Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-268b13.3

Gene Name Gene ID Reads Annotation
si:ch211-268b13.3 si:ch211-268b13.3 28










Genes with expression patterns similar to si:ch211-268b13.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-268b13.3 si:ch211-268b13.3 28 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. inpp5d ENSDARG00000074283, ENSDARG00000116834 12 2 1.000 1.000 - - - - - - - inositol polyphosphate-5-phosphatase D [Source:ZFIN;Acc:ZDB-GENE-100922-30]
3. il1rapl1b ENSDARG00000104853 52 1.949 - 1.000 - - 0.949 - - - - interleukin 1 receptor accessory protein-like 1b [Source:ZFIN;Acc:ZDB-GENE-090109-2]
4. cadpsa ENSDARG00000043661 160 1.881 1.000 0.881 - - - - - - - Ca2+-dependent activator protein for secretion a [Source:ZFIN;Acc:ZDB-GENE-030616-525]
5. U11 U11 11 1.852 0.852 1.000 - - - - - - -
6. DHX32 DHX32 181 1.852 - 1.000 - - - - 0.852 - -
7. lingo3a ENSDARG00000061970 234 1.82 1.000 0.820 - - - - - - - leucine rich repeat and Ig domain containing 3a [Source:ZFIN;Acc:ZDB-GENE-060503-54]
8. tnni3k ENSDARG00000086933 37 1.8 - 1.000 - 0.800 - - - - - TNNI3 interacting kinase [Source:ZFIN;Acc:ZDB-GENE-081104-399]
9. CABZ01087025.1 ENSDARG00000117232 10 1.766 - 1.000 - 0.766 - - - - -
10. cacna1c ENSDARG00000008398 193 1.749 - 1.000 - - - - 0.749 - - calcium channel, voltage-dependent, L type, alpha 1C subunit [Source:ZFIN;Acc:ZDB-GENE-020129-1]
11. cabp2a ENSDARG00000052016 19 1.744 - 1.000 - - 0.744 - - - - calcium binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-050913-25]
12. CABZ01078431.1 CABZ01078431.1 183 1.741 1.000 - - - - 0.741 - - -
13. clcn1a ENSDARG00000062084 120 1.741 - 1.000 - - 0.741 - - - - chloride channel, voltage-sensitive 1a [Source:ZFIN;Acc:ZDB-GENE-060503-333]
14. CR753817.1 ENSDARG00000110927 26 1.726 - 1.000 - - - 0.726 - - -
15. mir124-1 10 1.726 1.000 - - - - 0.726 - - - microRNA 124-1
16. tekt1 ENSDARG00000101331 27 1.726 1.000 - - - - - 0.726 - - tektin 1 [Source:ZFIN;Acc:ZDB-GENE-041114-99]
17. si:dkey-57a22.12 si:dkey-57a22.12 23 1.726 1.000 - - - - 0.726 - - -
18. BX248582.3 BX248582.3 3 1.726 - 1.000 - - - 0.726 - - -
19. CABZ01090303.1 CABZ01090303.1 2 1.726 1.000 - - - - 0.726 - - -
20. cxxc4 ENSDARG00000077817 197 1.726 1.000 - - - - 0.726 - - - CXXC finger 4 [Source:ZFIN;Acc:ZDB-GENE-090313-179]
21. opcml ENSDARG00000013005 18 1.718 1.000 - - - - 0.718 - - - opioid binding protein/cell adhesion molecule-like [Source:ZFIN;Acc:ZDB-GENE-040927-3]
22. ncam2 ENSDARG00000017466 175 1.718 - 1.000 - - - 0.718 - - - neural cell adhesion molecule 2 [Source:ZFIN;Acc:ZDB-GENE-010822-1]
23. TTBK1 TTBK1 120 1.709 - 1.000 - - - 0.709 - - -
24. si:ch211-187f22.2 si:ch211-187f22.2 7 1.705 1.000 - - - - - 0.705 - -
25. p4ha1a_1 ENSDARG00000033537, ENSDARG00000114754 36 1.681 - 0.955 - - - 0.726 - - - prolyl 4-hydroxylase, alpha polypeptide I a [Source:ZFIN;Acc:ZDB-GENE-040724-91]
26. elovl2 ENSDARG00000045414 119 1.617 - 0.912 - - - - 0.705 - - ELOVL fatty acid elongase 2 [Source:ZFIN;Acc:ZDB-GENE-060421-5612]
27. si:dkey-256i11.4 si:dkey-256i11.4 3 1.593 - - - - 0.754 - 0.839 - -
28. otop2 ENSDARG00000006522 61 1.592 - 0.781 - - - 0.811 - - - otopetrin 2 [Source:ZFIN;Acc:ZDB-GENE-050104-2]
29. srgap2b srgap2b 80 1.591 - - - - - 0.781 0.810 - -
30. nmba ENSDARG00000068144 9 1.584 - - - 0.733 0.851 - - - - neuromedin Ba [Source:ZFIN;Acc:ZDB-GENE-050419-3]
31. si:ch211-10a23.2 ENSDARG00000060656 471 1.575 0.797 - - - - 0.778 - - - si:ch211-10a23.2 [Source:ZFIN;Acc:ZDB-GENE-090313-9]
32. purg ENSDARG00000099187, ENSDARG00000114450 33 1.567 - 0.729 - - - - - 0.838 - purine-rich element binding protein G [Source:ZFIN;Acc:ZDB-GENE-070702-3]
33. hoxa2b ENSDARG00000023031 706 1.546 0.765 - - - - - 0.781 - - homeobox A2b [Source:ZFIN;Acc:ZDB-GENE-990415-98]
34. CABZ01054965.1 ENSDARG00000090844 74 1.528 - 0.767 - - - - 0.761 - - interleukin-1 receptor type 1-like [Source:NCBI gene;Acc:799279]
35. prdm8b ENSDARG00000054683, ENSDARG00000112649 270 1.522 0.716 - - - - 0.806 - - - PR domain containing 8b [Source:ZFIN;Acc:ZDB-GENE-060526-174]
36. FAM188B FAM188B 145 1.519 0.761 0.758 - - - - - - -
37. FAM83F FAM83F 8 1.519 - - - 0.814 - - 0.705 - -
38. dscama ENSDARG00000024865 75 1.511 - 0.712 - - - 0.799 - - - Down syndrome cell adhesion molecule a [Source:ZFIN;Acc:ZDB-GENE-050310-7]
39. GPR137B GPR137B 50 1.507 - - - - - 0.718 0.789 - -
40. si:dkey-7c18.24 ENSDARG00000041433, ENSDARG00000113434, ENSDARG00000116523 89 1.495 - - - - - 0.762 0.733 - - si:dkey-7c18.24 [Source:ZFIN;Acc:ZDB-GENE-041014-63]
41. CABZ01069519.1 CABZ01069519.1 64 1.493 0.749 - - - - - 0.744 - -
42. antxr2a ENSDARG00000104118, ENSDARG00000111517 12 1.486 - - - - - 0.781 0.705 - - ANTXR cell adhesion molecule 2a [Source:ZFIN;Acc:ZDB-GENE-060526-14]
43. si:dkey-147f3.4 ENSDARG00000071029, ENSDARG00000092077 36 1.484 0.758 - - - - 0.726 - - - si:dkey-147f3.4 [Source:ZFIN;Acc:ZDB-GENE-061009-29]
44. gltpb ENSDARG00000077962 5 1.478 - - - - 0.752 0.726 - - - glycolipid transfer protein b [Source:ZFIN;Acc:ZDB-GENE-091118-80]
45. si:dkey-208k4.1 si:dkey-208k4.1 15 1.473 - 0.747 - - - 0.726 - - -
46. si:dkey-122c11.7 ENSDARG00000103721 3 1.47 - - - - 0.744 0.726 - - - si:dkey-122c11.7 [Source:ZFIN;Acc:ZDB-GENE-110913-120]
47. CABZ01044611.1 CABZ01044611.1 8 1.47 - - - - 0.744 0.726 - - -
48. scg5 ENSDARG00000032126, ENSDARG00000077045 29 1.462 - - - - 0.709 0.753 - - - secretogranin V [Source:ZFIN;Acc:ZDB-GENE-040426-1687]
49. RSF1_2 RSF1_2 1343 1.457 - - - - - 0.730 0.727 - -
50. plaub ENSDARG00000039145 35 1.447 - 0.729 - - - 0.718 - - - plasminogen activator, urokinase b [Source:ZFIN;Acc:ZDB-GENE-030619-15]
51. efemp2b_1 ENSDARG00000020811 77 1.447 - 0.721 - - - 0.726 - - - EGF containing fibulin extracellular matrix protein 2b [Source:ZFIN;Acc:ZDB-GENE-030219-125]
52. st8sia1_1 ENSDARG00000098221 16 1.438 - - - - - 0.718 0.720 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-051005-1]
53. grn1 ENSDARG00000089362 20 1.431 - 0.729 - 0.702 - - - - - granulin 1 [Source:ZFIN;Acc:ZDB-GENE-060103-1]
54. snx21 ENSDARG00000062770, ENSDARG00000111065 9 1.431 - - - - - 0.726 0.705 - - sorting nexin family member 21 [Source:ZFIN;Acc:ZDB-GENE-061013-557]
55. ela3l ENSDARG00000007276 11 1.431 - - - - - 0.726 0.705 - - elastase 3 like [Source:ZFIN;Acc:ZDB-GENE-060710-2]
56. CU694319.1 CU694319.1 72 1 - 1.000 - - - - - - -
57. KBTBD11 ENSDARG00000104958 8 1 - 1.000 - - - - - - - kelch repeat and BTB (POZ) domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-130530-678]
58. rag2 ENSDARG00000052121 15 1 1.000 - - - - - - - - recombination activating gene 2 [Source:ZFIN;Acc:ZDB-GENE-990415-235]
59. U3_10 U3_10 1 1 1.000 - - - - - - - -
60. CU459094.1 ENSDARG00000110517 17 1 - 1.000 - - - - - - - uncharacterized LOC108191666 [Source:NCBI gene;Acc:108191666]
61. lenep ENSDARG00000095553 11 1 1.000 - - - - - - - - lens epithelial protein [Source:ZFIN;Acc:ZDB-GENE-060130-3]
62. si:ch211-202m22.1 ENSDARG00000094491 24 1 1.000 - - - - - - - - si:ch211-202m22.1 [Source:ZFIN;Acc:ZDB-GENE-060531-31]
63. zgc:110434 21 1 1.000 - - - - - - - - zgc:110434
64. DYNC1H1 ENSDARG00000014717 11 1 - 1.000 - - - - - - - dynein, cytoplasmic 1, heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7050]
65. nr5a1a ENSDARG00000103176 12 1 1.000 - - - - - - - - nuclear receptor subfamily 5, group A, member 1a [Source:ZFIN;Acc:ZDB-GENE-010504-1]
66. TDRD15 TDRD15 46 1 1.000 - - - - - - - -
67. lrp1ba ENSDARG00000004789, ENSDARG00000094171 3 1 1.000 - - - - - - - - low density lipoprotein receptor-related protein 1Ba [Source:ZFIN;Acc:ZDB-GENE-050208-608]
68. si:ch211-245j22.3 ENSDARG00000041379, ENSDARG00000110219, ENSDARG00000110924 3 1 1.000 - - - - - - - - si:ch211-245j22.3 [Source:ZFIN;Acc:ZDB-GENE-050419-38]
69. pdia2 ENSDARG00000018263 74 1 1.000 - - - - - - - - protein disulfide isomerase family A, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-705]
70. zgc:113209 ENSDARG00000100294 176 1 1.000 - - - - - - - - zgc:113209 [Source:ZFIN;Acc:ZDB-GENE-050410-8]
71. elovl4b ENSDARG00000027495 107 1 1.000 - - - - - - - - ELOVL fatty acid elongase 4b [Source:ZFIN;Acc:ZDB-GENE-030131-7672]
72. si:ch211-272h9.5 ENSDARG00000092167 8 1 - 1.000 - - - - - - - si:ch211-272h9.5 [Source:ZFIN;Acc:ZDB-GENE-070705-167]
73. TNFRSF14_1 TNFRSF14_1 165 1 - 1.000 - - - - - - -
74. zgc:172053 ENSDARG00000038321 9 1 1.000 - - - - - - - - zgc:172053 [Source:ZFIN;Acc:ZDB-GENE-080219-25]
75. caps2 ENSDARG00000058486 4 1 - 1.000 - - - - - - - calcyphosine 2 [Source:ZFIN;Acc:ZDB-GENE-091204-449]
76. BRPF1 ENSDARG00000103665 10 1 - 1.000 - - - - - - - bromodomain and PHD finger containing, 1 [Source:ZFIN;Acc:ZDB-GENE-040426-731]
77. CR381673.2 ENSDARG00000103241 7 1 - 1.000 - - - - - - -
78. nobox 5 1 - 1.000 - - - - - - - NOBOX oogenesis homeobox
79. pax4 ENSDARG00000021336 29 1 - 1.000 - - - - - - - paired box 4 [Source:ZFIN;Acc:ZDB-GENE-041210-244]
80. cldnd ENSDARG00000006580 17 1 1.000 - - - - - - - - claudin d [Source:ZFIN;Acc:ZDB-GENE-010328-4]
81. Metazoa_SRP_27 Metazoa_SRP_27 2 1 1.000 - - - - - - - -
82. snx1b ENSDARG00000103529 4 1 - 1.000 - - - - - - - sorting nexin 1b [Source:ZFIN;Acc:ZDB-GENE-050913-82]
83. arl16 ENSDARG00000059498, ENSDARG00000110386 229 1 1.000 - - - - - - - - ADP-ribosylation factor-like 16 [Source:ZFIN;Acc:ZDB-GENE-070410-114]
84. si:ch211-190k17.19 ENSDARG00000095756 19 1 1.000 - - - - - - - - si:ch211-190k17.19 [Source:ZFIN;Acc:ZDB-GENE-070912-167]
85. slc12a2 ENSDARG00000104573 59 1 - 1.000 - - - - - - - solute carrier family 12 (sodium/potassium/chloride transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040625-53]
86. zgc:172079 ENSDARG00000056762, ENSDARG00000077644, ENSDARG00000105644 102 1 - 1.000 - - - - - - - zgc:172079 [Source:ZFIN;Acc:ZDB-GENE-080204-103]
87. grm1a ENSDARG00000026796 9 1 1.000 - - - - - - - - glutamate receptor, metabotropic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7893]
88. BX927317.2 ENSDARG00000101263 4 1 - 1.000 - - - - - - -
89. KLF10 1 1 - 1.000 - - - - - - - Kruppel-like factor 10
90. CU984580.1 CU984580.1 141 1 1.000 - - - - - - - -
91. ddrgk1 ENSDARG00000037172 14 1 1.000 - - - - - - - - DDRGK domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1050]
92. si:dkey-70b24.7 si:dkey-70b24.7 5 1 - 1.000 - - - - - - -
93. prrt1 ENSDARG00000062208 368 1 - 1.000 - - - - - - - proline-rich transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-686]
94. gcshb ENSDARG00000105187 182 1 1.000 - - - - - - - - glycine cleavage system protein H (aminomethyl carrier), b [Source:ZFIN;Acc:ZDB-GENE-040718-319]
95. stpg1 ENSDARG00000103765 19 1 1.000 - - - - - - - - sperm-tail PG-rich repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-070705-373]
96. si:ch211-208f21.2 ENSDARG00000094177 61 1 1.000 - - - - - - - - si:ch211-208f21.2 [Source:ZFIN;Acc:ZDB-GENE-110914-134]
97. zgc:158846 ENSDARG00000058462, ENSDARG00000113282 161 1 1.000 - - - - - - - - zgc:158846 [Source:ZFIN;Acc:ZDB-GENE-070209-50]
98. ddr2b ENSDARG00000058695 7 1 1.000 - - - - - - - - discoidin domain receptor tyrosine kinase 2b [Source:ZFIN;Acc:ZDB-GENE-060503-361]
99. htr1b ENSDARG00000053987 11 1 1.000 - - - - - - - - 5-hydroxytryptamine (serotonin) receptor 1B [Source:ZFIN;Acc:ZDB-GENE-081022-141]
100. rmnd1 ENSDARG00000027465 116 1 - 1.000 - - - - - - - required for meiotic nuclear division 1 homolog [Source:ZFIN;Acc:ZDB-GENE-050522-21]

There are 1225 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA