Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for pou4f1

Gene Name Gene ID Reads Annotation
pou4f1 ENSDARG00000005559 821 POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]










Genes with expression patterns similar to pou4f1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pou4f1 ENSDARG00000005559 821 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
2. TUBB8P7_1 TUBB8P7_1 2722 3.536 0.910 - - - - 0.909 0.983 0.734 -
3. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 3.512 0.781 - - 0.949 - 0.813 0.969 - - contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
4. mdkb ENSDARG00000020708 5393 3.508 0.967 - - - 0.909 0.778 0.854 - - midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
5. snap25b ENSDARG00000058117 469 3.495 0.816 - - 0.821 - 0.970 0.888 - - synaptosomal-associated protein, 25b [Source:ZFIN;Acc:ZDB-GENE-980526-392]
6. gsx1 ENSDARG00000035735 1243 3.487 0.813 - - - - 0.903 0.966 - 0.805 GS homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-041008-135]
7. lhx1a ENSDARG00000014018 958 3.474 0.788 - - 0.867 - 0.875 0.944 - - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
8. stx1b ENSDARG00000000503 2724 3.345 0.829 - - 0.700 - 0.840 0.976 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
9. calb1 ENSDARG00000031598 252 3.324 0.863 - - - - 0.872 0.810 0.779 - calbindin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8107]
10. necap1 ENSDARG00000020798 612 3.304 0.771 - - - - 0.844 0.967 0.722 - NECAP endocytosis associated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1682]
11. lhx5 ENSDARG00000057936 785 2.81 0.963 - - - - 0.864 0.983 - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
12. rbfox3 rbfox3 1443 2.794 0.909 - - - - 0.932 0.953 - -
13. slc6a5_1 ENSDARG00000067964, ENSDARG00000111378 1111 2.794 0.927 - - - - 0.906 0.961 - - solute carrier family 6 (neurotransmitter transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-050105-2]
14. slc1a2b ENSDARG00000102453 3136 2.783 0.896 - - - - 0.946 0.941 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
15. snap25a ENSDARG00000020609 4537 2.771 0.913 - - - - 0.893 0.965 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
16. dpysl3 ENSDARG00000002587 4381 2.756 0.909 - - - - 0.891 0.956 - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
17. cadm3 ENSDARG00000057013 1545 2.756 0.924 - - - - 0.877 0.955 - - cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
18. adam11 ENSDARG00000079204 298 2.749 0.955 - - - - 0.933 0.861 - - ADAM metallopeptidase domain 11 [Source:ZFIN;Acc:ZDB-GENE-070808-3]
19. scn8ab ENSDARG00000018032, ENSDARG00000112543 883 2.746 0.896 - - - - 0.910 0.940 - - sodium channel, voltage gated, type VIII, alpha subunit b [Source:ZFIN;Acc:ZDB-GENE-060906-2]
20. scn8aa ENSDARG00000005775 792 2.746 0.914 - - - - 0.929 0.903 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
21. STMN3 ENSDARG00000038465 1009 2.739 0.859 - - 0.903 - - 0.977 - - stathmin-like 3 [Source:ZFIN;Acc:ZDB-GENE-081124-2]
22. gap43 ENSDARG00000099744 4114 2.732 0.967 - - - - 0.847 0.918 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
23. PDZD4 ENSDARG00000090564 131 2.72 0.894 - - - - 0.904 0.922 - - PDZ domain containing 4 [Source:HGNC Symbol;Acc:HGNC:21167]
24. elavl4 ENSDARG00000045639 998 2.715 0.930 - - - - 0.811 0.974 - - ELAV like neuron-specific RNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-990415-246]
25. rusc1 ENSDARG00000078125 617 2.715 0.890 - - - - 0.949 0.876 - - RUN and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100922-274]
26. cdk5r1b ENSDARG00000045087 2075 2.71 0.927 - - - - 0.831 0.952 - - cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]
27. TUSC5 TUSC5 1436 2.706 0.942 - - - - 0.835 0.929 - -
28. olfm1b ENSDARG00000014053 1392 2.703 0.847 - - - - 0.896 0.960 - - olfactomedin 1b [Source:ZFIN;Acc:ZDB-GENE-040801-228]
29. rab3ab ENSDARG00000043835 1267 2.7 0.874 - - - - 0.836 0.990 - - RAB3A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-041210-268]
30. atp2b3b ENSDARG00000023445 1424 2.693 0.943 - - - - 0.846 0.904 - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
31. stmn2a ENSDARG00000033234 2272 2.693 0.959 - - - - 0.790 0.944 - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
32. scn2b ENSDARG00000101713 796 2.691 0.825 - - - - 0.881 0.985 - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
33. SPOCK1 ENSDARG00000074644 794 2.689 0.834 - - - - 0.905 0.950 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
34. ATP6AP1L ATP6AP1L 164 2.676 0.862 - - - - 0.883 0.931 - -
35. syt3 ENSDARG00000075830 430 2.676 0.847 - - - - 0.963 0.866 - - synaptotagmin III [Source:ZFIN;Acc:ZDB-GENE-090601-1]
36. MAPK8IP1_1 MAPK8IP1_1 186 2.675 0.957 - - - - 0.812 0.906 - -
37. tuba1c ENSDARG00000055216 8384 2.674 0.815 - - - - 0.884 0.975 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
38. adam23a ENSDARG00000062323 580 2.671 0.909 - - - - 0.857 0.905 - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
39. MAP1A MAP1A 847 2.67 0.898 - - - - 0.839 0.933 - -
40. si:ch211-11c15.3 si:ch211-11c15.3 1279 2.669 0.866 - - - - 0.870 0.933 - -
41. nrn1a ENSDARG00000071860 1311 2.668 0.927 - - - - 0.814 0.927 - - neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
42. adcyap1b ENSDARG00000027740 1539 2.666 0.973 - - - - 0.925 0.768 - - adenylate cyclase activating polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-041010-89]
43. gng3 ENSDARG00000009553 2530 2.651 0.866 - - - - 0.818 0.967 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
44. dbx2 2971 2.651 0.820 - - - - 0.848 0.983 - - developing brain homeobox 2
45. pou4f2 ENSDARG00000069737 451 2.651 0.832 - - - - 0.962 0.857 - - POU class 4 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-040401-1]
46. hpca ENSDARG00000018397, ENSDARG00000110115 3866 2.647 0.976 - - - - 0.761 0.910 - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
47. sypb ENSDARG00000002230 262 2.641 0.838 - - - - 0.845 0.958 - - synaptophysin b [Source:ZFIN;Acc:ZDB-GENE-040718-205]
48. INA INA 950 2.64 0.865 - - - - 0.841 0.934 - -
49. mllt11 ENSDARG00000071026 2518 2.637 0.871 - - - - 0.862 0.904 - - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
50. cspg5a ENSDARG00000069981 1699 2.635 0.843 - - - - 0.838 0.954 - - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
51. slc32a1 ENSDARG00000059775 1092 2.625 0.789 - - - - 0.885 0.951 - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
52. calb2a ENSDARG00000041062, ENSDARG00000110220 459 2.625 0.766 - - - - 0.876 0.983 - - calbindin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1677]
53. slc1a3a ENSDARG00000104431 9888 2.621 0.897 - - - - 0.874 0.850 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
54. stmn1b ENSDARG00000033655 9491 2.62 0.904 - - - - 0.756 0.960 - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
55. atp2b3a ENSDARG00000043474, ENSDARG00000112865 914 2.619 0.911 - - - - 0.781 0.927 - - ATPase plasma membrane Ca2+ transporting 3a [Source:ZFIN;Acc:ZDB-GENE-040718-174]
56. pnoca ENSDARG00000025024 467 2.618 0.971 - - - - 0.738 0.909 - - prepronociceptin a [Source:ZFIN;Acc:ZDB-GENE-101229-1]
57. CAMSAP3 ENSDARG00000059475 263 2.614 0.859 - - - - 0.870 0.885 - - calmodulin regulated spectrin-associated protein family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060503-811]
58. Mar-09 Mar-09 126 2.61 0.885 - - - - 0.751 0.974 - -
59. SKOR2 SKOR2 1041 2.607 0.833 - - - - 0.838 0.936 - -
60. zic5 ENSDARG00000016022 1034 2.603 0.901 0.976 - - - - 0.726 - - zic family member 5 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040622-1]
61. gpr146 ENSDARG00000059610 810 2.599 0.911 - - 0.934 - 0.754 - - - G protein-coupled receptor 146 [Source:ZFIN;Acc:ZDB-GENE-050823-3]
62. dnajc5aa ENSDARG00000042948 2885 2.593 0.816 - - - - 0.853 0.924 - - DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
63. sncgb ENSDARG00000109715 1014 2.592 0.756 - - - - 0.860 0.976 - - synuclein, gamma b (breast cancer-specific protein 1) [Source:ZFIN;Acc:ZDB-GENE-050522-235]
64. nbeaa ENSDARG00000070080 862 2.59 0.787 - - - - 0.871 0.932 - - neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
65. atp6v1b2 ENSDARG00000043465, ENSDARG00000113422 682 2.588 0.844 - - - - 0.814 0.930 - - ATPase H+ transporting V1 subunit B2 [Source:ZFIN;Acc:ZDB-GENE-030711-4]
66. pcsk2 ENSDARG00000019451 442 2.586 0.937 - - 0.866 - 0.783 - - - proprotein convertase subtilisin/kexin type 2 [Source:ZFIN;Acc:ZDB-GENE-090608-1]
67. nefmb ENSDARG00000043697 2052 2.581 0.890 - - - - 0.831 0.860 - - neurofilament, medium polypeptide b [Source:ZFIN;Acc:ZDB-GENE-070103-4]
68. gabra5 ENSDARG00000070730 156 2.579 0.794 - - - - 0.813 0.972 - - gamma-aminobutyric acid (GABA) A receptor, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-081104-30]
69. amph ENSDARG00000007663 599 2.576 0.927 - - - - 0.711 0.938 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
70. scrt2 ENSDARG00000056175 4331 2.566 0.851 - - - - 0.804 0.911 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
71. sypa ENSDARG00000042974, ENSDARG00000110528 3217 2.565 0.773 - - - - 0.830 0.962 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
72. nadl1.1 1200 2.563 0.757 - - - - 0.825 0.981 - - neural adhesion molecule L1.1, transcript variant X1
73. SV2B SV2B 208 2.563 0.881 - - - - 0.717 0.965 - -
74. chrnb3a ENSDARG00000052764, ENSDARG00000112769 139 2.562 0.832 - - 0.937 - - 0.793 - - cholinergic receptor, nicotinic, beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040108-1]
75. celf4 ENSDARG00000070045 1537 2.562 0.851 - - - - 0.738 0.973 - - CUGBP, Elav-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-300]
76. cers6 ENSDARG00000053583 247 2.56 0.830 - - - - 0.753 0.977 - - ceramide synthase 6 [Source:ZFIN;Acc:ZDB-GENE-070522-1]
77. b3gat2 ENSDARG00000030733 348 2.56 0.906 - - - - 0.835 0.819 - - beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S) [Source:ZFIN;Acc:ZDB-GENE-040801-191]
78. bhlhe22 ENSDARG00000058039 1673 2.559 0.837 - - - - 0.776 0.946 - - basic helix-loop-helix family, member e22 [Source:ZFIN;Acc:ZDB-GENE-040426-1411]
79. stmn2b ENSDARG00000070537 1586 2.558 0.836 - - - - 0.921 0.801 - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
80. si:dkeyp-117h8.2 ENSDARG00000011602 260 2.557 - - - 0.802 - 0.851 0.904 - - si:dkeyp-117h8.2 [Source:ZFIN;Acc:ZDB-GENE-041210-321]
81. fgf13b ENSDARG00000056633 455 2.556 0.853 - - - - 0.868 0.835 - - fibroblast growth factor 13b [Source:ZFIN;Acc:ZDB-GENE-040426-1793]
82. syngr3a ENSDARG00000014871 405 2.556 0.907 - - - - 0.789 0.860 - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
83. itm2ca ENSDARG00000043448 1265 2.551 - - - 0.770 - 0.792 0.989 - - integral membrane protein 2Ca [Source:ZFIN;Acc:ZDB-GENE-040718-284]
84. syt11a ENSDARG00000057913 1145 2.55 0.820 - - - - 0.785 0.945 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
85. clstn3 ENSDARG00000073883 590 2.55 0.764 - - - - 0.842 0.944 - - calsyntenin 3 [Source:ZFIN;Acc:ZDB-GENE-100921-73]
86. sh3gl2 sh3gl2 1305 2.547 0.789 - - - - 0.819 0.939 - -
87. her2 ENSDARG00000038205 3219 2.542 0.800 - - - - - 0.950 - 0.792 hairy-related 2 [Source:ZFIN;Acc:ZDB-GENE-980526-274]
88. AKT3 AKT3 1729 2.541 - - - - - 0.865 0.968 0.708 -
89. CU570681.1 CU570681.1 512 2.541 0.882 - - 0.872 - - 0.787 - -
90. zic4 ENSDARG00000031307 1228 2.538 0.850 - - - - 0.870 0.818 - - zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]
91. vsnl1a ENSDARG00000023228 1584 2.537 0.771 - - - - 0.862 0.904 - - visinin-like 1a [Source:ZFIN;Acc:ZDB-GENE-041001-211]
92. epha4b ENSDARG00000011600 3110 2.536 0.737 - - - - 0.851 0.948 - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
93. s1pr1 ENSDARG00000042690, ENSDARG00000113842, ENSDARG00000116038 2510 2.534 0.800 - - - - 0.916 0.818 - - sphingosine-1-phosphate receptor 1 [Source:ZFIN;Acc:ZDB-GENE-001228-2]
94. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 2.533 0.776 - - - - 0.801 0.956 - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
95. sez6l2 ENSDARG00000076052 360 2.533 0.727 - - - - 0.838 0.968 - - seizure related 6 homolog (mouse)-like 2 [Source:ZFIN;Acc:ZDB-GENE-091204-189]
96. slc8a2b ENSDARG00000100592 598 2.531 0.730 - - - - 0.834 0.967 - - solute carrier family 8 (sodium/calcium exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-050419-209]
97. fsd1 ENSDARG00000062017 207 2.531 0.837 - - - - 0.799 0.895 - - fibronectin type III and SPRY domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-218]
98. ckbb ENSDARG00000043257 3503 2.529 0.753 - - - - 0.882 0.894 - - creatine kinase, brain b [Source:ZFIN;Acc:ZDB-GENE-020103-2]
99. pcdh1gc5 ENSDARG00000104826 10052 2.527 0.738 - - - - 0.834 0.955 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
100. evx2 ENSDARG00000059255 317 2.521 0.794 - - - - 0.891 0.836 - - even-skipped homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-980526-215]

There are 2889 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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