Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-285c6.2

Gene Name Gene ID Reads Annotation
si:ch211-285c6.2 ENSDARG00000079234 1 si:ch211-285c6.2 [Source:ZFIN;Acc:ZDB-GENE-040724-168]










Genes with expression patterns similar to si:ch211-285c6.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-285c6.2 ENSDARG00000079234 1 3 - - 1.000 - - 1.000 - 1.000 - si:ch211-285c6.2 [Source:ZFIN;Acc:ZDB-GENE-040724-168]
2. si:rp71-7l19.7 si:rp71-7l19.7 1 2 - - 1.000 - - 1.000 - - -
3. hoxc9a ENSDARG00000092809 18 2 - - - - - 1.000 - 1.000 - homeobox C9a [Source:ZFIN;Acc:ZDB-GENE-000328-5]
4. si:dkey-191j3.2 ENSDARG00000101997 1 2 - - 1.000 - - - - 1.000 - si:dkey-191j3.2 [Source:ZFIN;Acc:ZDB-GENE-081103-55]
5. PSKH2 PSKH2 1 2 - - 1.000 - - - - 1.000 -
6. mir124-1 10 2 - - 1.000 - - 1.000 - - - microRNA 124-1
7. 5S_rRNA_19 5S_rRNA_19 1 2 - - 1.000 - - 1.000 - - -
8. abcd1 ENSDARG00000074876 6 1.81 - - - - - 1.000 - 0.810 - ATP-binding cassette, sub-family D (ALD), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-27]
9. MAP3K13 ENSDARG00000009493 8 1.805 - - 0.855 - - 0.950 - - - mitogen-activated protein kinase kinase kinase 13 [Source:HGNC Symbol;Acc:HGNC:6852]
10. MFAP4_4 MFAP4_4 9 1.702 - - 0.702 - - 1.000 - - -
11. sox11b ENSDARG00000095743 8 1.5 - - 0.769 - - - - 0.731 - SRY (sex determining region Y)-box 11b [Source:ZFIN;Acc:ZDB-GENE-980526-466]
12. ela3l ENSDARG00000007276 11 1 - - - - - 1.000 - - - elastase 3 like [Source:ZFIN;Acc:ZDB-GENE-060710-2]
13. si:dkey-26i24.1 ENSDARG00000102673 4 1 - - 1.000 - - - - - - si:dkey-26i24.1 [Source:ZFIN;Acc:ZDB-GENE-110913-88]
14. si:dkey-165g20.2 si:dkey-165g20.2 3 1 - - 1.000 - - - - - -
15. p4ha1a_1 ENSDARG00000033537, ENSDARG00000114754 36 1 - - - - - 1.000 - - - prolyl 4-hydroxylase, alpha polypeptide I a [Source:ZFIN;Acc:ZDB-GENE-040724-91]
16. DKK3 DKK3 12 1 - - - - - 1.000 - - -
17. rgs9bp ENSDARG00000009466 41 1 - - - - - 1.000 - - - regulator of G protein signaling 9 binding protein [Source:ZFIN;Acc:ZDB-GENE-030728-1]
18. fn3krp ENSDARG00000098208 4 1 - - 1.000 - - - - - - fructosamine 3 kinase related protein [Source:ZFIN;Acc:ZDB-GENE-041010-192]
19. si:dkey-266f7.10 ENSDARG00000086613 7 1 - - - - - 1.000 - - - si:dkey-266f7.10 [Source:ZFIN;Acc:ZDB-GENE-120215-242]
20. gata2b ENSDARG00000009094 16 1 - - 1.000 - - - - - - GATA binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-040718-440]
21. snx21 ENSDARG00000062770, ENSDARG00000111065 9 1 - - - - - 1.000 - - - sorting nexin family member 21 [Source:ZFIN;Acc:ZDB-GENE-061013-557]
22. efemp2b_1 ENSDARG00000020811 77 1 - - - - - 1.000 - - - EGF containing fibulin extracellular matrix protein 2b [Source:ZFIN;Acc:ZDB-GENE-030219-125]
23. si:dkey-117i10.1 ENSDARG00000062537 3 1 - - - - - - - 1.000 - si:dkey-117i10.1 [Source:ZFIN;Acc:ZDB-GENE-091204-371]
24. hbaa2 ENSDARG00000069735 10 1 - - 1.000 - - - - - - hemoglobin, alpha adult 2 [Source:ZFIN;Acc:ZDB-GENE-081104-38]
25. si:dkey-208k4.1 si:dkey-208k4.1 15 1 - - - - - 1.000 - - -
26. si:dkey-211e20.3 si:dkey-211e20.3 1 1 - - 1.000 - - - - - -
27. BX548078.2 BX548078.2 6 1 - - - - - - - 1.000 -
28. CU468041.1 ENSDARG00000092125 1 1 - - 1.000 - - - - - -
29. si:dkey-148a12.2 si:dkey-148a12.2 1 1 - - 1.000 - - - - - -
30. nkd3_1 ENSDARG00000013174, ENSDARG00000069984, ENSDARG00000086218, ENSDARG00000096278 1 1 - - 1.000 - - - - - - naked cuticle homolog 3 [Source:ZFIN;Acc:ZDB-GENE-060503-63]
31. CABZ01087111.1 CABZ01087111.1 42 1 - - 1.000 - - - - - -
32. hsf5 ENSDARG00000104686 9 1 - - 1.000 - - - - - - heat shock transcription factor family member 5 [Source:ZFIN;Acc:ZDB-GENE-070410-42]
33. KCNB1 ENSDARG00000060095, ENSDARG00000112775 5 1 - - - - - - - 1.000 - potassium voltage-gated channel, Shab-related subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-090831-3]
34. spo11 ENSDARG00000013837 7 1 - - - - - 1.000 - - - SPO11 meiotic protein covalently bound to DSB [Source:ZFIN;Acc:ZDB-GENE-040426-1900]
35. prf1.7 1 1 - - - - - 1.000 - - - perforin 1.7
36. si:dkey-16j24.1 2 1 - - 1.000 - - - - - - si:dkey-16j24.1, transcript variant X1
37. CU138503.2 CU138503.2 0 1 - - 1.000 - - - - - -
38. zgc:174311 zgc:174311 3 1 - - 1.000 - - - - - -
39. si:dkey-147f3.4 ENSDARG00000071029, ENSDARG00000092077 36 1 - - - - - 1.000 - - - si:dkey-147f3.4 [Source:ZFIN;Acc:ZDB-GENE-061009-29]
40. CABZ01038708.1 CABZ01038708.1 28 1 - - - - - - - 1.000 -
41. kalrna ENSDARG00000104119 8 1 - - - - - - - 1.000 - kalirin RhoGEF kinase a [Source:ZFIN;Acc:ZDB-GENE-100921-4]
42. si:dkey-57a22.12 si:dkey-57a22.12 23 1 - - - - - 1.000 - - -
43. si:dkey-30k22.8 si:dkey-30k22.8 7 1 - - - - - 1.000 - - -
44. SNORA53 SNORA53 10 1 - - 1.000 - - - - - -
45. CABZ01079302.1 ENSDARG00000103230 2 1 - - 1.000 - - - - - -
46. zgc:114037_5 6 1 - - 1.000 - - - - - - zgc:114037
47. v2rh9 ENSDARG00000056009 0 1 - - - - - 1.000 - - - vomeronasal 2 receptor, h9 [Source:ZFIN;Acc:ZDB-GENE-050419-176]
48. zgc:114046 ENSDARG00000091728 68 1 - - - - - 1.000 - - - zgc:114046 [Source:ZFIN;Acc:ZDB-GENE-050320-24]
49. kcnq3 ENSDARG00000060085 0 1 - - 1.000 - - - - - - potassium voltage-gated channel, KQT-like subfamily, member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-301]
50. CABZ01060030.1 ENSDARG00000106579 55 1 - - - - - 1.000 - - - rho-related BTB domain-containing protein 2-like [Source:NCBI gene;Acc:100331257]
51. MRC2 ENSDARG00000078135, ENSDARG00000111490 10 1 - - - - - 1.000 - - - mannose receptor, C type 2 [Source:ZFIN;Acc:ZDB-GENE-090915-5]
52. KCNJ3_1 KCNJ3_1 30 1 - - 1.000 - - - - - -
53. si:ch73-36i7.2 si:ch73-36i7.2 5 1 - - 1.000 - - - - - -
54. CR855307.2 CR855307.2 1 1 - - 1.000 - - - - - -
55. nr5a1b ENSDARG00000023362 54 1 - - - - - 1.000 - - - nuclear receptor subfamily 5, group A, member 1b [Source:ZFIN;Acc:ZDB-GENE-040702-6]
56. hip1r hip1r 10 1 - - - - - 1.000 - - -
57. rgs8 ENSDARG00000070037, ENSDARG00000111478 37 1 - - - - - 1.000 - - - regulator of G protein signaling 8 [Source:ZFIN;Acc:ZDB-GENE-040718-264]
58. CR356247.1 CR356247.1 2 1 - - 1.000 - - - - - -
59. si:dkey-56m15.4 si:dkey-56m15.4 39 1 - - - - - - - 1.000 -
60. si:ch211-274f20.4 si:ch211-274f20.4 0 1 - - 1.000 - - - - - -
61. si:ch211-121j5.2 si:ch211-121j5.2 86 1 - - - - - 1.000 - - -
62. ralgps1 ENSDARG00000068370 39 1 - - 1.000 - - - - - - Ral GEF with PH domain and SH3 binding motif 1 [Source:ZFIN;Acc:ZDB-GENE-070720-16]
63. akt3a_1 ENSDARG00000104810 12 1 - - - - - 1.000 - - - v-akt murine thymoma viral oncogene homolog 3a [Source:ZFIN;Acc:ZDB-GENE-050419-180]
64. si:ch211-132b12.1 ENSDARG00000061480 3 1 - - - - - - - 1.000 - si:ch211-132b12.1 [Source:ZFIN;Acc:ZDB-GENE-050420-315]
65. zgc:162322 zgc:162322 1 1 - - 1.000 - - - - - -
66. si:dkey-47k20.3 ENSDARG00000029635 0 1 - - - - - 1.000 - - - si:dkey-47k20.3 [Source:ZFIN;Acc:ZDB-GENE-060503-830]
67. si:ch211-196h16.4 ENSDARG00000094782 0 1 - - 1.000 - - - - - - si:ch211-196h16.4 [Source:ZFIN;Acc:ZDB-GENE-081029-1]
68. ppp1r9a ENSDARG00000061304 12 1 - - - - - 1.000 - - - protein phosphatase 1, regulatory subunit 9A [Source:ZFIN;Acc:ZDB-GENE-060503-660]
69. si:ch73-167f18.4 si:ch73-167f18.4 9 1 - - - - - 1.000 - - -
70. pcdh2g12 5 1 - - 1.000 - - - - - - protocadherin 2 gamma 12
71. si:ch211-215m21.27 si:ch211-215m21.27 3 1 - - 1.000 - - - - - -
72. CABZ01012080.1 CABZ01012080.1 10 1 - - 1.000 - - - - - -
73. CR626884.3 ENSDARG00000104648 1 1 - - 1.000 - - - - - -
74. tatdn3 ENSDARG00000054076 130 1 - - - - - 1.000 - - - TatD DNase domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050522-192]
75. si:dkey-25c4.1 si:dkey-25c4.1 1 1 - - - - - 1.000 - - -
76. CR536621.1 CR536621.1 2 1 - - 1.000 - - - - - -
77. zgc:173702 ENSDARG00000110229 411 1 - - - - - 1.000 - - - zgc:173702 [Source:ZFIN;Acc:ZDB-GENE-080208-3]
78. mxd ENSDARG00000023369 8 1 - - 1.000 - - - - - - myxovirus (influenza virus) resistance D [Source:ZFIN;Acc:ZDB-GENE-030721-8]
79. rab11bb_1 ENSDARG00000090086 7 1 - - - - - 1.000 - - - RAB11B, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040718-293]
80. CU861891.1 ENSDARG00000097162 0 1 - - - - - 1.000 - - -
81. si:rp71-1h20.2 si:rp71-1h20.2 0 1 - - 1.000 - - - - - -
82. mink1 ENSDARG00000035360, ENSDARG00000112785 13 1 - - - - - - - 1.000 - misshapen-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-060526-45]
83. si:dkey-103i16.2_1 si:dkey-103i16.2_1 105 1 - - - - - 1.000 - - -
84. lct ENSDARG00000060671 4 1 - - - - - 1.000 - - - lactase [Source:ZFIN;Acc:ZDB-GENE-081104-434]
85. zgc:153642 ENSDARG00000052900 0 1 - - - - - 1.000 - - - zgc:153642 [Source:ZFIN;Acc:ZDB-GENE-061013-527]
86. setd6 ENSDARG00000043986, ENSDARG00000113991 194 1 - - - - - 1.000 - - - SET domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-1067]
87. zgc:174642_2 zgc:174642_2 1 1 - - 1.000 - - - - - -
88. mfsd4a mfsd4a 179 1 - - - - - 1.000 - - -
89. ssh1a ENSDARG00000056780 3 1 - - - - - - - 1.000 - slingshot protein phosphatase 1a [Source:ZFIN;Acc:ZDB-GENE-040724-201]
90. trhra ENSDARG00000076546 3 1 - - - - - 1.000 - - - thyrotropin-releasing hormone receptor a [Source:ZFIN;Acc:ZDB-GENE-100922-18]
91. TMEM241 ENSDARG00000090685 11 1 - - - - - 1.000 - - - transmembrane protein 241 [Source:ZFIN;Acc:ZDB-GENE-131127-368]
92. EXT1 EXT1 3 1 - - - - - 1.000 - - -
93. STOX2 STOX2 0 1 - - 1.000 - - - - - -
94. CU695076.1 CU695076.1 7 1 - - 1.000 - - - - - -
95. CABZ01044611.1 CABZ01044611.1 8 1 - - - - - 1.000 - - -
96. si:ch73-116o1.3 si:ch73-116o1.3 1 1 - - - - - 1.000 - - -
97. U4_1 U4_1 2 1 - - 1.000 - - - - - -
98. ERP27 2 1 - - - - - 1.000 - - - endoplasmic reticulum protein 27
99. ttc6 ENSDARG00000104125 7 1 - - 1.000 - - - - - - tetratricopeptide repeat domain 6 [Source:ZFIN;Acc:ZDB-GENE-090429-2]
100. si:ch211-57m13.10 ENSDARG00000095902 1 1 - - - - - - - 1.000 - si:ch211-57m13.10 [Source:ZFIN;Acc:ZDB-GENE-110411-264]

There are 443 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA