - 1.000 unc-13 homolog Ba (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-100921-10]
66. cdc73 ENSDARG00000020201 22 1 1.000 - - - - - - - - cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1309]
67. FP565458.1 FP565458.1 61 1 1.000 - - - - - - - -
68. anks1aa ENSDARG00000062396 1 1 1.000 - - - - - - - - ankyrin repeat and sterile alpha motif domain containing 1Aa [Source:ZFIN;Acc:ZDB-GENE-090312-152]
69. scn4bb ENSDARG00000060319, ENSDARG00000112427 63 1 1.000 - - - - - - - - sodium channel, voltage-gated, type IV, beta b [Source:ZFIN;Acc:ZDB-GENE-031116-71]
70. SLC39A8 ENSDARG00000056757 52 1 1.000 - - - - - - - - solute carrier family 39 (zinc transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-050419-124]
71. or115-1 ENSDARG00000018521 1 1 - - - - - - - - 1.000 odorant receptor, family F, subfamily 115, member 1 [Source:ZFIN;Acc:ZDB-GENE-010309-2]
72. TGFBR2 TGFBR2 2 1 - - - - 1.000 - - - -
73. si:dkey-177p2.15p si:dkey-177p2.15p 20 1 1.000 - - - - - - - -
74. BX119910.6 BX119910.6 11 1 1.000 - - - - - - - -
75. si:ch211-13o20.1 si:ch211-13o20.1 30 1 1.000 - - - - - - - -
76. ppid_1 ENSDARG00000038835 4 1 1.000 - - - - - - - - peptidylprolyl isomerase D [Source:ZFIN;Acc:ZDB-GENE-040625-34]
77. CCDC18 ENSDARG00000078822 5 1 1.000 - - - - - - - - coiled-coil domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-030131-5414]
78. si:ch211-286l10.2 si:ch211-286l10.2 1 1 - - - - - - - - 1.000
79. erc1a ENSDARG00000009941, ENSDARG00000110965 7 1 1.000 - - - - - - - - ELKS/RAB6-interacting/CAST family member 1a [Source:ZFIN;Acc:ZDB-GENE-091214-5]
80. si:dkey-199m13.6 si:dkey-199m13.6 53 1 1.000 - - - - - - - -
81. myo5ab ENSDARG00000025218 14 1 1.000 - - - - - - - - myosin VAb [Source:ZFIN;Acc:ZDB-GENE-050411-72]
82. RASSF7 RASSF7 0 1 - - - - - - - - 1.000
83. CABZ01060813.1 CABZ01060813.1 12 1 - - - - - - - - 1.000
84. si:ch211-239m17.2 si:ch211-239m17.2 1 1 - - - - - - - - 1.000
85. si:dkeyp-82d1.2 si:dkeyp-82d1.2 11 1 1.000 - - - - - - - -
86. ETS1 ENSDARG00000024431 6 1 1.000 - - - - - - - - v-ets avian erythroblastosis virus E26 oncogene homolog 1 [Source:ZFIN;Acc:ZDB-GENE-021115-5]
87. v2rl1 ENSDARG00000005942 1 1 - - - - - - - - 1.000 vomeronasal 2 receptor, l1 [Source:ZFIN;Acc:ZDB-GENE-050419-65]
88. or110-2 ENSDARG00000091172 1 1 - - - - - - - - 1.000 odorant receptor, family D, subfamily 110, member 2 [Source:ZFIN;Acc:ZDB-GENE-070806-76]
89. Metazoa_SRP_23 Metazoa_SRP_23 3 1 1.000 - - - - - - - -
90. PCMTD2 ENSDARG00000053820, ENSDARG00000113456 25 1 1.000 - - - - - - - - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060312-14]
91. CABZ01079304.1 CABZ01079304.1 7 1 1.000 - - - - - - - -
92. PLEKHS1_2 PLEKHS1_2 21 1 - - - - 1.000 - - - -
93. crygm5 ENSDARG00000041179, ENSDARG00000112467 1 1 - - - - - - - - 1.000 crystallin, gamma M5 [Source:ZFIN;Acc:ZDB-GENE-041024-6]
94. AL935186.2 ENSDARG00000097345 6 1 1.000 - - - - - - - -
95. FAM177A1 ENSDARG00000079636 19 1 1.000 - - - - - - - - family with sequence similarity 177, member A1 [Source:ZFIN;Acc:ZDB-GENE-070928-21]
96. F2RL3 ENSDARG00000079399 29 1 1.000 - - - - - - - - F2R like thrombin or trypsin receptor 3 [Source:HGNC Symbol;Acc:HGNC:3540]
97. sod3b ENSDARG00000079183 39 1 1.000 - - - - - - - - superoxide dismutase 3, extracellular b [Source:ZFIN;Acc:ZDB-GENE-030131-8743]
98. elfn2 elfn2 1 1 - - - - - - - - 1.000
99. bmpr2b ENSDARG00000020057 8 1 1.000 - - - - - - - - bone morphogenetic protein receptor, type II b (serine/threonine kinase) [Source:ZFIN;Acc:ZDB-GENE-070618-2]
100. cmlc1 ENSDARG00000032976 455 1 1.000 - - - - - - - - cardiac myosin light chain-1 [Source:ZFIN;Acc:ZDB-GENE-030522-1]

There are 418 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA