Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-271g18.2

Gene Name Gene ID Reads Annotation
si:ch211-271g18.2 si:ch211-271g18.2 34










Genes with expression patterns similar to si:ch211-271g18.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-271g18.2 si:ch211-271g18.2 34 8 1.000 1.000 1.000 - 1.000 1.000 1.000 1.000 1.000
2. CABZ01078515.1 CABZ01078515.1 25 2.404 - 0.743 - - - - 0.839 0.822 -
3. hcn4l ENSDARG00000074419 46 2.397 0.822 - - - - 0.826 0.749 - - hyperpolarization activated cyclic nucleotide-gated potassium channel 4l [Source:ZFIN;Acc:ZDB-GENE-110411-3]
4. slc6a1l ENSDARG00000041205 1 2 - - 1.000 - - - - - 1.000 solute carrier family 6 (neurotransmitter transporter, GABA), member 1, like [Source:ZFIN;Acc:ZDB-GENE-041210-296]
5. qdprb2 ENSDARG00000086859, ENSDARG00000090118, ENSDARG00000113718, ENSDARG00000116809 5 1.888 - - 1.000 - - 0.888 - - - quinoid dihydropteridine reductase b2 [Source:ZFIN;Acc:ZDB-GENE-070720-19]
6. panx2 ENSDARG00000063019 3 1.839 - - - - - - 0.839 - 1.000 pannexin 2 [Source:ZFIN;Acc:ZDB-GENE-050419-55]
7. rpe65c ENSDARG00000054420, ENSDARG00000113640 28 1.819 - - 0.819 - - - - - 1.000 retinal pigment epithelium-specific protein 65c [Source:ZFIN;Acc:ZDB-GENE-081104-505]
8. si:ch211-219f7.3 si:ch211-219f7.3 48 1.791 - 0.791 1.000 - - - - - -
9. park2 42 1.775 0.882 - - - - 0.893 - - - parkin RBR E3 ubiquitin protein ligase
10. wasa ENSDARG00000015149 26 1.749 - - 0.867 - - 0.882 - - - Wiskott-Aldrich syndrome (eczema-thrombocytopenia) a [Source:ZFIN;Acc:ZDB-GENE-081104-419]
11. si:rp71-1c10.11 ENSDARG00000096721 39 1.747 - - 1.000 - - - 0.747 - - si:rp71-1c10.11 [Source:ZFIN;Acc:ZDB-GENE-130603-61]
12. otc ENSDARG00000062147 95 1.744 0.899 - - - - 0.845 - - - ornithine carbamoyltransferase [Source:ZFIN;Acc:ZDB-GENE-070912-422]
13. gsg1l ENSDARG00000037390 181 1.738 - - 0.850 - - 0.888 - - - gsg1-like [Source:ZFIN;Acc:ZDB-GENE-050913-27]
14. PRKCA_1 ENSDARG00000099841 12 1.724 0.865 - - - - - - - 0.859 protein kinase C alpha [Source:HGNC Symbol;Acc:HGNC:9393]
15. slain1a ENSDARG00000019185, ENSDARG00000109350, ENSDARG00000112333, ENSDARG00000116098 135 1.723 - 0.783 - - - - 0.940 - - SLAIN motif family, member 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7751]
16. fgf10a ENSDARG00000030932, ENSDARG00000116867 205 1.715 0.854 0.861 - - - - - - - fibroblast growth factor 10a [Source:ZFIN;Acc:ZDB-GENE-030715-1]
17. igsf5 igsf5 85 1.704 0.865 - - - - - 0.839 - -
18. sytl4 ENSDARG00000102433 19 1.692 - - 0.782 - - 0.910 - - - synaptotagmin-like 4 [Source:ZFIN;Acc:ZDB-GENE-070209-217]
19. si:dkey-10o6.2 ENSDARG00000074628 22 1.692 - 0.804 - - - 0.888 - - - si:dkey-10o6.2 [Source:ZFIN;Acc:ZDB-GENE-070705-284]
20. il11b ENSDARG00000058557 17 1.692 - 0.804 - - - 0.888 - - - interleukin 11b [Source:ZFIN;Acc:ZDB-GENE-051019-2]
21. gorab ENSDARG00000042031 483 1.679 0.782 0.897 - - - - - - - golgin, rab6-interacting [Source:ZFIN;Acc:ZDB-GENE-040426-1384]
22. exoc6b ENSDARG00000098874, ENSDARG00000110437 627 1.667 0.772 0.895 - - - - - - - exocyst complex component 6B [Source:ZFIN;Acc:ZDB-GENE-060929-132]
23. pax7a ENSDARG00000100398, ENSDARG00000111233 37 1.665 - - - - - 0.826 0.839 - - paired box 7a [Source:ZFIN;Acc:ZDB-GENE-990415-201]
24. RNASEH2C_1 RNASEH2C_1 10 1.663 - 0.804 - - - - - - 0.859
25. si:dkey-30c15.9 si:dkey-30c15.9 4 1.661 - - - - - - 0.839 0.822 -
26. kcnh4 kcnh4 6 1.66 - - - - - 0.888 - - 0.772
27. CR339051.1 CR339051.1 9 1.658 - - 0.819 - - - 0.839 - -
28. nrsn1 ENSDARG00000111235 123 1.652 - - 0.743 - - - 0.909 - - neurensin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7491]
29. acoxl ENSDARG00000020149 14 1.643 - 0.804 - - - - 0.839 - - acyl-CoA oxidase-like [Source:ZFIN;Acc:ZDB-GENE-081107-18]
30. ulk3 ENSDARG00000101661 69 1.643 - 0.804 - - - - 0.839 - - unc-51 like kinase 3 [Source:ZFIN;Acc:ZDB-GENE-070410-33]
31. nkx2.2a ENSDARG00000053298 747 1.642 - - - - - - 0.838 - 0.804 NK2 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-403]
32. rab3db ENSDARG00000101534 45 1.637 - 0.761 - - - 0.876 - - - RAB3D, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040718-428]
33. trim23 ENSDARG00000069420 103 1.629 - - - - - 0.859 0.770 - - tripartite motif containing 23 [Source:ZFIN;Acc:ZDB-GENE-060929-804]
34. si:ch211-51n3.1 si:ch211-51n3.1 26 1.626 - 0.804 - - - - - 0.822 -
35. inppl1b ENSDARG00000001442 41 1.616 - 0.804 - - - 0.812 - - - inositol polyphosphate phosphatase-like 1b [Source:ZFIN;Acc:ZDB-GENE-030616-75]
36. TMBIM1 TMBIM1 2 1.611 - - - - - - 0.839 - 0.772
37. sv2 ENSDARG00000091833 22 1.609 - 0.759 0.850 - - - - - - synaptic vesicle glycoprotein 2 [Source:ZFIN;Acc:ZDB-GENE-000607-80]
38. si:ch211-132g1.6 ENSDARG00000093102 13 1.604 - - 0.900 - 0.704 - - - - si:ch211-132g1.6 [Source:ZFIN;Acc:ZDB-GENE-091204-469]
39. vil1 ENSDARG00000040466 81 1.598 0.819 0.779 - - - - - - - villin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-799]
40. yif1b ENSDARG00000040505 47 1.595 - 0.800 - - - - - - 0.795 Yip1 interacting factor homolog B (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041114-16]
41. hist2h3c ENSDARG00000094154 124 1.592 - 0.753 - - - 0.839 - - - histone cluster 2, H3c [Source:ZFIN;Acc:ZDB-GENE-070424-8]
42. zgc:113443 359 1.589 0.861 - - - - 0.728 - - - zgc:113443, transcript variant X3
43. ephb2b ENSDARG00000021539 521 1.581 - 0.816 - - - - 0.765 - - eph receptor B2b [Source:ZFIN;Acc:ZDB-GENE-050522-415]
44. mtnr1aa ENSDARG00000037545, ENSDARG00000114868 40 1.573 - - 0.805 - - - 0.768 - - melatonin receptor 1A a [Source:ZFIN;Acc:ZDB-GENE-990415-155]
45. zgc:136895 zgc:136895 41 1.572 - 0.767 - - - 0.805 - - -
46. ADCK3 101 1.564 - 0.778 - - - - 0.786 - - aarF domain containing kinase 3
47. si:ch211-126i22.5 ENSDARG00000060911 209 1.558 0.823 - - - - 0.735 - - - si:ch211-126i22.5 [Source:ZFIN;Acc:ZDB-GENE-091204-183]
48. spon1b ENSDARG00000023694, ENSDARG00000110889 586 1.555 - 0.717 - - - - 0.838 - - spondin 1b [Source:ZFIN;Acc:ZDB-GENE-000427-10]
49. FAM150A 14 1.555 - - 0.716 - - - 0.839 - - family with sequence similarity 150 member A, transcript variant X2
50. lnx2a ENSDARG00000029177, ENSDARG00000112805 121 1.547 0.785 0.762 - - - - - - - ligand of numb-protein X 2a [Source:ZFIN;Acc:ZDB-GENE-060228-2]
51. SAYSD1 SAYSD1 149 1.532 - 0.751 - - - 0.781 - - -
52. tert ENSDARG00000042637 463 1.475 0.729 - - - - 0.746 - - - telomerase reverse transcriptase [Source:ZFIN;Acc:ZDB-GENE-080405-1]
53. sass6 ENSDARG00000058346 225 1.455 - 0.742 - - - 0.713 - - - SAS-6 centriolar assembly protein [Source:ZFIN;Acc:ZDB-GENE-040426-2784]
54. vetz 12 1.429 - 0.721 0.708 - - - - - - vezatin, adherens junctions transmembrane protein, transcript variant X2
55. PEG3_27 PEG3_27 10 1 - - 1.000 - - - - - -
56. CT009593.1 CT009593.1 1 1 - - 1.000 - - - - - -
57. FAM131A ENSDARG00000077022 3 1 - - 1.000 - - - - - - family with sequence similarity 131, member A [Source:ZFIN;Acc:ZDB-GENE-080204-112]
58. CABZ01023423.1 CABZ01023423.1 8 1 - - 1.000 - - - - - -
59. si:ch211-227e10.2 ENSDARG00000100414 1 1 - - 1.000 - - - - - - si:ch211-227e10.2 [Source:ZFIN;Acc:ZDB-GENE-050419-8]
60. serpinf2a ENSDARG00000076448 4 1 - - - - - - - - 1.000 serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 2a [Source:ZFIN;Acc:ZDB-GENE-060822-1]
61. BX470224.1 ENSDARG00000092793 22 1 - - 1.000 - - - - - -
62. nsun5_1 ENSDARG00000043209 3 1 - - - - - - - - 1.000 NOP2/Sun domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2476]
63. mir150 ENSDARG00000081593 4 1 - - - - - - - - 1.000 microRNA 150 [Source:NCBI gene;Acc:100033674]
64. sv2bb ENSDARG00000060711 196 1 - - - - - - - - 1.000 synaptic vesicle glycoprotein 2Bb [Source:ZFIN;Acc:ZDB-GENE-030131-2789]
65. rimbp2 ENSDARG00000001154, ENSDARG00000093752 1 1 - - - - - - - - 1.000 RIMS binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040724-96]
66. CR936484.1 CR936484.1 1 1 - - 1.000 - - - - - -
67. NUMA1_1 NUMA1_1 1 1 - - 1.000 - - - - - -
68. si:dkey-88l16.5 ENSDARG00000094850 12 1 - - 1.000 - - - - - - si:dkey-88l16.5 [Source:ZFIN;Acc:ZDB-GENE-091204-332]
69. adrb3b ENSDARG00000052919 16 1 - - 1.000 - - - - - - adrenoceptor beta 3b [Source:ZFIN;Acc:ZDB-GENE-081022-154]
70. si:ch211-113a14.26_3 6 1 - - - - - - - - 1.000 si:ch211-113a14.26
71. ptprda 1 1 - - - - - - - - 1.000 protein tyrosine phosphatase, receptor type, D, a
72. ANO1 ENSDARG00000102335 1 1 - - 1.000 - - - - - - anoctamin 1, calcium activated chloride channel [Source:ZFIN;Acc:ZDB-GENE-121127-3]
73. si:ch73-373m9.1 si:ch73-373m9.1 0 1 - - - - - - - - 1.000
74. mical3a_1 ENSDARG00000021979, ENSDARG00000097017 1 1 - - 1.000 - - - - - - microtubule associated monooxygenase, calponin and LIM domain containing 3a [Source:ZFIN;Acc:ZDB-GENE-050126-2]
75. stk32a ENSDARG00000079499 17 1 - - - - - - - - 1.000 serine/threonine kinase 32A [Source:ZFIN;Acc:ZDB-GENE-091204-271]
76. IQGAP3 ENSDARG00000098650 5 1 - - - - - - - - 1.000 IQ motif containing GTPase activating protein 3 [Source:ZFIN;Acc:ZDB-GENE-160226-1]
77. zgc:136924 zgc:136924 0 1 - - - - - - - - 1.000
78. or115-15 ENSDARG00000079294 1 1 - - - - - - - - 1.000 odorant receptor, family F, subfamily 115, member 15 [Source:ZFIN;Acc:ZDB-GENE-990415-189]
79. gig2p ENSDARG00000088260 5 1 - - - - - - - - 1.000 grass carp reovirus (GCRV)-induced gene 2p [Source:ZFIN;Acc:ZDB-GENE-070705-490]
80. C19H1orf216 1 1 - - 1.000 - - - - - - chromosome 19 C1orf216 homolog
81. frmd7 ENSDARG00000068958 1 1 - - - - - - - - 1.000 FERM domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-060825-67]
82. CLDN10_1 CLDN10_1 71 1 - - - - - - - - 1.000
83. wee1 ENSDARG00000093864, ENSDARG00000114333, ENSDARG00000115653 1 1 - - - - - - - - 1.000 WEE1 G2 checkpoint kinase [Source:ZFIN;Acc:ZDB-GENE-030131-5268]
84. si:ch211-287c22.2 si:ch211-287c22.2 1 1 - - 1.000 - - - - - -
85. si:ch211-126g16.8 3 1 - - 1.000 - - - - - - si:ch211-126g16.8, transcript variant X1
86. or109-11 ENSDARG00000105708 3 1 - - 1.000 - - - - - - odorant receptor, family D, subfamily 109, member 11 [Source:ZFIN;Acc:ZDB-GENE-070806-74]
87. mib mib 1 1 - - 1.000 - - - - - -
88. PLA2G4C PLA2G4C 0 1 - - - - - - - - 1.000
89. si:dkey-30j22.1 ENSDARG00000042829 25 1 - - 1.000 - - - - - - si:dkey-30j22.1 [Source:ZFIN;Acc:ZDB-GENE-041001-184]
90. CCNO 21 1 - - 1.000 - - - - - - cyclin O
91. moxd1l ENSDARG00000069296, ENSDARG00000115126 2 1 - - - - - - - - 1.000 monooxygenase, DBH-like 1, like [Source:ZFIN;Acc:ZDB-GENE-060126-3]
92. tipin ENSDARG00000036136, ENSDARG00000110772 3 1 - - - - - - - - 1.000 timeless interacting protein [Source:ZFIN;Acc:ZDB-GENE-040801-189]
93. cdk19 ENSDARG00000043858, ENSDARG00000114957 0 1 - - - - - - - - 1.000 cyclin-dependent kinase 19 [Source:ZFIN;Acc:ZDB-GENE-040724-19]
94. si:ch211-241e1.4 si:ch211-241e1.4 0 1 - - - - - - - - 1.000
95. zbbx ENSDARG00000069723 6 1 - - - - - - - - 1.000 zinc finger, B-box domain containing [Source:ZFIN;Acc:ZDB-GENE-061207-76]
96. KCNK17 ENSDARG00000105453 16 1 - - - - - - - - 1.000 potassium channel, subfamily K, member 17 [Source:ZFIN;Acc:ZDB-GENE-120113-3]
97. si:dkey-184j23.1 1 1 - - - - - - - 1.000 - si:dkey-184j23.1
98. cfhl5 ENSDARG00000105052 25 1 - - 1.000 - - - - - - complement factor H like 5 [Source:ZFIN;Acc:ZDB-GENE-050208-782]
99. or103-5 ENSDARG00000075128 1 1 - - - - - - - - 1.000 odorant receptor, family C, subfamily 103, member 5 [Source:ZFIN;Acc:ZDB-GENE-070806-52]
100. CUL9 2 1 - - - - - - - - 1.000 cullin 9

There are 1321 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA