Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-67e16.2

Gene Name Gene ID Reads Annotation
si:ch211-67e16.2 41 si:ch211-67e16.2, transcript variant X2










Genes with expression patterns similar to si:ch211-67e16.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-67e16.2 41 6 - - 1.000 1.000 - 1.000 1.000 1.000 1.000 si:ch211-67e16.2, transcript variant X2
2. CR376848.1 ENSDARG00000115549 149 1.843 - - - - - 0.875 - 0.968 - neutral cholesterol ester hydrolase 1-like [Source:NCBI gene;Acc:797436]
3. CT583728.14 ENSDARG00000112295 911 1.741 - - - - - - 0.802 0.939 -
4. CR936337.1 CR936337.1 38 1.739 - - - - - 0.740 - 0.999 -
5. si:dkey-162h11.2 si:dkey-162h11.2 257 1.735 - - - - - - 0.952 0.783 -
6. CABZ01039859.1 ENSDARG00000076361 540 1.726 - - - - - - 0.790 0.936 - beta-1,4 N-acetylgalactosaminyltransferase 2-like [Source:NCBI gene;Acc:100333855]
7. ttpal ENSDARG00000070644, ENSDARG00000112925 471 1.724 - - - - - - 0.848 0.876 - tocopherol (alpha) transfer protein-like [Source:ZFIN;Acc:ZDB-GENE-030131-296]
8. ripk4 ENSDARG00000043211 775 1.703 - - - - - - 0.740 0.963 - receptor-interacting serine-threonine kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2042]
9. dis3l ENSDARG00000053200, ENSDARG00000112358 267 1.681 - - - - - 0.772 0.909 - - DIS3 like exosome 3'-5' exoribonuclease [Source:ZFIN;Acc:ZDB-GENE-070209-95]
10. fance ENSDARG00000068870 155 1.678 - - - - - - 0.713 0.965 - FA complementation group E [Source:ZFIN;Acc:ZDB-GENE-060510-5]
11. SPAG17 SPAG17 31 1.627 - - - 0.708 - 0.919 - - -
12. DCUN1D3 ENSDARG00000011493 319 1.623 - - - - - - 0.898 0.725 - defective in cullin neddylation 1 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070928-2]
13. fam151b ENSDARG00000020024 255 1.599 - - - - - 0.781 0.818 - - family with sequence similarity 151, member B [Source:ZFIN;Acc:ZDB-GENE-040801-38]
14. pif1 ENSDARG00000020289 216 1.555 - - - - - 0.728 0.827 - - PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-4928]
15. CR383676.3 CR383676.3 2650 1.549 - - - - - - 0.795 0.754 -
16. chfr ENSDARG00000075347 664 1.47 - - - - - - 0.765 0.705 - checkpoint with forkhead and ring finger domains, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-030131-3522]
17. si:dkey-153k10.7 3 1 - - - - - 1.000 - - - si:dkey-153k10.7, transcript variant X1
18. BX682234.2 BX682234.2 28 1 - - - - - - - 1.000 -
19. FCHSD2 FCHSD2 35 1 - - - - - - - 1.000 -
20. htra3a ENSDARG00000052895 28 1 - - - - - - - 1.000 - HtrA serine peptidase 3a [Source:ZFIN;Acc:ZDB-GENE-040801-245]
21. si:ch73-67c22.3 si:ch73-67c22.3 30 1 - - - - - - - 1.000 -
22. JAKMIP3 ENSDARG00000100708 56 1 - - - - - - - 1.000 - Janus kinase and microtubule interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-100914-6]
23. si:ch211-106h4.9 ENSDARG00000075706 36 0.999 - - - - - - - 0.999 - si:ch211-106h4.9 [Source:ZFIN;Acc:ZDB-GENE-070705-17]
24. CR848836.5 CR848836.5 42 0.999 - - - - - - - 0.999 -
25. gcdhl gcdhl 38 0.999 - - - - - - - 0.999 -
26. sv2ba ENSDARG00000057427 33 0.999 - - - - - - - 0.999 - synaptic vesicle glycoprotein 2Ba [Source:ZFIN;Acc:ZDB-GENE-070209-134]
27. si:dkey-29n10.3 si:dkey-29n10.3 66 0.998 - - - - - - - 0.998 -
28. chrna2b ENSDARG00000057025 217 0.998 - - - - - - - 0.998 - cholinergic receptor, nicotinic, alpha 2b (neuronal) [Source:ZFIN;Acc:ZDB-GENE-041001-99]
29. si:ch211-254c8.2 233 0.998 - - - - - - - 0.998 - si:ch211-254c8.2, transcript variant X4
30. CABZ01114089.1 CABZ01114089.1 127 0.997 - - - - - - - 0.997 -
31. si:dkey-10g2.5 si:dkey-10g2.5 72 0.997 - - - - - - - 0.997 -
32. cx28.8 ENSDARG00000071042 62 0.997 - - - - - - - 0.997 - connexin 28.8 [Source:ZFIN;Acc:ZDB-GENE-050616-1]
33. CABZ01087562.1 CABZ01087562.1 80 0.997 - - - - - - - 0.997 -
34. usp43a ENSDARG00000103494, ENSDARG00000111546, ENSDARG00000112146 211 0.997 - - - - - - - 0.997 - ubiquitin specific peptidase 43a [Source:ZFIN;Acc:ZDB-GENE-100211-1]
35. styx ENSDARG00000057699 48 0.996 - - - - - - - 0.996 - serine/threonine/tyrosine interacting protein [Source:ZFIN;Acc:ZDB-GENE-050522-45]
36. si:busm1-105l16.2 ENSDARG00000070858, ENSDARG00000114184 199 0.996 - - - - - - - 0.996 - si:busm1-105l16.2 [Source:ZFIN;Acc:ZDB-GENE-030616-108]
37. lrrc4ba ENSDARG00000004597, ENSDARG00000112893 72 0.996 - - - - - - - 0.996 - leucine rich repeat containing 4Ba [Source:ZFIN;Acc:ZDB-GENE-080327-25]
38. dnah9l ENSDARG00000062630 268 0.996 - - - - - - - 0.996 - dynein, axonemal, heavy polypeptide 9 like [Source:ZFIN;Acc:ZDB-GENE-050506-1]
39. aars2 ENSDARG00000107385 190 0.994 - - - - - - - 0.994 - alanyl-tRNA synthetase 2, mitochondrial (putative) [Source:ZFIN;Acc:ZDB-GENE-041008-213]
40. MYLK4 MYLK4 180 0.993 - - - - - - - 0.993 -
41. mknk1 ENSDARG00000018411 749 0.993 - - - - - - - 0.993 - MAP kinase interacting serine/threonine kinase 1 [Source:ZFIN;Acc:ZDB-GENE-080220-11]
42. trabd ENSDARG00000010445 195 0.993 - - - - - - - 0.993 - TraB domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-1301]
43. mlh1 ENSDARG00000025948 130 0.993 - - - - - - - 0.993 - mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-040426-1600]
44. cacnb2a ENSDARG00000099045 374 0.993 - - - - - - - 0.993 - calcium channel, voltage-dependent, beta 2a [Source:ZFIN;Acc:ZDB-GENE-080808-7]
45. phf19 ENSDARG00000078050 117 0.991 - - - - - - - 0.991 - PHD finger protein 19 [Source:ZFIN;Acc:ZDB-GENE-081105-128]
46. tmem106a ENSDARG00000045075, ENSDARG00000116020 727 0.991 - - - - - - - 0.991 - transmembrane protein 106A [Source:ZFIN;Acc:ZDB-GENE-030131-5129]
47. CU234171.2 CU234171.2 86 0.991 - - - - - - - 0.991 -
48. rad23aa ENSDARG00000020001 374 0.99 - - - - - - - 0.990 - RAD23 homolog A, nucleotide excision repair protein a [Source:ZFIN;Acc:ZDB-GENE-040808-59]
49. rab20 ENSDARG00000005049 346 0.99 - - - - - - - 0.990 - RAB20, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030131-9143]
50. si:dkey-11f4.16 ENSDARG00000099799 121 0.99 - - - - - - - 0.990 - si:dkey-11f4.16 [Source:ZFIN;Acc:ZDB-GENE-070912-357]
51. si:dkey-153k10.9 ENSDARG00000004386, ENSDARG00000109564, ENSDARG00000111507 319 0.989 - - - - - - - 0.989 - si:dkey-153k10.9 [Source:ZFIN;Acc:ZDB-GENE-030131-3893]
52. zbtb46 ENSDARG00000078191, ENSDARG00000113888 231 0.989 - - - - - - - 0.989 - zinc finger and BTB domain containing 46 [Source:ZFIN;Acc:ZDB-GENE-090313-352]
53. fbxo7 ENSDARG00000099833 304 0.988 - - - - - - - 0.988 - F-box protein 7 [Source:ZFIN;Acc:ZDB-GENE-050913-68]
54. rbm27 ENSDARG00000060521 185 0.988 - - - - - - - 0.988 - RNA binding motif protein 27 [Source:ZFIN;Acc:ZDB-GENE-110411-31]
55. slc2a8 ENSDARG00000104278 764 0.988 - - - - - - - 0.988 - solute carrier family 2 (facilitated glucose transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-030829-25]
56. SNAPC2 ENSDARG00000036473 158 0.988 - - - - - - - 0.988 - small nuclear RNA activating complex, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-120328-2]
57. STIM2 STIM2 644 0.985 - - - - - - - 0.985 -
58. fam63b 484 0.984 - - - - - - - 0.984 - family with sequence similarity 63, member B
59. si:dkey-266m15.6 ENSDARG00000078508 490 0.983 - - - - - - - 0.983 - si:dkey-266m15.6 [Source:ZFIN;Acc:ZDB-GENE-070705-443]
60. SH2B2 ENSDARG00000090421 245 0.983 - - - - - - - 0.983 - SH2B adaptor protein 2 [Source:HGNC Symbol;Acc:HGNC:17381]
61. pggt1b ENSDARG00000103464 441 0.983 - - - - - - - 0.983 - protein geranylgeranyltransferase type I, beta subunit [Source:ZFIN;Acc:ZDB-GENE-050913-85]
62. si:ch211-269i23.2 432 0.981 - - - - - - - 0.981 - si:ch211-269i23.2, transcript variant X3
63. snx8a ENSDARG00000074842 411 0.98 - - - - - - - 0.980 - sorting nexin 8a [Source:ZFIN;Acc:ZDB-GENE-031202-1]
64. zgc:66474 ENSDARG00000026453 784 0.98 - - - - - - - 0.980 - zgc:66474 [Source:ZFIN;Acc:ZDB-GENE-030131-5711]
65. si:dkey-57k17.1 ENSDARG00000104697 442 0.98 - - - - - - - 0.980 - si:dkey-57k17.1 [Source:ZFIN;Acc:ZDB-GENE-110913-105]
66. slc27a1b ENSDARG00000038352, ENSDARG00000104949 298 0.98 - - - - - - - 0.980 - solute carrier family 27 (fatty acid transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-061013-672]
67. zgc:101640 733 0.98 - - - - - - - 0.980 - zgc:101640, transcript variant X2
68. rint1 ENSDARG00000005547 898 0.979 - - - - - - - 0.979 - RAD50 interactor 1 [Source:ZFIN;Acc:ZDB-GENE-041210-174]
69. clip2 ENSDARG00000059596 529 0.979 - - - - - - - 0.979 - CAP-GLY domain containing linker protein 2 [Source:ZFIN;Acc:ZDB-GENE-100727-3]
70. phf16 phf16 1116 0.978 - - - - - - - 0.978 -
71. trpm1b ENSDARG00000103476 369 0.977 - - - - - - - 0.977 - transient receptor potential cation channel, subfamily M, member 1b [Source:ZFIN;Acc:ZDB-GENE-070424-31]
72. zcchc9 ENSDARG00000007531 1748 0.977 - - - - - - - 0.977 - zinc finger, CCHC domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-031030-9]
73. zgc:174895 ENSDARG00000079416, ENSDARG00000113559 451 0.976 - - - - - - - 0.976 - zgc:174895 [Source:ZFIN;Acc:ZDB-GENE-070928-41]
74. fhl1b ENSDARG00000056653 577 0.976 - - - - - - - 0.976 - four and a half LIM domains 1b [Source:ZFIN;Acc:ZDB-GENE-031219-1]
75. hey2 ENSDARG00000013441 540 0.975 - - - - - - - 0.975 - hes-related family bHLH transcription factor with YRPW motif 2 [Source:ZFIN;Acc:ZDB-GENE-000526-1]
76. TMEM116 TMEM116 96 0.975 - - - - - - - 0.975 -
77. CACHD1 ENSDARG00000061590 1287 0.974 - - - - - - - 0.974 - cache domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100819-3]
78. elp3 ENSDARG00000042005 936 0.974 - - - - - - - 0.974 - elongator acetyltransferase complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050327-35]
79. mgat2 ENSDARG00000052408 264 0.973 - - - - - - - 0.973 - mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-070410-54]
80. CU693494.3 CU693494.3 169 0.972 - - - - - - - 0.972 -
81. MEGF9 MEGF9 482 0.972 - - - - - - - 0.972 -
82. CABZ01086825.1 CABZ01086825.1 573 0.972 - - - - - - - 0.972 -
83. TRHDE_1 TRHDE_1 102 0.972 - - - - - - - 0.972 -
84. eng1a eng1a 484 0.971 - - - - - - - 0.971 -
85. stmn4 ENSDARG00000030106 518 0.971 - - - - - - - 0.971 - stathmin-like 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2732]
86. igdcc4 ENSDARG00000076919 1303 0.97 - - - - - - - 0.970 - immunoglobulin superfamily, DCC subclass, member 4 [Source:ZFIN;Acc:ZDB-GENE-080327-32]
87. klhl18 ENSDARG00000004306 448 0.969 - - - - - - - 0.969 - kelch-like family member 18 [Source:ZFIN;Acc:ZDB-GENE-030131-5785]
88. noc4l ENSDARG00000045565 1337 0.966 - - - - - - - 0.966 - nucleolar complex associated 4 homolog [Source:ZFIN;Acc:ZDB-GENE-050522-98]
89. LPHN3 LPHN3 195 0.965 - - - - - - - 0.965 -
90. clasp1a ENSDARG00000010280 1158 0.965 - - - - - - - 0.965 - cytoplasmic linker associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-081104-520]
91. scaf4b ENSDARG00000018854 734 0.965 - - - - - - - 0.965 - SR-related CTD-associated factor 4b [Source:ZFIN;Acc:ZDB-GENE-050506-42]
92. zgc:162780 ENSDARG00000069548 340 0.964 - - - - - - - 0.964 - zgc:162780 [Source:ZFIN;Acc:ZDB-GENE-070410-92]
93. SLC35A2 ENSDARG00000058990 289 0.964 - - - - - - - 0.964 - solute carrier family 35 (UDP-galactose transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030616-62]
94. nek2 ENSDARG00000005619 273 0.963 - - - - - - - 0.963 - NIMA-related kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-752]
95. gulp1b ENSDARG00000057833 382 0.963 - - - - - - - 0.963 - GULP, engulfment adaptor PTB domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-120228-2]
96. si:dkey-23c22.4 si:dkey-23c22.4 556 0.962 - - - - - - - 0.962 -
97. znf277 ENSDARG00000025346, ENSDARG00000113592 288 0.961 - - - - - - - 0.961 - zinc finger protein 277 [Source:ZFIN;Acc:ZDB-GENE-040426-1633]
98. zgc:194470 zgc:194470 210 0.961 - - - - - - - 0.961 -
99. spata2l ENSDARG00000068814 152 0.96 - - - - - - - 0.960 - spermatogenesis associated 2-like [Source:ZFIN;Acc:ZDB-GENE-070705-402]
100. ST7 ENSDARG00000039960, ENSDARG00000112691 2020 0.96 - - - - - - - 0.960 - suppression of tumorigenicity 7 [Source:ZFIN;Acc:ZDB-GENE-060421-2807]

There are 710 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA