Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-188i4.4

Gene Name Gene ID Reads Annotation
si:ch211-188i4.4 5 si:ch211-188i4.4, transcript variant X3










Genes with expression patterns similar to si:ch211-188i4.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-188i4.4 5 6 1.000 1.000 - 1.000 1.000 - - 1.000 1.000 si:ch211-188i4.4, transcript variant X3
2. mcm5_1 ENSDARG00000019507 10 2 1.000 1.000 - - - - - - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
3. si:dkeyp-66a7.1 si:dkeyp-66a7.1 6 2 1.000 1.000 - - - - - - -
4. si:ch211-120c15.1 si:ch211-120c15.1 20 2 1.000 1.000 - - - - - - -
5. zgc:112234_5 ENSDARG00000099514, ENSDARG00000102806, ENSDARG00000104588, ENSDARG00000105340, ENSDARG00000105393, ENSDARG00000105414, ENSDARG00000105468, ENSDARG00000105483, ENSDARG00000105507, ENSDARG00000111934 6 2 - 1.000 - - 1.000 - - - - zgc:112234 [Source:NCBI gene;Acc:554097]
6. CABZ01049058.1 CABZ01049058.1 7 2 - - - 1.000 - - - 1.000 -
7. CR792453.1 ENSDARG00000095699 4 2 - 1.000 - - - - - 1.000 -
8. gna15.3 ENSDARG00000056654, ENSDARG00000092948 9 2 - 1.000 - - - - - 1.000 - guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-050208-700]
9. traf1 ENSDARG00000069482 50 2 1.000 1.000 - - - - - - - TNF receptor-associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-071120-4]
10. bmp1b ENSDARG00000028053 25 2 1.000 1.000 - - - - - - - bone morphogenetic protein 1b [Source:ZFIN;Acc:ZDB-GENE-060818-2]
11. si:dkeyp-82h4.1 ENSDARG00000096463 18 2 1.000 1.000 - - - - - - - si:dkeyp-82h4.1 [Source:ZFIN;Acc:ZDB-GENE-120709-49]
12. lhfpl5a ENSDARG00000045023 2 1.98 - - - - - - - 1.000 0.980 LHFPL tetraspan subfamily member 5a [Source:ZFIN;Acc:ZDB-GENE-110131-8]
13. si:dkey-211i20.3 si:dkey-211i20.3 1 1.941 - - - 0.941 - - - 1.000 -
14. BX469915.2 BX469915.2 48 1.906 1.000 - - - 0.906 - - - -
15. RPGRIP1 ENSDARG00000076055 10 1.887 - 1.000 - - - - - - 0.887 RPGR interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-091204-394]
16. cmpk2 ENSDARG00000031359 1 1.844 - - - - 0.844 - - 1.000 - cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040724-24]
17. FAM175B FAM175B 23 1.844 1.000 - - - 0.844 - - - -
18. soga3a ENSDARG00000063311, ENSDARG00000088571, ENSDARG00000097245 11 1.844 - - - - 0.844 - - 1.000 - SOGA family member 3a [Source:ZFIN;Acc:ZDB-GENE-100921-84]
19. ODF2 ODF2 6 1.844 - 1.000 - - 0.844 - - - -
20. MOB2 MOB2 4 1.844 - 1.000 - - 0.844 - - - -
21. MFAP4_3 MFAP4_3 7 1.844 - 1.000 - - 0.844 - - - -
22. e2f5 ENSDARG00000038812 388 1.829 1.000 - - - - - - - 0.829 E2F transcription factor 5 [Source:ZFIN;Acc:ZDB-GENE-030828-3]
23. chrna6 ENSDARG00000055559 60 1.825 0.825 1.000 - - - - - - - cholinergic receptor, nicotinic, alpha 6 [Source:ZFIN;Acc:ZDB-GENE-090312-91]
24. hsp70l_1 ENSDARG00000055723 72 1.825 0.825 1.000 - - - - - - - heat shock cognate 70-kd protein, like [Source:ZFIN;Acc:ZDB-GENE-050321-1]
25. CABZ01021538.1 CABZ01021538.1 67 1.824 0.824 1.000 - - - - - - -
26. slc13a1 ENSDARG00000045638, ENSDARG00000114835 13 1.817 - 1.000 - 0.817 - - - - - solute carrier family 13 member 1 [Source:ZFIN;Acc:ZDB-GENE-031222-3]
27. olig1 ENSDARG00000040948 1 1.817 - - - 0.817 - - - 1.000 - oligodendrocyte transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050107-2]
28. antxr2a ENSDARG00000104118, ENSDARG00000111517 12 1.817 - 1.000 - 0.817 - - - - - ANTXR cell adhesion molecule 2a [Source:ZFIN;Acc:ZDB-GENE-060526-14]
29. PCDH10 PCDH10 7 1.817 - 1.000 - 0.817 - - - - -
30. rnf150a_1 ENSDARG00000024827 12 1.817 1.000 - - 0.817 - - - - - ring finger protein 150a [Source:ZFIN;Acc:ZDB-GENE-060213-1]
31. si:dkey-14o6.7 si:dkey-14o6.7 9 1.817 - 1.000 - 0.817 - - - - -
32. BX927122.3 BX927122.3 19 1.813 - 1.000 - - - - - - 0.813
33. ompb ENSDARG00000032380, ENSDARG00000115093 12 1.797 - - - 0.962 - - - - 0.835 olfactory marker protein b [Source:ZFIN;Acc:ZDB-GENE-030103-1]
34. FP236851.1 FP236851.1 10 1.791 - 1.000 - - 0.791 - - - -
35. ALOX5_2 ALOX5_2 6 1.764 - 1.000 - - 0.764 - - - -
36. si:dkey-241f21.7 si:dkey-241f21.7 3 1.737 - 1.000 - - 0.737 - - - -
37. si:dkey-24p1.7 ENSDARG00000089404 7 1.709 - 1.000 - - 0.709 - - - - si:dkey-24p1.7 [Source:ZFIN;Acc:ZDB-GENE-121214-215]
38. sc:d217 ENSDARG00000079645 32 1.684 0.809 0.875 - - - - - - - sc:d217 [Source:ZFIN;Acc:ZDB-GENE-080303-15]
39. si:dkey-226m8.9 si:dkey-226m8.9 4 1.623 - - - 0.779 0.844 - - - -
40. si:ch73-173m3.3 si:ch73-173m3.3 425 1.623 0.751 0.872 - - - - - - -
41. SP5 SP5 8 1.617 - - - 0.715 - - - 0.902 -
42. agfg1a ENSDARG00000030020 6 1.52 - - - 0.817 - - - - 0.703 ArfGAP with FG repeats 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5808]
43. stm ENSDARG00000035694 1567 1.518 - - - 0.801 - - - 0.717 - starmaker [Source:ZFIN;Acc:ZDB-GENE-031112-4]
44. rereb ENSDARG00000075670 136 1.463 0.705 - - - - - - - 0.758 arginine-glutamic acid dipeptide (RE) repeats b [Source:ZFIN;Acc:ZDB-GENE-070212-3]
45. cryba2b ENSDARG00000041925 4329 1.445 0.719 - - 0.726 - - - - - crystallin, beta A2b [Source:ZFIN;Acc:ZDB-GENE-040718-324]
46. l3mbtl3 ENSDARG00000025983 12 1 1.000 - - - - - - - - l(3)mbt-like 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040724-127]
47. crfb13 crfb13 2 1 1.000 - - - - - - - -
48. SDR16C5 SDR16C5 34 1 - 1.000 - - - - - - -
49. BX649498.2 BX649498.2 40 1 1.000 - - - - - - - -
50. b3galtla b3galtla 111 1 - 1.000 - - - - - - -
51. BX321870.1 ENSDARG00000098519 9 1 - 1.000 - - - - - - -
52. fank1 ENSDARG00000039657 9 1 1.000 - - - - - - - - fibronectin type III and ankyrin repeat domains 1 [Source:ZFIN;Acc:ZDB-GENE-130613-3]
53. CABZ01023601.1 CABZ01023601.1 1 1 - 1.000 - - - - - - -
54. efemp2b ENSDARG00000020811 116 1 1.000 - - - - - - - - EGF containing fibulin extracellular matrix protein 2b [Source:ZFIN;Acc:ZDB-GENE-030219-125]
55. si:ch211-1e14.4 si:ch211-1e14.4 1 1 1.000 - - - - - - - -
56. pik3r5 ENSDARG00000102762 56 1 1.000 - - - - - - - - phosphoinositide-3-kinase, regulatory subunit 5 [Source:ZFIN;Acc:ZDB-GENE-030131-2308]
57. CU457778.1 ENSDARG00000098976 38 1 - 1.000 - - - - - - - uncharacterized LOC100535115 [Source:NCBI gene;Acc:100535115]
58. MCMDC2 0 1 - 1.000 - - - - - - - minichromosome maintenance domain containing 2, transcript variant X2
59. CU633477.1 CU633477.1 19 1 1.000 - - - - - - - -
60. si:dkey-256i11.4 si:dkey-256i11.4 3 1 - - - - - - - 1.000 -
61. BRSK2_2 BRSK2_2 3 1 1.000 - - - - - - - -
62. si:dkey-222f2.3 si:dkey-222f2.3 8 1 - - - - - - - 1.000 -
63. si:ch73-77n15.2 si:ch73-77n15.2 0 1 - - - - - - - 1.000 -
64. CR352328.3 CR352328.3 9 1 - - - - - - - 1.000 -
65. CABZ01073954.1 CABZ01073954.1 258 1 - 1.000 - - - - - - -
66. PTGR2 ENSDARG00000070673 43 1 - 1.000 - - - - - - - prostaglandin reductase 2 [Source:ZFIN;Acc:ZDB-GENE-050506-71]
67. cyp27a7 ENSDARG00000033802 216 1 - 1.000 - - - - - - - cytochrome P450, family 27, subfamily A, polypeptide 7 [Source:ZFIN;Acc:ZDB-GENE-081104-519]
68. sergef ENSDARG00000070986, ENSDARG00000111782 48 1 - 1.000 - - - - - - - secretion regulating guanine nucleotide exchange factor [Source:ZFIN;Acc:ZDB-GENE-061220-11]
69. coch ENSDARG00000024032 7 1 - - - - - - - 1.000 - coagulation factor C homolog, cochlin (Limulus polyphemus) [Source:ZFIN;Acc:ZDB-GENE-030616-403]
70. klhl42 ENSDARG00000006011 46 1 - 1.000 - - - - - - - kelch-like family, member 42 [Source:ZFIN;Acc:ZDB-GENE-041210-190]
71. SNORA31 SNORA31 23 1 - 1.000 - - - - - - -
72. si:dkey-233e3.4 si:dkey-233e3.4 3 1 - 1.000 - - - - - - -
73. tmprss4b ENSDARG00000012860 6 1 - - - - - - - 1.000 - transmembrane serine protease 4b [Source:ZFIN;Acc:ZDB-GENE-030131-5862]
74. trib1 ENSDARG00000110963 1 1 1.000 - - - - - - - - tribbles pseudokinase 1 [Source:ZFIN;Acc:ZDB-GENE-091207-4]
75. MFAP4_7 MFAP4_7 43 1 - 1.000 - - - - - - -
76. SBSPON ENSDARG00000110160 2 1 - - - - - - - 1.000 - somatomedin B and thrombospondin type 1 domain containing [Source:HGNC Symbol;Acc:HGNC:30362]
77. CU459152.1 CU459152.1 407 1 - 1.000 - - - - - - -
78. NFATC4 ENSDARG00000054162 44 1 - 1.000 - - - - - - - nuclear factor of activated T cells 4 [Source:ZFIN;Acc:ZDB-GENE-070912-659]
79. lpar6b ENSDARG00000069441 65 1 1.000 - - - - - - - - lysophosphatidic acid receptor 6b [Source:ZFIN;Acc:ZDB-GENE-110408-67]
80. si:dkey-71b5.6 ENSDARG00000098861 12 1 - 1.000 - - - - - - - si:dkey-71b5.6 [Source:NCBI gene;Acc:100294632]
81. tfr1b ENSDARG00000077372, ENSDARG00000112880 24 1 - 1.000 - - - - - - - transferrin receptor 1b [Source:ZFIN;Acc:ZDB-GENE-041220-2]
82. si:dkey-100n10.2 101 1 - 1.000 - - - - - - - si:dkey-100n10.2
83. RAPGEF4 ENSDARG00000079872 82 1 - 1.000 - - - - - - - Rap guanine nucleotide exchange factor (GEF) 4 [Source:ZFIN;Acc:ZDB-GENE-070912-385]
84. trim62 ENSDARG00000060901 12 1 - - - 1.000 - - - - - tripartite motif containing 62 [Source:ZFIN;Acc:ZDB-GENE-070112-502]
85. rims1a ENSDARG00000074680 143 1 - 1.000 - - - - - - - regulating synaptic membrane exocytosis 1a [Source:ZFIN;Acc:ZDB-GENE-090312-135]
86. vip ENSDARG00000078247 10 1 - 1.000 - - - - - - - vasoactive intestinal peptide [Source:ZFIN;Acc:ZDB-GENE-080204-3]
87. si:ch211-209j12.4 si:ch211-209j12.4 43 1 1.000 - - - - - - - -
88. si:dkey-3n22.9 ENSDARG00000096273 1 1 - 1.000 - - - - - - - si:dkey-3n22.9 [Source:ZFIN;Acc:ZDB-GENE-120215-95]
89. si:dkeyp-59a8.1 si:dkeyp-59a8.1 6 1 - 1.000 - - - - - - -
90. si:ch211-249h16.8 ENSDARG00000093630 1 1 - - - - - - - 1.000 - si:ch211-249h16.8 [Source:ZFIN;Acc:ZDB-GENE-090311-36]
91. cdh18 cdh18 64 1 - 1.000 - - - - - - -
92. eif3bb ENSDARG00000074213 2 1 - - - - - - - 1.000 - eukaryotic translation initiation factor 3, subunit Bb [Source:ZFIN;Acc:ZDB-GENE-090312-175]
93. mtus2 mtus2 22 1 - 1.000 - - - - - - -
94. n6amt2 7 1 - 1.000 - - - - - - - N-6 adenine-specific DNA methyltransferase 2 (putative), transcript variant X1
95. atp2b2 ENSDARG00000044902, ENSDARG00000063433 140 1 - 1.000 - - - - - - - ATPase plasma membrane Ca2+ transporting 2 [Source:ZFIN;Acc:ZDB-GENE-061016-1]
96. BX005294.2 ENSDARG00000109361 3 1 - 1.000 - - - - - - -
97. fem1a ENSDARG00000067966 11 1 - - - - - - - 1.000 - fem-1 homolog a (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-030131-5824]
98. neu3.1 ENSDARG00000096382 9 1 - 1.000 - - - - - - - sialidase 3 (membrane sialidase), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-061201-39]
99. si:ch211-266l9.1 si:ch211-266l9.1 18 1 1.000 - - - - - - - -
100. HYKK_1 HYKK_1 4 1 - 1.000 - - - - - - -

There are 950 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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