Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for cdh4_1

Gene Name Gene ID Reads Annotation
cdh4_1 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 13 cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]










Genes with expression patterns similar to cdh4_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cdh4_1 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 13 7 1.000 1.000 1.000 1.000 1.000 1.000 - - 1.000 cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]
2. dnaaf2 ENSDARG00000103132 24 2 1.000 1.000 - - - - - - - dynein, axonemal, assembly factor 2 [Source:ZFIN;Acc:ZDB-GENE-050809-128]
3. ttr ENSDARG00000037191 11 1.969 1.000 - - 0.969 - - - - - transthyretin (prealbumin, amyloidosis type I) [Source:ZFIN;Acc:ZDB-GENE-040927-14]
4. calcr ENSDARG00000028845, ENSDARG00000109526 17 1.928 1.000 0.928 - - - - - - - calcitonin receptor [Source:ZFIN;Acc:ZDB-GENE-060503-420]
5. GRID1 GRID1 51 1.917 1.000 0.917 - - - - - - -
6. PAMR1 ENSDARG00000093480 40 1.914 1.000 0.914 - - - - - - - peptidase domain containing associated with muscle regeneration 1 [Source:ZFIN;Acc:ZDB-GENE-100422-12]
7. iqcc ENSDARG00000092483 65 1.823 0.917 0.906 - - - - - - - IQ motif containing C [Source:ZFIN;Acc:ZDB-GENE-090313-325]
8. si:ch211-141e20.5 si:ch211-141e20.5 7 1.802 - 1.000 - 0.802 - - - - -
9. bon bon 20 1.778 1.000 - - - 0.778 - - - -
10. blnk ENSDARG00000042722 56 1.761 - 1.000 - - - 0.761 - - - B cell linker [Source:ZFIN;Acc:ZDB-GENE-040702-4]
11. s100b ENSDARG00000057598 41 1.754 0.826 0.928 - - - - - - - S100 calcium binding protein, beta (neural) [Source:ZFIN;Acc:ZDB-GENE-040718-290]
12. spi1b ENSDARG00000000767 88 1.73 - 1.000 - 0.730 - - - - - Spi-1 proto-oncogene b [Source:ZFIN;Acc:ZDB-GENE-980526-164]
13. d2hgdh ENSDARG00000060210 362 1.73 0.883 0.847 - - - - - - - D-2-hydroxyglutarate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-070112-482]
14. si:dkeyp-4f2.3 ENSDARG00000096011, ENSDARG00000104584 5 1.719 - 1.000 - - 0.719 - - - - si:dkeyp-4f2.3 [Source:ZFIN;Acc:ZDB-GENE-110914-117]
15. si:dkey-111e8.5 ENSDARG00000093960 28 1.719 1.000 - - - 0.719 - - - - si:dkey-111e8.5 [Source:ZFIN;Acc:ZDB-GENE-060526-192]
16. CR936465.1 CR936465.1 7 1.713 - - - 0.969 0.744 - - - -
17. CU571315.2 ENSDARG00000101956 15 1.708 - 1.000 - - - 0.708 - - -
18. CU469532.1 CU469532.1 31 1.708 - 1.000 - - - 0.708 - - -
19. polr2b ENSDARG00000098783 90 1.704 - 1.000 - - - - - - 0.704 polymerase (RNA) II (DNA directed) polypeptide B [Source:ZFIN;Acc:ZDB-GENE-041008-1]
20. CR376787.3 CR376787.3 11 1.7 - - - 0.968 - - - - 0.732
21. si:ch211-15j21.2 si:ch211-15j21.2 13 1.638 - 0.906 - - - - - - 0.732
22. BRSK2 BRSK2 66 1.608 0.840 0.768 - - - - - - -
23. si:dkey-209n16.2 ENSDARG00000095914 27 1.602 - 0.858 - 0.744 - - - - - si:dkey-209n16.2 [Source:ZFIN;Acc:ZDB-GENE-110408-44]
24. BX005472.1 BX005472.1 2 1.558 - - - - 0.850 0.708 - - -
25. TRIM14_10 TRIM14_10 9 1.553 - - 0.701 0.852 - - - - -
26. tsnax ENSDARG00000115282 99 1.504 0.702 - - - - 0.802 - - - translin-associated factor X [Source:ZFIN;Acc:ZDB-GENE-050913-80]
27. MPP3 MPP3 13 1.471 - - 0.763 - - 0.708 - - -
28. STK31 ENSDARG00000056339 37 1.433 0.725 - - - - 0.708 - - - serine/threonine kinase 31 [Source:ZFIN;Acc:ZDB-GENE-140106-59]
29. FAM163A_1 ENSDARG00000093021 6 1 - 1.000 - - - - - - - family with sequence similarity 163 member A [Source:HGNC Symbol;Acc:HGNC:28274]
30. ak7b ENSDARG00000017023 25 1 1.000 - - - - - - - - adenylate kinase 7b [Source:ZFIN;Acc:ZDB-GENE-050309-170]
31. CABZ01034707.1 CABZ01034707.1 122 1 - 1.000 - - - - - - -
32. si:dkey-84h14.3 si:dkey-84h14.3 3 1 - 1.000 - - - - - - -
33. eif4e1b ENSDARG00000014565 12 1 - 1.000 - - - - - - - eukaryotic translation initiation factor 4E family member 1B [Source:ZFIN;Acc:ZDB-GENE-980526-127]
34. ptpn18 ENSDARG00000006308 7 1 1.000 - - - - - - - - protein tyrosine phosphatase, non-receptor type 18 [Source:ZFIN;Acc:ZDB-GENE-050320-12]
35. PPP2R2A PPP2R2A 50 1 - 1.000 - - - - - - -
36. col17a1a ENSDARG00000069415 52 1 1.000 - - - - - - - - collagen, type XVII, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090313-107]
37. col17a1b ENSDARG00000079011 143 1 1.000 - - - - - - - - collagen, type XVII, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-7145]
38. themis ENSDARG00000010619 5 1 - 1.000 - - - - - - - thymocyte selection associated [Source:ZFIN;Acc:ZDB-GENE-041008-160]
39. BX539307.1 ENSDARG00000071588 2 1 - 1.000 - - - - - - -
40. si:dkey-17e16.18 47 1 - 1.000 - - - - - - - si:dkey-17e16.18
41. trim35-38 trim35-38 3 1 - 1.000 - - - - - - -
42. SMARCAD1 SMARCAD1 104 1 1.000 - - - - - - - -
43. si:dkey-203c4.2 si:dkey-203c4.2 4 1 1.000 - - - - - - - -
44. CABZ01033130.1 CABZ01033130.1 5 1 1.000 - - - - - - - -
45. cacna1aa ENSDARG00000037905 4 1 - 1.000 - - - - - - - calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, a [Source:ZFIN;Acc:ZDB-GENE-040724-26]
46. skor1a ENSDARG00000069030 19 1 - 1.000 - - - - - - - SKI family transcriptional corepressor 1a [Source:ZFIN;Acc:ZDB-GENE-080722-5]
47. SCN1B SCN1B 191 1 1.000 - - - - - - - -
48. pofut2 ENSDARG00000045175 6 1 1.000 - - - - - - - - protein O-fucosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3595]
49. LRRC52 ENSDARG00000090698 1 1 - 1.000 - - - - - - - leucine rich repeat containing 52 [Source:HGNC Symbol;Acc:HGNC:32156]
50. zgc:162962 ENSDARG00000116765 29 1 1.000 - - - - - - - - zgc:162962 [Source:ZFIN;Acc:ZDB-GENE-070424-76]
51. CU463316.1 CU463316.1 1 1 - 1.000 - - - - - - -
52. zp3b ENSDARG00000039828 15 1 - 1.000 - - - - - - - zona pellucida glycoprotein 3b [Source:ZFIN;Acc:ZDB-GENE-031124-2]
53. slc26a10 ENSDARG00000078800, ENSDARG00000114250 55 1 1.000 - - - - - - - - solute carrier family 26, member 10 [Source:ZFIN;Acc:ZDB-GENE-030131-9845]
54. ANXA9 ANXA9 74 1 - 1.000 - - - - - - -
55. ncf1 ENSDARG00000033735 83 1 - 1.000 - - - - - - - neutrophil cytosolic factor 1 [Source:ZFIN;Acc:ZDB-GENE-031006-6]
56. ociad2 ENSDARG00000052336 102 1 - 1.000 - - - - - - - OCIA domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041014-253]
57. pla1a ENSDARG00000102176, ENSDARG00000109274 29 1 - 1.000 - - - - - - - phospholipase A1 member A [Source:ZFIN;Acc:ZDB-GENE-030131-5949]
58. FNBP1_1 FNBP1_1 3 1 - 1.000 - - - - - - -
59. klc4_1 ENSDARG00000086985 22 1 - 1.000 - - - - - - - kinesin light chain 4 [Source:ZFIN;Acc:ZDB-GENE-050417-350]
60. si:ch73-27e22.5 si:ch73-27e22.5 10 1 1.000 - - - - - - - -
61. si:ch1073-162e11.2 si:ch1073-162e11.2 5 1 1.000 - - - - - - - -
62. si:dkeyp-85d8.6 si:dkeyp-85d8.6 2 1 1.000 - - - - - - - -
63. si:ch211-240l19.6 ENSDARG00000074613, ENSDARG00000115536 7 1 1.000 - - - - - - - - si:ch211-240l19.6 [Source:ZFIN;Acc:ZDB-GENE-041210-328]
64. si:dkey-236a14.12 si:dkey-236a14.12 3 1 - 1.000 - - - - - - -
65. spire2 ENSDARG00000003084 6 1 1.000 - - - - - - - - spire-type actin nucleation factor 2 [Source:ZFIN;Acc:ZDB-GENE-041114-29]
66. zbtb24 ENSDARG00000075533, ENSDARG00000114487 12 1 - 1.000 - - - - - - - zinc finger and BTB domain containing 24 [Source:ZFIN;Acc:ZDB-GENE-081022-123]
67. fgf12a ENSDARG00000027957 143 1 - 1.000 - - - - - - - fibroblast growth factor 12a [Source:ZFIN;Acc:ZDB-GENE-050221-6]
68. OTOG ENSDARG00000068460 60 1 1.000 - - - - - - - - otogelin [Source:ZFIN;Acc:ZDB-GENE-120228-1]
69. opn1mw4 ENSDARG00000000638 2 1 - 1.000 - - - - - - - opsin 1 (cone pigments), medium-wave-sensitive, 4 [Source:ZFIN;Acc:ZDB-GENE-990604-43]
70. ZDHHC12 ZDHHC12 29 1 - 1.000 - - - - - - -
71. valopb ENSDARG00000054181, ENSDARG00000110871 2 1 - 1.000 - - - - - - - vertebrate ancient long opsin b [Source:ZFIN;Acc:ZDB-GENE-040724-41]
72. si:ch73-223d24.4 si:ch73-223d24.4 5 1 1.000 - - - - - - - -
73. snoU13 snoU13 2 1 1.000 - - - - - - - -
74. CABZ01071909.1 ENSDARG00000117524 2 1 - 1.000 - - - - - - -
75. si:ch211-106h4.4 ENSDARG00000093629 9 1 - - - - - 1.000 - - - si:ch211-106h4.4 [Source:ZFIN;Acc:ZDB-GENE-070705-14]
76. fgf21 ENSDARG00000100846 19 1 - 1.000 - - - - - - - fibroblast growth factor 21 [Source:ZFIN;Acc:ZDB-GENE-060623-2]
77. fam167aa ENSDARG00000067665, ENSDARG00000112798 13 1 - 1.000 - - - - - - - family with sequence similarity 167, member Aa [Source:ZFIN;Acc:ZDB-GENE-061013-209]
78. fgf16 ENSDARG00000042233, ENSDARG00000110602 39 1 1.000 - - - - - - - - fibroblast growth factor 16 [Source:ZFIN;Acc:ZDB-GENE-060427-3]
79. iffo1a ENSDARG00000062976 5 1 1.000 - - - - - - - - intermediate filament family orphan 1a [Source:ZFIN;Acc:ZDB-GENE-060503-418]
80. BX005106.1 BX005106.1 22 1 1.000 - - - - - - - -
81. SLC37A4 SLC37A4 10 1 - 1.000 - - - - - - -
82. adarb1a ENSDARG00000041609 476 1 - 1.000 - - - - - - - adenosine deaminase, RNA-specific, B1a [Source:ZFIN;Acc:ZDB-GENE-000627-2]
83. hepacam 73 1 1.000 - - - - - - - - hepatic and glial cell adhesion molecule, transcript variant X2
84. dap1b_1 ENSDARG00000086842, ENSDARG00000109678 830 1 1.000 - - - - - - - - death associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-000511-4]
85. ZBED1_4 ZBED1_4 2 1 - 1.000 - - - - - - -
86. si:dkey-28d5.13 ENSDARG00000077260 3 1 - 1.000 - - - - - - - si:dkey-28d5.13 [Source:ZFIN;Acc:ZDB-GENE-060503-636]
87. nceh1b nceh1b 22 1 - 1.000 - - - - - - -
88. si:busm1-163l24.3 31 1 1.000 - - - - - - - - si:busm1-163l24.3
89. CR382327.4 CR382327.4 143 1 - 1.000 - - - - - - -
90. si:dkey-270m17.3 si:dkey-270m17.3 1 1 - 1.000 - - - - - - -
91. abcg4a ENSDARG00000061047 56 1 1.000 - - - - - - - - ATP-binding cassette, sub-family G (WHITE), member 4a [Source:ZFIN;Acc:ZDB-GENE-050517-39]
92. snai3 ENSDARG00000031243 31 1 - 1.000 - - - - - - - snail family zinc finger 3 [Source:ZFIN;Acc:ZDB-GENE-061013-757]
93. CR848836.4 CR848836.4 4 1 - 1.000 - - - - - - -
94. si:dkey-206f10.5 si:dkey-206f10.5 1 1 1.000 - - - - - - - -
95. CABZ01112249.1 CABZ01112249.1 1 1 - - - - - 1.000 - - -
96. sostdc1a ENSDARG00000068892 127 1 1.000 - - - - - - - - sclerostin domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-050417-64]
97. CU463790.1 CU463790.1 60 1 1.000 - - - - - - - -
98. si:dkey-4c23.3 ENSDARG00000092028, ENSDARG00000110418 4 1 - 1.000 - - - - - - - si:dkey-4c23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-668]
99. si:dkey-179a6.2 si:dkey-179a6.2 1 1 1.000 - - - - - - - -
100. Metazoa_SRP_25 Metazoa_SRP_25 13 1 - 1.000 - - - - - - -

There are 750 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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