Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-16b10.3

Gene Name Gene ID Reads Annotation
si:dkey-16b10.3 si:dkey-16b10.3 21










Genes with expression patterns similar to si:dkey-16b10.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. CRTC1 47 1 - - - 1.000 - - - - - CREB regulated transcription coactivator 1
2. si:dkey-16b10.3 si:dkey-16b10.3 21 1 - - - 1.000 - - - - -
3. zgc:92161 ENSDARG00000101749 27 0.999 - - - 0.999 - - - - - zgc:92161 [Source:ZFIN;Acc:ZDB-GENE-040912-22]
4. adam10b ENSDARG00000015502 26 0.999 - - - 0.999 - - - - - ADAM metallopeptidase domain 10b [Source:ZFIN;Acc:ZDB-GENE-071115-1]
5. CD53 CD53 108 0.998 - - - 0.998 - - - - -
6. gpr186 ENSDARG00000094860 53 0.997 - - - 0.997 - - - - - G protein-coupled receptor 186 [Source:ZFIN;Acc:ZDB-GENE-060503-489]
7. si:ch73-239k17.1 si:ch73-239k17.1 44 0.997 - - - 0.997 - - - - -
8. map3k8 ENSDARG00000061710 76 0.997 - - - 0.997 - - - - - mitogen-activated protein kinase kinase kinase 8 [Source:ZFIN;Acc:ZDB-GENE-100316-8]
9. HELZ2_1 ENSDARG00000012600 53 0.996 - - - 0.996 - - - - - helicase with zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:30021]
10. tmub2 ENSDARG00000056467, ENSDARG00000109925 100 0.995 - - - 0.995 - - - - - transmembrane and ubiquitin-like domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030616-254]
11. CABZ01054965.1 ENSDARG00000090844 74 0.995 - - - 0.995 - - - - - interleukin-1 receptor type 1-like [Source:NCBI gene;Acc:799279]
12. arhgap25 ENSDARG00000061784 112 0.993 - - - 0.993 - - - - - Rho GTPase activating protein 25 [Source:ZFIN;Acc:ZDB-GENE-060526-210]
13. zgc:114046 ENSDARG00000091728 68 0.993 - - - 0.993 - - - - - zgc:114046 [Source:ZFIN;Acc:ZDB-GENE-050320-24]
14. FP103003.1 FP103003.1 167 0.992 - - - 0.992 - - - - -
15. CABZ01021433.1 ENSDARG00000105696 74 0.991 - - - 0.991 - - - - - si:cabz01021433.2 [Source:NCBI gene;Acc:100333857]
16. si:ch211-133l11.10 ENSDARG00000005626 381 0.991 - - - 0.991 - - - - - si:ch211-133l11.10 [Source:ZFIN;Acc:ZDB-GENE-141219-14]
17. ugt2a4 ENSDARG00000051940 85 0.99 - - - 0.990 - - - - - UDP glucuronosyltransferase 2 family, polypeptide A4 [Source:ZFIN;Acc:ZDB-GENE-080721-23]
18. ENSDARG00000092971 ENSDARG00000092971 563 0.99 - - - 0.990 - - - - -
19. ccm2l ENSDARG00000063089 100 0.988 - - - 0.988 - - - - - CCM2 like scaffold protein [Source:ZFIN;Acc:ZDB-GENE-090313-248]
20. si:ch211-81a5.8 ENSDARG00000070972 59 0.988 - - - 0.988 - - - - - si:ch211-81a5.8 [Source:ZFIN;Acc:ZDB-GENE-060503-138]
21. zgc:154075 ENSDARG00000067630 284 0.988 - - - 0.988 - - - - - zgc:154075 [Source:ZFIN;Acc:ZDB-GENE-060929-910]
22. cyp2aa11 ENSDARG00000103456 42 0.987 - - - 0.987 - - - - - cytochrome P450, family 2, subfamily AA, polypeptide 11 [Source:ZFIN;Acc:ZDB-GENE-110114-3]
23. ptprz1b ENSDARG00000020871 435 0.987 - - - 0.987 - - - - - protein tyrosine phosphatase, receptor-type, Z polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-050506-100]
24. chrnb3a ENSDARG00000052764, ENSDARG00000112769 139 0.986 - - - 0.986 - - - - - cholinergic receptor, nicotinic, beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040108-1]
25. dnajc28 ENSDARG00000018181, ENSDARG00000114383 134 0.986 - - - 0.986 - - - - - DnaJ (Hsp40) homolog, subfamily C, member 28 [Source:ZFIN;Acc:ZDB-GENE-050417-130]
26. CU928220.1 CU928220.1 146 0.984 - - - 0.984 - - - - -
27. aatka ENSDARG00000078222 218 0.984 - - - 0.984 - - - - - apoptosis-associated tyrosine kinase a [Source:ZFIN;Acc:ZDB-GENE-100812-4]
28. cyp2v1 ENSDARG00000018485 694 0.983 - - - 0.983 - - - - - cytochrome P450, family 2, subfamily V, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040912-139]
29. rassf9 ENSDARG00000074721 448 0.983 - - - 0.983 - - - - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 9 [Source:ZFIN;Acc:ZDB-GENE-091204-470]
30. ift57 ENSDARG00000021022 288 0.983 - - - 0.983 - - - - - intraflagellar transport 57 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040614-1]
31. C9H3orf70 C9H3orf70 225 0.981 - - - 0.981 - - - - -
32. wdfy2 ENSDARG00000040453 406 0.98 - - - 0.980 - - - - - WD repeat and FYVE domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041111-211]
33. CABZ01081897.1 ENSDARG00000110500 253 0.98 - - - 0.980 - - - - -
34. lingo4b ENSDARG00000078527 235 0.98 - - - 0.980 - - - - - leucine rich repeat and Ig domain containing 4b [Source:ZFIN;Acc:ZDB-GENE-091214-3]
35. CU861664.1 CU861664.1 53 0.976 - - - 0.976 - - - - -
36. stim1b ENSDARG00000061560 146 0.975 - - - 0.975 - - - - - stromal interaction molecule 1b [Source:ZFIN;Acc:ZDB-GENE-060531-4]
37. spop ENSDARG00000100519 177 0.975 - - - 0.975 - - - - - speckle-type POZ protein [Source:ZFIN;Acc:ZDB-GENE-040426-1378]
38. zgc:195282 ENSDARG00000079488 475 0.975 - - - 0.975 - - - - - zgc:195282 [Source:ZFIN;Acc:ZDB-GENE-081022-208]
39. dars2 ENSDARG00000060861 137 0.974 - - - 0.974 - - - - - aspartyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-070912-443]
40. memo1 ENSDARG00000010823 1681 0.974 - - - 0.974 - - - - - mediator of cell motility 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5571]
41. wacb ENSDARG00000099015 146 0.974 - - - 0.974 - - - - - WW domain containing adaptor with coiled-coil b [Source:ZFIN;Acc:ZDB-GENE-041010-46]
42. mrpl20 ENSDARG00000090462 791 0.97 - - - 0.970 - - - - - mitochondrial ribosomal protein L20 [Source:ZFIN;Acc:ZDB-GENE-030131-5299]
43. fam203a fam203a 570 0.967 - - - 0.967 - - - - -
44. pparaa ENSDARG00000031777 216 0.967 - - - 0.967 - - - - - peroxisome proliferator-activated receptor alpha a [Source:ZFIN;Acc:ZDB-GENE-041210-169]
45. nfybb ENSDARG00000045611, ENSDARG00000110926 350 0.966 - - - 0.966 - - - - - nuclear transcription factor Y, beta b [Source:ZFIN;Acc:ZDB-GENE-050306-25]
46. eif4enif1 ENSDARG00000016177 238 0.966 - - - 0.966 - - - - - eukaryotic translation initiation factor 4E nuclear import factor 1 [Source:ZFIN;Acc:ZDB-GENE-050320-113]
47. usp33 ENSDARG00000016163 651 0.965 - - - 0.965 - - - - - ubiquitin specific peptidase 33 [Source:ZFIN;Acc:ZDB-GENE-040426-2323]
48. ptprua ENSDARG00000092638 479 0.962 - - - 0.962 - - - - - protein tyrosine phosphatase, receptor type, U, a [Source:ZFIN;Acc:ZDB-GENE-060503-232]
49. erbb2ip 403 0.962 - - - 0.962 - - - - - erbb2 interacting protein, transcript variant X3
50. gpr146 ENSDARG00000059610 810 0.961 - - - 0.961 - - - - - G protein-coupled receptor 146 [Source:ZFIN;Acc:ZDB-GENE-050823-3]
51. immp1l ENSDARG00000045935 175 0.961 - - - 0.961 - - - - - inner mitochondrial membrane peptidase subunit 1 [Source:ZFIN;Acc:ZDB-GENE-070522-4]
52. cant1a ENSDARG00000012192 1324 0.96 - - - 0.960 - - - - - calcium activated nucleotidase 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2441]
53. rela ENSDARG00000098696 889 0.96 - - - 0.960 - - - - - v-rel avian reticuloendotheliosis viral oncogene homolog A [Source:ZFIN;Acc:ZDB-GENE-040825-4]
54. C12H10orf71 C12H10orf71 595 0.96 - - - 0.960 - - - - -
55. tmie ENSDARG00000069423 305 0.957 - - - 0.957 - - - - - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
56. si:dkey-9i23.15 ENSDARG00000093997 544 0.957 - - - 0.957 - - - - - si:dkey-9i23.15 [Source:ZFIN;Acc:ZDB-GENE-090313-361]
57. ercc5 ENSDARG00000023678 468 0.956 - - - 0.956 - - - - - excision repair cross-complementation group 5 [Source:ZFIN;Acc:ZDB-GENE-050327-28]
58. CU074314.1 CU074314.1 354 0.955 - - - 0.955 - - - - -
59. CR627484.1 CR627484.1 452 0.951 - - - 0.951 - - - - -
60. acap1 ENSDARG00000056346, ENSDARG00000109603 274 0.949 - - - 0.949 - - - - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 1 [Source:ZFIN;Acc:ZDB-GENE-070112-1242]
61. rnf181 ENSDARG00000023958 270 0.947 - - - 0.947 - - - - - ring finger protein 181 [Source:ZFIN;Acc:ZDB-GENE-040426-1024]
62. fbxo44 ENSDARG00000022623, ENSDARG00000114432 406 0.946 - - - 0.946 - - - - - F-box protein 44 [Source:ZFIN;Acc:ZDB-GENE-041212-85]
63. mov10b.1 ENSDARG00000061177 370 0.946 - - - 0.946 - - - - - Moloney leukemia virus 10b, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9089]
64. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 0.946 - - - 0.946 - - - - - contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
65. TTF1_1 TTF1_1 299 0.946 - - - 0.946 - - - - -
66. plag1 ENSDARG00000051926 275 0.945 - - - 0.945 - - - - - pleiomorphic adenoma gene 1 [Source:ZFIN;Acc:ZDB-GENE-060302-2]
67. asap2b ENSDARG00000019564 1660 0.944 - - - 0.944 - - - - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5060]
68. trim32 ENSDARG00000102505 306 0.944 - - - 0.944 - - - - - tripartite motif containing 32 [Source:ZFIN;Acc:ZDB-GENE-060428-1]
69. nrg1 ENSDARG00000104314 1081 0.944 - - - 0.944 - - - - - neuregulin 1 [Source:ZFIN;Acc:ZDB-GENE-050302-113]
70. NBR1 NBR1 752 0.943 - - - 0.943 - - - - -
71. gapvd1 ENSDARG00000090183, ENSDARG00000113177 611 0.943 - - - 0.943 - - - - - GTPase activating protein and VPS9 domains 1 [Source:ZFIN;Acc:ZDB-GENE-040718-117]
72. ptrh2 ENSDARG00000077339, ENSDARG00000111027 211 0.942 - - - 0.942 - - - - - peptidyl-tRNA hydrolase 2 [Source:ZFIN;Acc:ZDB-GENE-050522-163]
73. hs3st1l2 ENSDARG00000035578 279 0.941 - - - 0.941 - - - - - heparan sulfate (glucosamine) 3-O-sulfotransferase 1-like 2 [Source:ZFIN;Acc:ZDB-GENE-070202-3]
74. BAD BAD 1322 0.941 - - - 0.941 - - - - -
75. si:dkeyp-4f2.5 si:dkeyp-4f2.5 232 0.941 - - - 0.941 - - - - -
76. pou4f1 ENSDARG00000005559 821 0.94 - - - 0.940 - - - - - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
77. nsun5 ENSDARG00000043209 764 0.939 - - - 0.939 - - - - - NOP2/Sun domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2476]
78. gtdc1 ENSDARG00000020642 299 0.939 - - - 0.939 - - - - - glycosyltransferase-like domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050417-8]
79. nrp2b ENSDARG00000038446 783 0.939 - - - 0.939 - - - - - neuropilin 2b [Source:ZFIN;Acc:ZDB-GENE-040611-3]
80. rpl3 ENSDARG00000003599 797 0.938 - - - 0.938 - - - - - ribosomal protein L3 [Source:ZFIN;Acc:ZDB-GENE-030131-1291]
81. HYAL1 ENSDARG00000059916 134 0.936 - - - 0.936 - - - - - hyaluronoglucosaminidase 1 [Source:ZFIN;Acc:ZDB-GENE-060312-42]
82. zgc:171459 ENSDARG00000077248 224 0.936 - - - 0.936 - - - - - zgc:171459 [Source:ZFIN;Acc:ZDB-GENE-030131-2059]
83. rad17 ENSDARG00000018918 332 0.933 - - - 0.933 - - - - - RAD17 checkpoint clamp loader component [Source:ZFIN;Acc:ZDB-GENE-040718-409]
84. nrg2a ENSDARG00000077818 854 0.932 - - - 0.932 - - - - - neuregulin 2a [Source:ZFIN;Acc:ZDB-GENE-070615-10]
85. nubpl ENSDARG00000054821 232 0.93 - - - 0.930 - - - - - nucleotide binding protein-like [Source:ZFIN;Acc:ZDB-GENE-040718-140]
86. adam17b ENSDARG00000093093 792 0.929 - - - 0.929 - - - - - ADAM metallopeptidase domain 17b [Source:ZFIN;Acc:ZDB-GENE-041001-199]
87. POMK ENSDARG00000003208, ENSDARG00000112152 529 0.929 - - - 0.929 - - - - - protein-O-mannose kinase [Source:ZFIN;Acc:ZDB-GENE-041114-119]
88. si:dkey-272j9.2 si:dkey-272j9.2 91 0.929 - - - 0.929 - - - - -
89. RAB11FIP5 RAB11FIP5 626 0.928 - - - 0.928 - - - - -
90. NECAB3 ENSDARG00000074794 379 0.926 - - - 0.926 - - - - - N-terminal EF-hand calcium binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-131121-74]
91. ppm1ba ENSDARG00000001888 319 0.925 - - - 0.925 - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1Ba [Source:ZFIN;Acc:ZDB-GENE-991102-16]
92. map9 ENSDARG00000037276, ENSDARG00000115648 581 0.924 - - - 0.924 - - - - - microtubule-associated protein 9 [Source:ZFIN;Acc:ZDB-GENE-080225-36]
93. gfra2a ENSDARG00000042723 592 0.924 - - - 0.924 - - - - - GDNF family receptor alpha 2a [Source:ZFIN;Acc:ZDB-GENE-040630-1]
94. galt ENSDARG00000069543 473 0.924 - - - 0.924 - - - - - galactose-1-phosphate uridylyltransferase [Source:ZFIN;Acc:ZDB-GENE-070112-172]
95. cog3 ENSDARG00000101999 646 0.923 - - - 0.923 - - - - - component of oligomeric golgi complex 3 [Source:ZFIN;Acc:ZDB-GENE-050913-26]
96. guk1a ENSDARG00000030340 517 0.923 - - - 0.923 - - - - - guanylate kinase 1a [Source:ZFIN;Acc:ZDB-GENE-040625-130]
97. ERRFI1 ERRFI1 664 0.922 - - - 0.922 - - - - -
98. matn3b ENSDARG00000069265 856 0.922 - - - 0.922 - - - - - matrilin 3b [Source:ZFIN;Acc:ZDB-GENE-050221-9]
99. stambpl1 ENSDARG00000003085 665 0.919 - - - 0.919 - - - - - STAM binding protein-like 1 [Source:ZFIN;Acc:ZDB-GENE-100215-4]
100. srpx ENSDARG00000010318 946 0.917 - - - 0.917 - - - - - sushi-repeat containing protein X-linked [Source:ZFIN;Acc:ZDB-GENE-050327-43]

There are 260 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA