Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-176f19.5

Gene Name Gene ID Reads Annotation
si:dkey-176f19.5 si:dkey-176f19.5 10










Genes with expression patterns similar to si:dkey-176f19.5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-176f19.5 si:dkey-176f19.5 10 4 1.000 - 1.000 1.000 - - - - 1.000
2. l3mbtl3 ENSDARG00000025983 12 2 1.000 - - - - - - - 1.000 l(3)mbt-like 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040724-127]
3. ttc12 ENSDARG00000056896 97 1.982 1.000 - 0.982 - - - - - - tetratricopeptide repeat domain 12 [Source:ZFIN;Acc:ZDB-GENE-071016-4]
4. cdk20 ENSDARG00000003867 27 1.95 1.000 - - 0.950 - - - - - cyclin-dependent kinase 20 [Source:ZFIN;Acc:ZDB-GENE-041212-84]
5. fbxo16 ENSDARG00000033949 35 1.869 1.000 - 0.869 - - - - - - F-box protein 16 [Source:ZFIN;Acc:ZDB-GENE-041015-747]
6. e2f5 ENSDARG00000038812 388 1.826 1.000 - 0.826 - - - - - - E2F transcription factor 5 [Source:ZFIN;Acc:ZDB-GENE-030828-3]
7. si:ch211-131e11.14 si:ch211-131e11.14 7 1.825 0.825 - - - - - - - 1.000
8. mmp23bb ENSDARG00000009825 133 1.79 1.000 - 0.790 - - - - - - matrix metallopeptidase 23bb [Source:ZFIN;Acc:ZDB-GENE-050417-448]
9. zgc:158654 19 1.789 1.000 - - 0.789 - - - - - zgc:158654, transcript variant X1
10. hcrt ENSDARG00000070932 4 1.789 1.000 - - 0.789 - - - - - hypocretin (orexin) neuropeptide precursor [Source:ZFIN;Acc:ZDB-GENE-040324-1]
11. BX465203.1 ENSDARG00000113985 8 1.789 1.000 - - 0.789 - - - - -
12. mcm5_1 ENSDARG00000019507 10 1.789 1.000 - - 0.789 - - - - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
13. pih1d3 ENSDARG00000038612, ENSDARG00000116391, ENSDARG00000116607 57 1.724 0.860 - 0.864 - - - - - - PIH1 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040722-2]
14. si:ch73-119o17.1 si:ch73-119o17.1 6 1.712 - - - 0.712 - - - - 1.000
15. mvd mvd 105 1.639 0.860 - 0.779 - - - - - -
16. efcab2 ENSDARG00000074323 88 1.494 0.740 - 0.754 - - - - - - EF-hand calcium binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-070521-5]
17. taar13d ENSDARG00000110650 0 1 - - - - - - - - 1.000 trace amine associated receptor 13d [Source:ZFIN;Acc:ZDB-GENE-041014-62]
18. fam101a 4 1 - - - - - - - - 1.000 family with sequence similarity 101, member A
19. BX511182.1 BX511182.1 8 1 - - - - - - - - 1.000
20. zbtb32 ENSDARG00000073726 1 1 - - - - - - - - 1.000 zinc finger and BTB domain containing 32 [Source:ZFIN;Acc:ZDB-GENE-131121-166]
21. zgc:92658 8 1 - - - - - - - - 1.000 zgc:92658
22. C6H22orf23 C6H22orf23 15 1 - - - - - - - - 1.000
23. si:dkey-88l16.3 ENSDARG00000094055 0 1 - - - - - - - - 1.000 si:dkey-88l16.3 [Source:ZFIN;Acc:ZDB-GENE-030131-6015]
24. si:ch211-222b21.3 si:ch211-222b21.3 2 1 - - - - - - - - 1.000
25. guk1b ENSDARG00000005776 23 1 1.000 - - - - - - - - guanylate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-020916-1]
26. traf1 ENSDARG00000069482 50 1 1.000 - - - - - - - - TNF receptor-associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-071120-4]
27. CABZ01086354.1 CABZ01086354.1 22 1 - - - 1.000 - - - - -
28. gpr75 ENSDARG00000098526 32 1 1.000 - - - - - - - - G protein-coupled receptor 75 [Source:ZFIN;Acc:ZDB-GENE-100316-3]
29. RBM11 ENSDARG00000090202 15 1 1.000 - - - - - - - - RNA binding motif protein 11 [Source:ZFIN;Acc:ZDB-GENE-091204-317]
30. U11 U11 11 1 - - - - - - - - 1.000
31. si:ch211-232m19.4 19 1 1.000 - - - - - - - - si:ch211-232m19.4
32. tdrd6 ENSDARG00000070052 1 1 - - - - - - - - 1.000 tudor domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-041001-210]
33. MDFI ENSDARG00000089564 8 1 1.000 - - - - - - - - MyoD family inhibitor [Source:HGNC Symbol;Acc:HGNC:6967]
34. si:dkey-222b8.4 ENSDARG00000057227 13 1 1.000 - - - - - - - - si:dkey-222b8.4 [Source:ZFIN;Acc:ZDB-GENE-060503-438]
35. si:dkey-161j23.5 ENSDARG00000094441 11 1 1.000 - - - - - - - - si:dkey-161j23.5 [Source:ZFIN;Acc:ZDB-GENE-091204-373]
36. CABZ01054394.3 CABZ01054394.3 60 1 1.000 - - - - - - - -
37. dnajb1b ENSDARG00000041394 25 1 - - - - - - - - 1.000 DnaJ (Hsp40) homolog, subfamily B, member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5455]
38. si:dkey-47k16.3 si:dkey-47k16.3 17 1 - - - - - - - - 1.000
39. si:ch211-188i4.4 5 1 1.000 - - - - - - - - si:ch211-188i4.4, transcript variant X3
40. ARMC6 ENSDARG00000103770 39 1 1.000 - - - - - - - - armadillo repeat containing 6 [Source:HGNC Symbol;Acc:HGNC:25049]
41. plp1b ENSDARG00000011929 8 1 - - - - - - - - 1.000 proteolipid protein 1b [Source:ZFIN;Acc:ZDB-GENE-030710-6]
42. si:ch211-196c10.13 ENSDARG00000096756 28 1 - - - - - - - - 1.000 si:ch211-196c10.13 [Source:ZFIN;Acc:ZDB-GENE-130603-71]
43. si:dkey-222o15.3 si:dkey-222o15.3 3 1 - - - - - - - - 1.000
44. 5S_rRNA_27 5S_rRNA_27 2 1 - - - - - - - - 1.000
45. SNORA53 SNORA53 10 1 - - - - - - - - 1.000
46. si:dkey-209n16.2 ENSDARG00000095914 27 1 1.000 - - - - - - - - si:dkey-209n16.2 [Source:ZFIN;Acc:ZDB-GENE-110408-44]
47. ABCD2 ENSDARG00000059409 1 1 - - - - - - - - 1.000 ATP-binding cassette, sub-family D (ALD), member 2 [Source:ZFIN;Acc:ZDB-GENE-050517-28]
48. CABZ01061549.1 CABZ01061549.1 17 1 1.000 - - - - - - - -
49. luzp2 ENSDARG00000068247 80 1 1.000 - - - - - - - - leucine zipper protein 2 [Source:ZFIN;Acc:ZDB-GENE-060503-278]
50. BX927234.2 ENSDARG00000115246 3 1 1.000 - - - - - - - -
51. htr3b ENSDARG00000061749 49 1 1.000 - - - - - - - - 5-hydroxytryptamine (serotonin) receptor 3B [Source:ZFIN;Acc:ZDB-GENE-071012-4]
52. LPHN2_1 LPHN2_1 3 1 - - - - - - - - 1.000
53. ENSDARG00000088328 ENSDARG00000088328 2 1 - - - - - - - - 1.000
54. htr2a htr2a 1 1 - - - - - - - - 1.000
55. tas1r3 ENSDARG00000006341 3 1 1.000 - - - - - - - - taste receptor, type 1, member 3 [Source:ZFIN;Acc:ZDB-GENE-070917-3]
56. RBBP6_3 RBBP6_3 34 1 1.000 - - - - - - - -
57. GPRIN1 10 1 - - - 1.000 - - - - - G protein regulated inducer of neurite outgrowth 1
58. si:dkey-81i14.3 si:dkey-81i14.3 1 1 - - - - - - - - 1.000
59. arhgef3 ENSDARG00000013834 3 1 1.000 - - - - - - - - Rho guanine nucleotide exchange factor (GEF) 3 [Source:ZFIN;Acc:ZDB-GENE-050208-773]
60. si:ch211-169j7.3 si:ch211-169j7.3 4 1 - - - - - - - - 1.000
61. si:ch211-113a14.10 si:ch211-113a14.10 2 1 - - - - - - - - 1.000
62. si:dkey-208k22.1 si:dkey-208k22.1 1 1 - - - - - - - - 1.000
63. BX927122.1 ENSDARG00000100571 0 1 - - - - - - - - 1.000
64. zp2.3 ENSDARG00000090237 45 1 - - - - - - - - 1.000 zona pellucida glycoprotein 2, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-010622-2]
65. BX469915.2 BX469915.2 48 1 1.000 - - - - - - - -
66. uckl1a ENSDARG00000001686 21 1 1.000 - - - - - - - - uridine-cytidine kinase 1-like 1a [Source:ZFIN;Acc:ZDB-GENE-040724-238]
67. esr2b ENSDARG00000034181 20 1 1.000 - - - - - - - - estrogen receptor 2b [Source:ZFIN;Acc:ZDB-GENE-030116-1]
68. si:ch211-150o20.5 si:ch211-150o20.5 1 1 1.000 - - - - - - - -
69. SLC47A1_2 SLC47A1_2 50 1 1.000 - - - - - - - -
70. BX511061.2 BX511061.2 30 1 1.000 - - - - - - - -
71. si:dkeyp-82h4.1 ENSDARG00000096463 18 1 1.000 - - - - - - - - si:dkeyp-82h4.1 [Source:ZFIN;Acc:ZDB-GENE-120709-49]
72. UBE2O 1 1 - - - - - - - - 1.000 ubiquitin-conjugating enzyme E2O
73. BX324003.4 BX324003.4 24 1 - - - - - - - - 1.000
74. bco2b ENSDARG00000041715 13 1 1.000 - - - - - - - - beta-carotene oxygenase 2b [Source:ZFIN;Acc:ZDB-GENE-060421-7448]
75. mink1 ENSDARG00000035360, ENSDARG00000112785 13 1 1.000 - - - - - - - - misshapen-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-060526-45]
76. gdf9 ENSDARG00000003229 4 1 1.000 - - - - - - - - growth differentiation factor 9 [Source:ZFIN;Acc:ZDB-GENE-050221-7]
77. KSR1_1 KSR1_1 1 1 - - - - - - - - 1.000
78. pyyb ENSDARG00000035832 18 1 1.000 - - - - - - - - peptide YYb [Source:ZFIN;Acc:ZDB-GENE-060215-2]
79. BX323444.2 ENSDARG00000117710 13 1 1.000 - - - - - - - -
80. zgc:173603 zgc:173603 2 1 - - - - - - - - 1.000
81. VWDE ENSDARG00000103443 10 1 - - - - - - - - 1.000 von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
82. si:dkey-211i20.3 si:dkey-211i20.3 1 1 - - - - - - - - 1.000
83. trhra ENSDARG00000076546 3 1 1.000 - - - - - - - - thyrotropin-releasing hormone receptor a [Source:ZFIN;Acc:ZDB-GENE-100922-18]
84. il15l ENSDARG00000007743, ENSDARG00000109605 17 1 1.000 - - - - - - - - interleukin 15, like [Source:ZFIN;Acc:ZDB-GENE-041111-173]
85. zgc:113691 ENSDARG00000038898 36 1 1.000 - - - - - - - - zgc:113691 [Source:ZFIN;Acc:ZDB-GENE-050220-7]
86. gh1 ENSDARG00000038185 1 1 - - - - - - - - 1.000 growth hormone 1 [Source:ZFIN;Acc:ZDB-GENE-030725-2]
87. si:dkey-11n6.3 si:dkey-11n6.3 1 1 - - - - - - - - 1.000
88. pou1f1 ENSDARG00000058924, ENSDARG00000110816, ENSDARG00000115109 17 1 - - - - - - - - 1.000 POU class 1 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040630-7]
89. or115-8 ENSDARG00000092406 1 1 - - - - - - - - 1.000 odorant receptor, family F, subfamily 115, member 8 [Source:ZFIN;Acc:ZDB-GENE-070806-10]
90. CR848032.2 CR848032.2 0 1 - - - - - - - - 1.000
91. rdh14a ENSDARG00000039299 79 1 1.000 - - - - - - - - retinol dehydrogenase 14a [Source:ZFIN;Acc:ZDB-GENE-041010-124]
92. si:ch211-255f4.4 si:ch211-255f4.4 0 1 - - - - - - - - 1.000
93. si:dkey-233h12.3 si:dkey-233h12.3 4 1 - - - - - - - - 1.000
94. lars2 ENSDARG00000075337 31 1 1.000 - - - - - - - - leucyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-070928-3]
95. si:ch211-89f22.1 si:ch211-89f22.1 11 1 - - - - - - - - 1.000
96. NUGGC NUGGC 9 1 - - - - - - - - 1.000
97. si:dkey-47k16.1 si:dkey-47k16.1 5 1 - - - - - - - - 1.000
98. CLTCL1_2 CLTCL1_2 1 1 - - - - - - - - 1.000
99. SIGLEC15 SIGLEC15 10 1 - - - - - - - - 1.000
100. si:dkey-241l7.2 ENSDARG00000105335 6 1 - - - - - - - - 1.000 si:dkey-241l7.2 [Source:ZFIN;Acc:ZDB-GENE-041014-240]

There are 542 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA