Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-17e6.2

Gene Name Gene ID Reads Annotation
si:dkey-17e6.2 si:dkey-17e6.2 72










Genes with expression patterns similar to si:dkey-17e6.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-17e6.2 si:dkey-17e6.2 72 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. gpr22 gpr22 115 3.423 0.766 - - 0.963 0.729 - 0.965 - -
3. CABZ01080599.2 CABZ01080599.2 192 2.755 - - - - - 0.829 0.954 0.972 -
4. adcyap1a ENSDARG00000004015 67 2.688 0.939 - - - - - 0.757 0.992 - adenylate cyclase activating polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-020809-4]
5. tmie ENSDARG00000069423 305 2.599 - - - - - 0.710 0.951 0.938 - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
6. GADD45G GADD45G 382 2.571 0.813 - - - - 0.809 0.949 - -
7. CABZ01084273.1 CABZ01084273.1 16 2.544 1.000 - 0.787 - - - 0.757 - -
8. CR407704.1 CR407704.1 188 2.529 0.719 - - 0.851 - - 0.959 - -
9. SHANK1 ENSDARG00000060539 102 2.456 0.736 - - - - - 0.732 0.988 - SH3 and multiple ankyrin repeat domains 1 [Source:ZFIN;Acc:ZDB-GENE-130530-691]
10. hnrnpa3 ENSDARG00000059351 453 2.437 - - - 0.886 - 0.742 0.809 - - heterogeneous nuclear ribonucleoprotein A3 [Source:ZFIN;Acc:ZDB-GENE-060224-1]
11. nadl1.2 695 2.432 0.760 - - - - - 0.733 0.939 - neural adhesion molecule L1.2, transcript variant X1
12. SAMD14 145 2.385 - - - 0.759 - 0.776 0.850 - - sterile alpha motif domain containing 14, transcript variant X3
13. heyl ENSDARG00000055798, ENSDARG00000112770 76 2.371 - - - - 0.780 0.718 - 0.873 - hes-related family bHLH transcription factor with YRPW motif-like [Source:ZFIN;Acc:ZDB-GENE-030131-7074]
14. cacna1da ENSDARG00000102773 114 2.323 0.779 - - - - 0.790 0.754 - - calcium channel, voltage-dependent, L type, alpha 1D subunit, a [Source:ZFIN;Acc:ZDB-GENE-030616-135]
15. tmcc2 ENSDARG00000046007 148 2.215 0.789 - - - - 0.700 0.726 - - transmembrane and coiled-coil domain family 2 [Source:ZFIN;Acc:ZDB-GENE-091202-2]
16. adcyap1b ENSDARG00000027740 1539 2.207 0.707 - 0.705 - - - 0.795 - - adenylate cyclase activating polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-041010-89]
17. BX470131.1 BX470131.1 86 1.977 1.000 - - - - - 0.977 - -
18. si:ch211-216b21.2 ENSDARG00000060253 54 1.975 1.000 - - - - - 0.975 - - si:ch211-216b21.2 [Source:ZFIN;Acc:ZDB-GENE-130603-96]
19. CABZ01065506.1 CABZ01065506.1 204 1.952 1.000 - - - - - 0.952 - -
20. elovl4a ENSDARG00000006773 412 1.941 1.000 - - - - - 0.941 - - ELOVL fatty acid elongase 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1767]
21. C8H9orf172 C8H9orf172 113 1.918 1.000 - - - - - 0.918 - -
22. CR790363.1 ENSDARG00000097364 145 1.915 - - - 0.952 - - - 0.963 -
23. rtn4r ENSDARG00000090035 46 1.913 1.000 - - - - - 0.913 - - reticulon 4 receptor [Source:ZFIN;Acc:ZDB-GENE-040310-1]
24. si:dkey-169l5.3 si:dkey-169l5.3 239 1.913 - - - - - - 0.950 0.963 -
25. FUT9 FUT9 91 1.91 1.000 - - - - - 0.910 - -
26. cbln1 ENSDARG00000057296 165 1.906 0.984 - - - - - 0.922 - - cerebellin 1 precursor [Source:ZFIN;Acc:ZDB-GENE-040718-226]
27. C21H5orf24 C21H5orf24 333 1.89 0.960 - - - - - 0.930 - -
28. STMN3 ENSDARG00000038465 1009 1.88 - - - - - - 0.987 0.893 - stathmin-like 3 [Source:ZFIN;Acc:ZDB-GENE-081124-2]
29. ncam1b ENSDARG00000007220 233 1.875 - - - 0.942 - - 0.933 - - neural cell adhesion molecule 1b [Source:ZFIN;Acc:ZDB-GENE-010822-2]
30. CR524483.1 ENSDARG00000109248 86 1.871 1.000 - - - - - 0.871 - - si:dkey-151p21.7 [Source:NCBI gene;Acc:562936]
31. PPFIA3 ENSDARG00000077053 310 1.869 0.879 - - - - - 0.990 - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]
32. ndrg4 ENSDARG00000103937 1234 1.86 0.943 - - - - - 0.917 - - NDRG family member 4 [Source:ZFIN;Acc:ZDB-GENE-060512-226]
33. aatkb ENSDARG00000104442 392 1.853 - - - - - - 0.868 0.985 - apoptosis-associated tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-100812-6]
34. TRIM46 TRIM46 73 1.852 - - - - - 0.939 0.913 - -
35. mir219-2 129 1.845 - - - - - 0.891 0.954 - - microRNA 219-2
36. si:dkey-274m14.3 si:dkey-274m14.3 7 1.84 1.000 - - - 0.840 - - - -
37. cacng3b ENSDARG00000076401 91 1.833 0.904 - - - - - 0.929 - - calcium channel, voltage-dependent, gamma subunit 3b [Source:ZFIN;Acc:ZDB-GENE-090828-1]
38. lgi2b ENSDARG00000069701, ENSDARG00000116343 66 1.825 0.939 - - - - - 0.886 - - leucine-rich repeat LGI family, member 2b [Source:ZFIN;Acc:ZDB-GENE-060217-3]
39. trim36 ENSDARG00000062794 785 1.822 - - - 0.863 - - 0.959 - - tripartite motif containing 36 [Source:ZFIN;Acc:ZDB-GENE-040426-2936]
40. si:dkey-157e10.7 si:dkey-157e10.7 105 1.819 - - - 0.831 - - - 0.988 -
41. tlx3b ENSDARG00000017615, ENSDARG00000114069 84 1.818 0.972 - - - - 0.846 - - - T cell leukemia homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-021021-1]
42. ATP6AP1L ATP6AP1L 164 1.796 0.848 - - - - - 0.948 - -
43. phactr3a ENSDARG00000058243 150 1.794 - - - 0.819 - - 0.975 - - phosphatase and actin regulator 3a [Source:ZFIN;Acc:ZDB-GENE-080220-4]
44. cdh7 582 1.79 - - - - - 0.819 0.971 - - cadherin 7, type 2, transcript variant X1
45. gabrg2 ENSDARG00000053665 434 1.788 0.840 - - - - - 0.948 - - gamma-aminobutyric acid (GABA) A receptor, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-091118-65]
46. im:7162084 im:7162084 665 1.786 - - - - - 0.821 0.965 - -
47. SKOR2 SKOR2 1041 1.784 0.850 - - - - - 0.934 - -
48. rhbdl3 ENSDARG00000105190, ENSDARG00000112687, ENSDARG00000116222 977 1.783 - - - - - 0.831 0.952 - - rhomboid, veinlet-like 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050417-2]
49. dclk1a ENSDARG00000018856 177 1.782 - - - - - - 0.804 0.978 - doublecortin-like kinase 1a [Source:ZFIN;Acc:ZDB-GENE-061013-124]
50. lhx5 ENSDARG00000057936 785 1.781 - - 0.798 - - - 0.983 - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
51. scn8ab ENSDARG00000018032, ENSDARG00000112543 883 1.771 - - - - - - 0.928 0.843 - sodium channel, voltage gated, type VIII, alpha subunit b [Source:ZFIN;Acc:ZDB-GENE-060906-2]
52. adora1 adora1 149 1.767 - - - - - 0.793 - 0.974 -
53. PEX5L PEX5L 179 1.764 - - - 0.964 - - 0.800 - -
54. chrna3 ENSDARG00000100991, ENSDARG00000116434 63 1.761 - - - - - - 0.784 0.977 - cholinergic receptor, nicotinic, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-070822-1]
55. gsx1 ENSDARG00000035735 1243 1.761 0.780 - - - - - 0.981 - - GS homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-041008-135]
56. syn2a ENSDARG00000045945 434 1.759 - - - - - - 0.978 0.781 - synapsin IIa [Source:ZFIN;Acc:ZDB-GENE-040718-341]
57. xkr8.1 ENSDARG00000004498 18 1.757 1.000 - - - - - 0.757 - - XK, Kell blood group complex subunit-related family, member 8, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-110106-1]
58. si:dkey-266f7.10 ENSDARG00000086613 7 1.757 1.000 - - - - - 0.757 - - si:dkey-266f7.10 [Source:ZFIN;Acc:ZDB-GENE-120215-242]
59. spock2 ENSDARG00000075393 791 1.757 0.835 - - - - - 0.922 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-090312-170]
60. plcxd3 ENSDARG00000054794 112 1.754 - - - - - 0.841 0.913 - - phosphatidylinositol-specific phospholipase C, X domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050327-10]
61. ly75 ENSDARG00000053113 196 1.754 - - - 0.768 - - - 0.986 - lymphocyte antigen 75 [Source:ZFIN;Acc:ZDB-GENE-050309-166]
62. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 1.753 - - - - - 0.804 0.949 - - immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
63. sez6l2 ENSDARG00000076052 360 1.742 0.763 - - - - - 0.979 - - seizure related 6 homolog (mouse)-like 2 [Source:ZFIN;Acc:ZDB-GENE-091204-189]
64. grin1a ENSDARG00000027828 1327 1.741 - - - - - - 0.941 0.800 - glutamate receptor, ionotropic, N-methyl D-aspartate 1a [Source:ZFIN;Acc:ZDB-GENE-051202-1]
65. mei4 ENSDARG00000043912 10 1.739 - - - 0.982 - - 0.757 - - meiosis-specific, MEI4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040724-211]
66. si:ch211-11c15.3 si:ch211-11c15.3 1279 1.735 0.821 - - - - - 0.914 - -
67. cdk5r1b ENSDARG00000045087 2075 1.734 0.791 - - - - - 0.943 - - cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]
68. si:ch211-138k19.2 si:ch211-138k19.2 398 1.732 0.735 - - - - - 0.997 - -
69. nrxn2b ENSDARG00000063150 343 1.731 0.740 - - - - - - 0.991 - neurexin 2b [Source:ZFIN;Acc:ZDB-GENE-070206-7]
70. git2a ENSDARG00000061915 884 1.73 - - - - - - 0.785 0.945 - G protein-coupled receptor kinase interacting ArfGAP 2a [Source:ZFIN;Acc:ZDB-GENE-060526-267]
71. atpv0e2 ENSDARG00000059057 585 1.73 0.841 - - - - - 0.889 - - ATPase H+ transporting V0 subunit e2 [Source:ZFIN;Acc:ZDB-GENE-050522-135]
72. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 1.73 0.754 - - - - - 0.976 - - contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
73. slc1a2b ENSDARG00000102453 3136 1.725 0.780 - - - - - 0.945 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
74. atp2b3b ENSDARG00000023445 1424 1.724 0.787 - - - - - 0.937 - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
75. pou4f2 ENSDARG00000069737 451 1.724 0.951 - - - - - 0.773 - - POU class 4 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-040401-1]
76. pcloa ENSDARG00000063299 353 1.721 0.904 - - - - - 0.817 - - piccolo presynaptic cytomatrix protein a [Source:ZFIN;Acc:ZDB-GENE-030131-8115]
77. CRIP2 ENSDARG00000070670 323 1.72 0.955 - - - - - 0.765 - - cysteine-rich protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2889]
78. nptx1l ENSDARG00000074671 569 1.718 0.791 - - - - - 0.927 - - neuronal pentraxin 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2418]
79. neurog1 ENSDARG00000056130 3924 1.717 - - - - - 0.736 0.981 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
80. si:dkey-193c22.1 ENSDARG00000093687 104 1.715 0.958 - - - - - 0.757 - - si:dkey-193c22.1 [Source:ZFIN;Acc:ZDB-GENE-030131-7957]
81. mapk12b ENSDARG00000006409 2246 1.711 - - - - - - 0.978 0.733 - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
82. FRMPD3 ENSDARG00000074865, ENSDARG00000109705 276 1.711 0.730 - - - - - 0.981 - - FERM and PDZ domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100316-9]
83. upf3a ENSDARG00000069297, ENSDARG00000111067 196 1.71 0.752 - - - - - 0.958 - - UPF3A, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-060721-2]
84. diras1a ENSDARG00000028066 126 1.71 0.853 - - - - - 0.857 - - DIRAS family, GTP-binding RAS-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5788]
85. zgc:113210 ENSDARG00000002872 99 1.707 1.000 - - - - - 0.707 - - zgc:113210 [Source:ZFIN;Acc:ZDB-GENE-050320-83]
86. si:ch73-389b16.2 ENSDARG00000103802 340 1.705 - - - - - 0.884 0.821 - - si:ch73-389b16.2 [Source:ZFIN;Acc:ZDB-GENE-050411-113]
87. SV2A ENSDARG00000059945 1278 1.704 0.838 - - - - - 0.866 - - synaptic vesicle glycoprotein 2A [Source:ZFIN;Acc:ZDB-GENE-131001-1]
88. chodl ENSDARG00000034528, ENSDARG00000109583, ENSDARG00000111154 1306 1.703 - - - - - 0.883 0.820 - - chondrolectin [Source:ZFIN;Acc:ZDB-GENE-050417-36]
89. dachd ENSDARG00000069440 271 1.702 - - - - - - 0.758 0.944 - dachshund d [Source:ZFIN;Acc:ZDB-GENE-070427-2]
90. GABRG1 ENSDARG00000101995 201 1.701 0.722 - - - - - 0.979 - - gamma-aminobutyric acid type A receptor gamma1 subunit [Source:ZFIN;Acc:ZDB-GENE-141215-66]
91. rac3a ENSDARG00000090062 394 1.7 0.728 - - - - - 0.972 - - Rac family small GTPase 3a [Source:ZFIN;Acc:ZDB-GENE-040718-256]
92. eno2 ENSDARG00000014287 2162 1.7 0.746 - - - - - 0.954 - - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
93. add2 ENSDARG00000074581 1402 1.699 0.800 - - - - - 0.899 - - adducin 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-080718-4]
94. AGO1 ENSDARG00000092644 4521 1.699 - - - - - 0.766 0.933 - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
95. SMARCA4 ENSDARG00000104339 48 1.699 - - - 0.942 - - 0.757 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:HGNC Symbol;Acc:HGNC:11100]
96. SLC35D3 ENSDARG00000107442 12 1.699 - - 0.729 - - - 0.970 - - solute carrier family 35 member D3 [Source:HGNC Symbol;Acc:HGNC:15621]
97. sox14 ENSDARG00000070929 352 1.698 - - - 0.783 - - 0.915 - - SRY (sex determining region Y)-box 14 [Source:ZFIN;Acc:ZDB-GENE-051113-268]
98. sox19b ENSDARG00000040266 532 1.698 - - - - - 0.759 0.939 - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
99. tac3a ENSDARG00000093089, ENSDARG00000110723 75 1.697 - - - - - 0.810 0.887 - - tachykinin 3a [Source:ZFIN;Acc:ZDB-GENE-090313-253]
100. calb1 ENSDARG00000031598 252 1.697 0.852 - - - - - 0.845 - - calbindin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8107]

There are 2145 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA