Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-281k12.1

Gene Name Gene ID Reads Annotation
si:ch211-281k12.1 si:ch211-281k12.1 1










Genes with expression patterns similar to si:ch211-281k12.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-281k12.1 si:ch211-281k12.1 1 2 - - 1.000 - 1.000 - - - -
2. si:dkeyp-33e11.1 6 1 - - - - 1.000 - - - - si:dkeyp-33e11.1, transcript variant X3
3. BX005356.2 BX005356.2 2 1 - - - - 1.000 - - - -
4. fancm ENSDARG00000103933 1 1 - - - - 1.000 - - - - FA complementation group M [Source:ZFIN;Acc:ZDB-GENE-090929-1]
5. AFAP1L1 AFAP1L1 1 1 - - - - 1.000 - - - -
6. crhb ENSDARG00000027657 9 1 - - - - 1.000 - - - - corticotropin releasing hormone b [Source:ZFIN;Acc:ZDB-GENE-041114-75]
7. si:ch211-153j24.3 ENSDARG00000068428 0 1 - - - - 1.000 - - - - si:ch211-153j24.3 [Source:ZFIN;Acc:ZDB-GENE-041014-38]
8. lgsn ENSDARG00000007715 8 1 - - - - 1.000 - - - - lengsin, lens protein with glutamine synthetase domain [Source:ZFIN;Acc:ZDB-GENE-060312-26]
9. si:ch211-238g23.1 ENSDARG00000055746 23 1 - - - - 1.000 - - - - si:ch211-238g23.1 [Source:ZFIN;Acc:ZDB-GENE-050420-173]
10. MYO7B MYO7B 8 1 - - - - 1.000 - - - -
11. rhpn1 ENSDARG00000052454 3 1 - - - - 1.000 - - - - rhophilin, Rho GTPase binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-081031-79]
12. ptger2a ENSDARG00000011434 6 1 - - - - 1.000 - - - - prostaglandin E receptor 2a (subtype EP2) [Source:ZFIN;Acc:ZDB-GENE-040426-1321]
13. si:dkey-65l23.1 2 1 - - - - 1.000 - - - - si:dkey-65l23.1
14. men1_1 ENSDARG00000089456 3 1 - - - - 1.000 - - - - multiple endocrine neoplasia I [Source:ZFIN;Acc:ZDB-GENE-991110-12]
15. si:dkeyp-100a5.2 si:dkeyp-100a5.2 1 1 - - 1.000 - - - - - -
16. si:dkey-14d8.19 si:dkey-14d8.19 12 1 - - - - 1.000 - - - -
17. si:ch211-207e19.15 ENSDARG00000113022 5 1 - - - - 1.000 - - - - si:ch211-207e19.15 [Source:ZFIN;Acc:ZDB-GENE-110914-27]
18. CDHR5 CDHR5 2 1 - - - - 1.000 - - - -
19. CABZ01080434.1 ENSDARG00000102438 4 1 - - - - 1.000 - - - -
20. CABZ01072037.1 CABZ01072037.1 2 1 - - 1.000 - - - - - -
21. btf3l4 ENSDARG00000089681 2 1 - - - - 1.000 - - - - basic transcription factor 3-like 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1650]
22. spata7 ENSDARG00000075898 16 1 - - - - 1.000 - - - - spermatogenesis associated 7 [Source:ZFIN;Acc:ZDB-GENE-050419-61]
23. cdx1a ENSDARG00000114554 28 1 - - 1.000 - - - - - - caudal type homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-050510-1]
24. myo7bb ENSDARG00000077201 7 1 - - - - 1.000 - - - - myosin VIIBb [Source:ZFIN;Acc:ZDB-GENE-070912-482]
25. ENSDARG00000091313 ENSDARG00000091313 6 1 - - 1.000 - - - - - -
26. si:rp71-18l21.1 si:rp71-18l21.1 2 1 - - - - 1.000 - - - -
27. TSPEAR TSPEAR 9 1 - - - - 1.000 - - - -
28. WASF1 ENSDARG00000060349 1 1 - - - - 1.000 - - - - WAS protein family, member 1 [Source:ZFIN;Acc:ZDB-GENE-070705-555]
29. cd226 ENSDARG00000045391 2 1 - - - - 1.000 - - - - CD226 molecule [Source:ZFIN;Acc:ZDB-GENE-070112-1322]
30. si:dkey-6a5.3 ENSDARG00000094001 0 1 - - - - 1.000 - - - - si:dkey-6a5.3 [Source:ZFIN;Acc:ZDB-GENE-041210-128]
31. PTCHD2 PTCHD2 2 1 - - - - 1.000 - - - -
32. 5S_rRNA_30 5S_rRNA_30 0 1 - - - - 1.000 - - - -
33. si:dkey-47k20.6 si:dkey-47k20.6 2 1 - - 1.000 - - - - - -
34. zgc:162235 zgc:162235 9 1 - - - - 1.000 - - - -
35. CT737190.3 CT737190.3 0 1 - - - - 1.000 - - - -
36. si:dkey-19h16.7 si:dkey-19h16.7 0 1 - - - - 1.000 - - - -
37. fabp10a ENSDARG00000038439 4 1 - - - - 1.000 - - - - fatty acid binding protein 10a, liver basic [Source:ZFIN;Acc:ZDB-GENE-020318-1]
38. ssh1a ENSDARG00000056780 3 1 - - 1.000 - - - - - - slingshot protein phosphatase 1a [Source:ZFIN;Acc:ZDB-GENE-040724-201]
39. SGPP2 ENSDARG00000079608 1 1 - - - - 1.000 - - - - sphingosine-1-phosphate phosphatase 2 [Source:HGNC Symbol;Acc:HGNC:19953]
40. BAI2 BAI2 0 1 - - - - 1.000 - - - -
41. si:dkey-52j6.1 si:dkey-52j6.1 3 1 - - - - 1.000 - - - -
42. PLB1 PLB1 20 1 - - 1.000 - - - - - -
43. BX088718.1 ENSDARG00000101847 3 1 - - - - 1.000 - - - -
44. CABZ01073085.1 CABZ01073085.1 1 1 - - - - 1.000 - - - -
45. slc26a6l ENSDARG00000054127 8 1 - - 1.000 - - - - - - solute carrier family 26, member 6, like [Source:ZFIN;Acc:ZDB-GENE-080220-10]
46. si:ch211-268b13.6 si:ch211-268b13.6 0 1 - - - - 1.000 - - - -
47. anks4b ENSDARG00000036846 8 1 - - - - 1.000 - - - - ankyrin repeat and sterile alpha motif domain containing 4B [Source:ZFIN;Acc:ZDB-GENE-040704-29]
48. SNORD15_1 SNORD15_1 1 1 - - - - 1.000 - - - -
49. si:ch211-11i5.3 si:ch211-11i5.3 7 1 - - - - 1.000 - - - -
50. nrn1la ENSDARG00000069368, ENSDARG00000112044, ENSDARG00000112869 16 1 - - - - 1.000 - - - - neuritin 1-like a [Source:NCBI gene;Acc:100004307]
51. BX004816.1 ENSDARG00000040497 0 1 - - - - 1.000 - - - - GTPase IMAP family member 4-like [Source:NCBI gene;Acc:571124]
52. kiss1 ENSDARG00000075829 4 1 - - - - 1.000 - - - - KiSS-1 metastasis suppressor [Source:ZFIN;Acc:ZDB-GENE-080128-1]
53. FETUB ENSDARG00000053973 4 1 - - - - 1.000 - - - - fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
54. CU655969.1 CU655969.1 0 1 - - - - 1.000 - - - -
55. CCDC74B CCDC74B 8 1 - - - - 1.000 - - - -
56. PEG3_18 PEG3_18 0 1 - - - - 1.000 - - - -
57. v2ra17 ENSDARG00000056180 0 1 - - - - 1.000 - - - - vomeronasal 2 receptor, a17 [Source:ZFIN;Acc:ZDB-GENE-050419-130]
58. hhat ENSDARG00000074428 8 1 - - - - 1.000 - - - - hedgehog acyltransferase [Source:ZFIN;Acc:ZDB-GENE-051118-1]
59. HRH2 HRH2 3 1 - - 1.000 - - - - - -
60. si:dkey-20j3.4 si:dkey-20j3.4 4 1 - - - - 1.000 - - - -
61. CR356247.1 CR356247.1 2 1 - - - - 1.000 - - - -
62. BX649490.1 ENSDARG00000091718 7 1 - - - - 1.000 - - - - titin-like [Source:NCBI gene;Acc:101883412]
63. CU694951.3 CU694951.3 0 1 - - - - 1.000 - - - -
64. si:ch211-251p5.3 si:ch211-251p5.3 39 1 - - - - 1.000 - - - -
65. si:dkey-119g10.4 si:dkey-119g10.4 7 1 - - - - 1.000 - - - -
66. zgc:173708 zgc:173708 2 1 - - - - 1.000 - - - -
67. CABZ01001466.1 CABZ01001466.1 1 1 - - - - 1.000 - - - -
68. shank3a ENSDARG00000063332 5 1 - - - - 1.000 - - - - SH3 and multiple ankyrin repeat domains 3a [Source:ZFIN;Acc:ZDB-GENE-060503-369]
69. zgc:113176 ENSDARG00000040487 30 1 - - - - 1.000 - - - - zgc:113176 [Source:ZFIN;Acc:ZDB-GENE-050327-60]
70. si:dkey-23o4.6 ENSDARG00000034577, ENSDARG00000113997 1 1 - - - - 1.000 - - - - si:dkey-23o4.6 [Source:ZFIN;Acc:ZDB-GENE-100922-3]
71. si:dkey-71h2.4 si:dkey-71h2.4 6 1 - - 1.000 - - - - - -
72. CABZ01085394.1 CABZ01085394.1 0 1 - - - - 1.000 - - - -
73. svopa ENSDARG00000056833 14 1 - - - - 1.000 - - - - SV2 related protein a [Source:ZFIN;Acc:ZDB-GENE-060526-336]
74. dnajc5b ENSDARG00000058147 6 1 - - - - 1.000 - - - - DnaJ (Hsp40) homolog, subfamily C, member 5 beta [Source:ZFIN;Acc:ZDB-GENE-050413-1]
75. si:ch211-152c8.4 ENSDARG00000101110 6 1 - - 1.000 - - - - - - si:ch211-152c8.4 [Source:ZFIN;Acc:ZDB-GENE-091204-235]
76. phc3 ENSDARG00000074604 2 1 - - - - 1.000 - - - - polyhomeotic homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070912-369]
77. si:dkey-258f14.3 ENSDARG00000075974 9 1 - - - - 1.000 - - - - si:dkey-258f14.3 [Source:ZFIN;Acc:ZDB-GENE-050809-43]
78. or111-11 ENSDARG00000041019 5 1 - - - - 1.000 - - - - odorant receptor, family D, subfamily 111, member 11 [Source:ZFIN;Acc:ZDB-GENE-010308-10]
79. fam57bb ENSDARG00000074564 2 1 - - - - 1.000 - - - - family with sequence similarity 57, member Bb [Source:ZFIN;Acc:ZDB-GENE-110603-2]
80. wnt3a ENSDARG00000058822 5 1 - - 1.000 - - - - - - wingless-type MMTV integration site family, member 3A [Source:ZFIN;Acc:ZDB-GENE-001106-1]
81. gzmk ENSDARG00000028780 1 1 - - - - 1.000 - - - - granzyme K [Source:ZFIN;Acc:ZDB-GENE-091204-352]
82. BX897720.4 BX897720.4 0 1 - - - - 1.000 - - - -
83. CU694320.1 CU694320.1 6 1 - - - - 1.000 - - - -
84. rhol ENSDARG00000070666 0 1 - - - - 1.000 - - - - rhodopsin, like [Source:ZFIN;Acc:ZDB-GENE-070424-6]
85. si:dkey-94e7.2 ENSDARG00000068474 14 1 - - - - 1.000 - - - - si:dkey-94e7.2 [Source:ZFIN;Acc:ZDB-GENE-070912-611]
86. tcf3a ENSDARG00000005915 12 1 - - - - 1.000 - - - - transcription factor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-51]
87. si:dkey-121j17.5 ENSDARG00000014232 18 1 - - 1.000 - - - - - - si:dkey-121j17.5 [Source:ZFIN;Acc:ZDB-GENE-030131-4745]
88. nfil3-4 ENSDARG00000092346 3 1 - - - - 1.000 - - - - nuclear factor, interleukin 3 regulated, member 4 [Source:ZFIN;Acc:ZDB-GENE-070424-214]
89. phox2bb ENSDARG00000091029 2 1 - - - - 1.000 - - - - paired-like homeobox 2bb [Source:ZFIN;Acc:ZDB-GENE-050407-3]
90. zgc:193682 zgc:193682 15 1 - - 1.000 - - - - - -
91. st3gal1l ENSDARG00000079310 10 1 - - - - 1.000 - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 1, like [Source:ZFIN;Acc:ZDB-GENE-060321-2]
92. XYLT2 ENSDARG00000059557 1 1 - - - - 1.000 - - - - xylosyltransferase II [Source:ZFIN;Acc:ZDB-GENE-081022-125]
93. zgc:175107 ENSDARG00000075417 39 1 - - - - 1.000 - - - - zgc:175107 [Source:ZFIN;Acc:ZDB-GENE-080220-38]
94. BX323796.1 BX323796.1 2 1 - - - - 1.000 - - - -
95. C17orf105 C17orf105 1 1 - - - - 1.000 - - - -
96. SLC25A22_1 SLC25A22_1 3 1 - - - - 1.000 - - - -
97. rtn4rl2b ENSDARG00000037495 11 1 - - 1.000 - - - - - - reticulon 4 receptor-like 2b [Source:ZFIN;Acc:ZDB-GENE-040310-2]
98. c6ast3 ENSDARG00000024503 2 1 - - - - 1.000 - - - - six-cysteine containing astacin protease 3 [Source:ZFIN;Acc:ZDB-GENE-050320-99]
99. ALOX5_1 ALOX5_1 0 1 - - - - 1.000 - - - -
100. si:dkeyp-46h3.3 ENSDARG00000092887 11 1 - - - - 1.000 - - - - si:dkeyp-46h3.3 [Source:ZFIN;Acc:ZDB-GENE-060503-748]

There are 124 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA