Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-111e8.5

Gene Name Gene ID Reads Annotation
si:dkey-111e8.5 ENSDARG00000093960 28 si:dkey-111e8.5 [Source:ZFIN;Acc:ZDB-GENE-060526-192]










Genes with expression patterns similar to si:dkey-111e8.5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-111e8.5 ENSDARG00000093960 28 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:dkey-111e8.5 [Source:ZFIN;Acc:ZDB-GENE-060526-192]
2. neu3.2 ENSDARG00000010047, ENSDARG00000117176 68 2.478 - 0.791 - - 0.803 0.884 - - - sialidase 3 (membrane sialidase), tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040801-262]
3. EFEMP1 32 1.904 - - - - - 0.904 1.000 - - EGF containing fibulin-like extracellular matrix protein 1, transcript variant X1
4. ARHGEF40 ENSDARG00000078979 25 1.814 - 0.930 - - - 0.884 - - - Rho guanine nucleotide exchange factor (GEF) 40 [Source:ZFIN;Acc:ZDB-GENE-110623-2]
5. abca4a ENSDARG00000057169 27 1.793 1.000 0.793 - - - - - - - ATP-binding cassette, sub-family A (ABC1), member 4a [Source:ZFIN;Acc:ZDB-GENE-050517-3]
6. hbaa2 ENSDARG00000069735 10 1.786 1.000 - - 0.786 - - - - - hemoglobin, alpha adult 2 [Source:ZFIN;Acc:ZDB-GENE-081104-38]
7. si:dkey-203c4.2 si:dkey-203c4.2 4 1.772 1.000 0.772 - - - - - - -
8. pdzk1ip1l pdzk1ip1l 171 1.752 - 0.864 - - - - 0.888 - -
9. si:dkeyp-82h4.2 si:dkeyp-82h4.2 494 1.746 1.000 0.746 - - - - - - -
10. ankrd1b ENSDARG00000076192 204 1.746 1.000 0.746 - - - - - - - ankyrin repeat domain 1b (cardiac muscle) [Source:ZFIN;Acc:ZDB-GENE-070820-13]
11. AC024175.11 AC024175.11 12 1.746 1.000 0.746 - - - - - - -
12. zgc:172051 ENSDARG00000086569 12 1.74 - 0.856 - - - 0.884 - - - zgc:172051 [Source:ZFIN;Acc:ZDB-GENE-080219-23]
13. efhc2 ENSDARG00000004204 59 1.73 - 0.930 - - - - 0.800 - - EF-hand domain (C-terminal) containing 2 [Source:ZFIN;Acc:ZDB-GENE-031001-10]
14. zgc:113142 ENSDARG00000038969 74 1.726 1.000 0.726 - - - - - - - zgc:113142 [Source:ZFIN;Acc:ZDB-GENE-050220-2]
15. si:ch211-240l19.6 ENSDARG00000074613, ENSDARG00000115536 7 1.724 1.000 - 0.724 - - - - - - si:ch211-240l19.6 [Source:ZFIN;Acc:ZDB-GENE-041210-328]
16. cdh4_1 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 13 1.719 1.000 - - - 0.719 - - - - cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]
17. FBXL21 FBXL21 6 1.713 - 0.746 - - 0.967 - - - -
18. pms2 ENSDARG00000075672, ENSDARG00000115929 248 1.695 - 0.905 - - - - 0.790 - - PMS1 homolog 2, mismatch repair system component [Source:ZFIN;Acc:ZDB-GENE-030131-686]
19. si:dkeyp-41f9.3 ENSDARG00000075600 2 1.687 - - - - 0.803 0.884 - - - si:dkeyp-41f9.3 [Source:ZFIN;Acc:ZDB-GENE-091118-56]
20. zmp:0000001267 ENSDARG00000089192 12 1.686 - 0.867 - - - 0.819 - - - zmp:0000001267 [Source:ZFIN;Acc:ZDB-GENE-140106-227]
21. zgc:162184 ENSDARG00000077217 47 1.681 - 0.793 - - - 0.888 - - - zgc:162184 [Source:ZFIN;Acc:ZDB-GENE-070424-83]
22. dclk3 ENSDARG00000078997 2 1.663 0.917 0.746 - - - - - - - doublecortin-like kinase 3 [Source:ZFIN;Acc:ZDB-GENE-081104-224]
23. si:dkey-32m20.1 43 1.658 - - - - - 0.822 0.836 - - si:dkey-32m20.1
24. crfb4 ENSDARG00000068711 51 1.638 - - - - - 0.884 0.754 - - cytokine receptor family member b4 [Source:ZFIN;Acc:ZDB-GENE-070905-3]
25. si:ch211-73m21.1 ENSDARG00000096491 10 1.63 - 0.746 - - - 0.884 - - - si:ch211-73m21.1 [Source:ZFIN;Acc:ZDB-GENE-120709-61]
26. atad1b ENSDARG00000056609 40 1.63 - 0.746 - - - 0.884 - - - ATPase family, AAA domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-030616-44]
27. AKNA_1 AKNA_1 2 1.63 - 0.746 - - - 0.884 - - -
28. MCOLN2 ENSDARG00000098918 12 1.63 - 0.746 - - - 0.884 - - - mucolipin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-692]
29. si:ch211-102g22.3 si:ch211-102g22.3 2 1.63 - 0.746 - - - 0.884 - - -
30. mfsd4b ENSDARG00000079571 556 1.624 - 0.759 - - - - 0.865 - - major facilitator superfamily domain containing 4B [Source:ZFIN;Acc:ZDB-GENE-070410-26]
31. si:dkeyp-73a2.2 ENSDARG00000079785 313 1.612 - 0.846 - - - - 0.766 - - si:dkeyp-73a2.2 [Source:NCBI gene;Acc:100307112]
32. ggt1b ENSDARG00000018342 49 1.61 - 0.867 - - - - 0.743 - - gamma-glutamyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-110408-13]
33. STK31 ENSDARG00000056339 37 1.609 0.725 - - - - 0.884 - - - serine/threonine kinase 31 [Source:ZFIN;Acc:ZDB-GENE-140106-59]
34. zgc:92594 ENSDARG00000089517 83 1.596 0.782 - - - - - 0.814 - - zgc:92594 [Source:ZFIN;Acc:ZDB-GENE-040718-482]
35. slc13a5 slc13a5 15 1.579 - 0.782 - - - - 0.797 - -
36. slc6a6b ENSDARG00000098438 7 1.575 - 0.772 - - 0.803 - - - - solute carrier family 6 (neurotransmitter transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030131-3077]
37. PRODH PRODH 13 1.572 - 0.746 - - - - 0.826 - -
38. ARG1 ENSDARG00000057429, ENSDARG00000110741 45 1.571 - 0.746 - - - - 0.825 - - arginase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-181]
39. AK9 ENSDARG00000021913 53 1.569 - 0.772 - - - - 0.797 - - adenylate kinase 9 [Source:ZFIN;Acc:ZDB-GENE-041014-337]
40. slc2a1a ENSDARG00000001437, ENSDARG00000116129 1614 1.564 - 0.789 - - - - 0.775 - - solute carrier family 2 (facilitated glucose transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3158]
41. nr4a2a ENSDARG00000017007 140 1.555 - 0.772 - - 0.783 - - - - nuclear receptor subfamily 4, group A, member 2a [Source:ZFIN;Acc:ZDB-GENE-990415-184]
42. FP236789.1 ENSDARG00000105406 57 1.551 - - - - - 0.813 0.738 - -
43. SLCO5A1 SLCO5A1 6 1.549 - 0.746 - - 0.803 - - - -
44. ZC3H12A ENSDARG00000005271 5 1.549 - 0.746 - - 0.803 - - - - zinc finger CCCH-type containing 12A [Source:ZFIN;Acc:ZDB-GENE-110411-6]
45. si:dkey-9a20.8 si:dkey-9a20.8 8 1.549 - 0.746 - - 0.803 - - - -
46. CIT_1 CIT_1 6 1.549 - 0.746 - - 0.803 - - - -
47. CU457819.2 ENSDARG00000105374 8 1.549 - 0.746 - - 0.803 - - - - Histone H3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q4QRF4]
48. PSTPIP2 ENSDARG00000089569 1 1.549 - 0.746 - - 0.803 - - - - proline-serine-threonine phosphatase interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-091204-90]
49. si:dkey-153k10.6 10 1.548 - - - - 0.803 - 0.745 - - si:dkey-153k10.6, transcript variant X1
50. allc ENSDARG00000042562 12 1.546 - - - - - 0.790 - 0.756 - allantoicase [Source:ZFIN;Acc:ZDB-GENE-040718-471]
51. fam46bb 601 1.524 0.751 0.773 - - - - - - - family with sequence similarity 46, member Bb
52. spp1 ENSDARG00000044276 34 1.512 - - - - - 0.748 0.764 - - secreted phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-050706-97]
53. CR762436.1 ENSDARG00000112375 636 1.507 - 0.759 - - - 0.748 - - - Histone H3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q4QRF4]
54. ftr59 ENSDARG00000095864, ENSDARG00000116989 25 1.507 - 0.793 - - - 0.714 - - - finTRIM family, member 59 [Source:ZFIN;Acc:ZDB-GENE-090508-4]
55. AL935174.1 ENSDARG00000109674 18 1.494 - 0.746 - - - 0.748 - - -
56. aqp8b_1 ENSDARG00000089749 586 1.489 - 0.752 - - - - 0.737 - - aquaporin 8b [Source:ZFIN;Acc:ZDB-GENE-080220-47]
57. dnal4b ENSDARG00000088841, ENSDARG00000112852, ENSDARG00000113376 303 1.473 0.718 - - - - 0.755 - - - dynein, axonemal, light chain 4b [Source:ZFIN;Acc:ZDB-GENE-050208-510]
58. SLC28A2 SLC28A2 21 1.468 - - - - - 0.750 0.718 - -
59. SMARCAD1 SMARCAD1 104 1 1.000 - - - - - - - -
60. syk ENSDARG00000008186 24 1 - - - - - 1.000 - - - spleen tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-040702-3]
61. si:dkeyp-4f2.3 ENSDARG00000096011, ENSDARG00000104584 5 1 - - - - 1.000 - - - - si:dkeyp-4f2.3 [Source:ZFIN;Acc:ZDB-GENE-110914-117]
62. CABZ01033130.1 CABZ01033130.1 5 1 1.000 - - - - - - - -
63. ak7b ENSDARG00000017023 25 1 1.000 - - - - - - - - adenylate kinase 7b [Source:ZFIN;Acc:ZDB-GENE-050309-170]
64. ptpn18 ENSDARG00000006308 7 1 1.000 - - - - - - - - protein tyrosine phosphatase, non-receptor type 18 [Source:ZFIN;Acc:ZDB-GENE-050320-12]
65. bon bon 20 1 1.000 - - - - - - - -
66. col17a1a ENSDARG00000069415 52 1 1.000 - - - - - - - - collagen, type XVII, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090313-107]
67. col17a1b ENSDARG00000079011 143 1 1.000 - - - - - - - - collagen, type XVII, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-7145]
68. zgc:172121 ENSDARG00000034430, ENSDARG00000116650 81 1 - - - - - 1.000 - - - zgc:172121 [Source:ZFIN;Acc:ZDB-GENE-030131-9545]
69. si:dkeyp-85d8.6 si:dkeyp-85d8.6 2 1 1.000 - - - - - - - -
70. si:ch73-27e22.5 si:ch73-27e22.5 10 1 1.000 - - - - - - - -
71. si:ch1073-162e11.2 si:ch1073-162e11.2 5 1 1.000 - - - - - - - -
72. spire2 ENSDARG00000003084 6 1 1.000 - - - - - - - - spire-type actin nucleation factor 2 [Source:ZFIN;Acc:ZDB-GENE-041114-29]
73. OTOG ENSDARG00000068460 60 1 1.000 - - - - - - - - otogelin [Source:ZFIN;Acc:ZDB-GENE-120228-1]
74. SCN1B SCN1B 191 1 1.000 - - - - - - - -
75. gc3 31 1 - - - - - 1.000 - - - guanylyl cyclase 3, transcript variant X2
76. zgc:162962 ENSDARG00000116765 29 1 1.000 - - - - - - - - zgc:162962 [Source:ZFIN;Acc:ZDB-GENE-070424-76]
77. pofut2 ENSDARG00000045175 6 1 1.000 - - - - - - - - protein O-fucosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3595]
78. CABZ01067098.1 CABZ01067098.1 1 1 - - - - 1.000 - - - -
79. slc26a10 ENSDARG00000078800, ENSDARG00000114250 55 1 1.000 - - - - - - - - solute carrier family 26, member 10 [Source:ZFIN;Acc:ZDB-GENE-030131-9845]
80. BX005106.1 BX005106.1 22 1 1.000 - - - - - - - -
81. iffo1a ENSDARG00000062976 5 1 1.000 - - - - - - - - intermediate filament family orphan 1a [Source:ZFIN;Acc:ZDB-GENE-060503-418]
82. hepacam 73 1 1.000 - - - - - - - - hepatic and glial cell adhesion molecule, transcript variant X2
83. cacng7a ENSDARG00000063006 2 1 - - - - 1.000 - - - - calcium channel, voltage-dependent, gamma subunit 7a [Source:ZFIN;Acc:ZDB-GENE-060503-814]
84. dap1b_1 ENSDARG00000086842, ENSDARG00000109678 830 1 1.000 - - - - - - - - death associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-000511-4]
85. PAMR1 ENSDARG00000093480 40 1 1.000 - - - - - - - - peptidase domain containing associated with muscle regeneration 1 [Source:ZFIN;Acc:ZDB-GENE-100422-12]
86. si:ch73-223d24.4 si:ch73-223d24.4 5 1 1.000 - - - - - - - -
87. snoU13 snoU13 2 1 1.000 - - - - - - - -
88. fgf16 ENSDARG00000042233, ENSDARG00000110602 39 1 1.000 - - - - - - - - fibroblast growth factor 16 [Source:ZFIN;Acc:ZDB-GENE-060427-3]
89. pou6f2 ENSDARG00000086362 135 1 - - - - - 1.000 - - - POU class 6 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-091118-71]
90. SYNGAP1 SYNGAP1 4 1 - - - - - 1.000 - - -
91. ptchd1 ENSDARG00000018066 3 1 - - - - 1.000 - - - - patched domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-061220-1]
92. si:ch211-114l13.3 ENSDARG00000094346 2 1 1.000 - - - - - - - - si:ch211-114l13.3 [Source:ZFIN;Acc:ZDB-GENE-070424-112]
93. hsd11b2 ENSDARG00000001975 245 1 1.000 - - - - - - - - hydroxysteroid (11-beta) dehydrogenase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6030]
94. CABZ01079015.1 CABZ01079015.1 10 1 1.000 - - - - - - - -
95. si:ch211-196c10.11 si:ch211-196c10.11 2 1 1.000 - - - - - - - -
96. KCNMB3 KCNMB3 5 1 - - - - - 1.000 - - -
97. hmha1 hmha1 58 1 1.000 - - - - - - - -
98. CABZ01066695.1 CABZ01066695.1 12 1 1.000 - - - - - - - -
99. si:busm1-163l24.3 31 1 1.000 - - - - - - - - si:busm1-163l24.3
100. abcg4a ENSDARG00000061047 56 1 1.000 - - - - - - - - ATP-binding cassette, sub-family G (WHITE), member 4a [Source:ZFIN;Acc:ZDB-GENE-050517-39]

There are 1222 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA