Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-242f23.8

Gene Name Gene ID Reads Annotation
si:ch211-242f23.8 ENSDARG00000087585 22 si:ch211-242f23.8 [Source:ZFIN;Acc:ZDB-GENE-091204-11]










Genes with expression patterns similar to si:ch211-242f23.8

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-242f23.8 ENSDARG00000087585 22 7 1.000 - 1.000 1.000 1.000 - 1.000 1.000 1.000 si:ch211-242f23.8 [Source:ZFIN;Acc:ZDB-GENE-091204-11]
2. NPTXR NPTXR 241 1.848 0.895 - - - - - 0.953 - -
3. sntg2 ENSDARG00000101660 19 1.846 1.000 - - - - - - 0.846 - syntrophin, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-060526-196]
4. KCNAB3 KCNAB3 134 1.774 0.787 - - - - - 0.987 - -
5. si:dkey-199f5.6 ENSDARG00000094400 51 1.752 1.000 - - - 0.752 - - - - si:dkey-199f5.6 [Source:ZFIN;Acc:ZDB-GENE-100922-107]
6. gcdhl gcdhl 38 1.725 0.993 - - - 0.732 - - - -
7. CABZ01021538.1 CABZ01021538.1 67 1.672 - - - - 0.732 - 0.940 - -
8. cadm1b ENSDARG00000042677 277 1.634 0.704 - - - - - 0.930 - - cell adhesion molecule 1b [Source:ZFIN;Acc:ZDB-GENE-080327-34]
9. slc29a4 ENSDARG00000059690 478 1.614 0.869 - - - - - 0.745 - - solute carrier family 29 (equilibrative nucleoside transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-070112-1932]
10. TMEM100_1 TMEM100_1 44 1.581 - - 0.851 - - - 0.730 - -
11. brd2b ENSDARG00000046087 73 1.564 0.788 - - - - - 0.776 - - bromodomain containing 2b [Source:ZFIN;Acc:ZDB-GENE-070220-1]
12. TENM2 ENSDARG00000037122 48 1.55 - - - - - - 0.776 0.774 - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
13. CAMK1 CAMK1 28 1.509 - - - - 0.733 - 0.776 - -
14. rtn4rl2a ENSDARG00000052012 5 1.483 - - - - 0.732 - - 0.751 - reticulon 4 receptor-like 2 a [Source:ZFIN;Acc:ZDB-GENE-040310-4]
15. prdm16 prdm16 1346 1.446 0.710 - - - - - 0.736 - -
16. si:ch211-67f13.7 ENSDARG00000077845 8 1 1.000 - - - - - - - - si:ch211-67f13.7 [Source:ZFIN;Acc:ZDB-GENE-090313-126]
17. SLC35D3 ENSDARG00000107442 12 1 - - - - - - 1.000 - - solute carrier family 35 member D3 [Source:HGNC Symbol;Acc:HGNC:15621]
18. PRKCA_1 ENSDARG00000099841 12 1 1.000 - - - - - - - - protein kinase C alpha [Source:HGNC Symbol;Acc:HGNC:9393]
19. ZNF648 ENSDARG00000104823 194 1 1.000 - - - - - - - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
20. fam101a 4 1 1.000 - - - - - - - - family with sequence similarity 101, member A
21. si:ch211-76m11.15 ENSDARG00000098979 6 1 1.000 - - - - - - - - si:ch211-76m11.15 [Source:ZFIN;Acc:ZDB-GENE-110411-136]
22. SYTL1 ENSDARG00000070094 282 1 1.000 - - - - - - - - synaptotagmin-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-439]
23. GPR180 73 1 1.000 - - - - - - - - G protein-coupled receptor 180, transcript variant X2
24. slc24a4b ENSDARG00000067509 33 1 1.000 - - - - - - - - solute carrier family 24 (sodium/potassium/calcium exchanger), member 4b [Source:ZFIN;Acc:ZDB-GENE-081031-75]
25. Mar-09 Mar-09 126 1 - - - - - - 1.000 - -
26. cyp2x6 ENSDARG00000079653, ENSDARG00000111425 33 1 1.000 - - - - - - - - cytochrome P450, family 2, subfamily X, polypeptide 6 [Source:ZFIN;Acc:ZDB-GENE-050320-144]
27. eif1ad ENSDARG00000016280, ENSDARG00000110436 96 1 - - - - - - 1.000 - - eukaryotic translation initiation factor 1A domain containing [Source:ZFIN;Acc:ZDB-GENE-040426-1199]
28. WNK2 ENSDARG00000104989 429 1 - - - - - - 1.000 - - WNK lysine deficient protein kinase 2 [Source:ZFIN;Acc:ZDB-GENE-160114-3]
29. CR848761.1 CR848761.1 4 1 1.000 - - - - - - - -
30. BX908804.1 ENSDARG00000002797 4 1 1.000 - - - - - - - -
31. TULP2 TULP2 38 1 1.000 - - - - - - - -
32. zgc:162331 ENSDARG00000069607 13 1 - - - - - - 1.000 - - zgc:162331 [Source:ZFIN;Acc:ZDB-GENE-070410-75]
33. Metazoa_SRP_18 Metazoa_SRP_18 4 1 1.000 - - - - - - - -
34. si:dkey-197d18.1 si:dkey-197d18.1 4 1 1.000 - - - - - - - -
35. si:dkey-13n15.2 ENSDARG00000061806, ENSDARG00000094417 4 1 1.000 - - - - - - - - si:dkey-13n15.2 [Source:ZFIN;Acc:ZDB-GENE-060526-209]
36. dao.3 ENSDARG00000035601 15 1 1.000 - - - - - - - - D-amino-acid oxidase, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1894]
37. SNORD38 SNORD38 171 1 1.000 - - - - - - - -
38. AL928712.1 AL928712.1 101 1 1.000 - - - - - - - -
39. si:dkey-175g6.2 ENSDARG00000086665 39 1 - - - - - - 1.000 - - si:dkey-175g6.2 [Source:ZFIN;Acc:ZDB-GENE-030131-8061]
40. MUC5AC MUC5AC 32 1 1.000 - - - - - - - -
41. crybb3 ENSDARG00000041301 48 1 1.000 - - - - - - - - crystallin, beta B3 [Source:ZFIN;Acc:ZDB-GENE-060130-2]
42. si:ch73-138i16.1 ENSDARG00000095562 8 1 1.000 - - - - - - - - si:ch73-138i16.1 [Source:ZFIN;Acc:ZDB-GENE-070705-208]
43. zgc:173837 ENSDARG00000076949 24 1 1.000 - - - - - - - - zgc:173837 [Source:ZFIN;Acc:ZDB-GENE-080213-12]
44. BSN_1 BSN_1 21 1 - - - - - - 1.000 - -
45. fasn_1 ENSDARG00000087657 31 1 1.000 - - - - - - - - fatty acid synthase [Source:ZFIN;Acc:ZDB-GENE-030131-7802]
46. CU929356.4 CU929356.4 86 1 1.000 - - - - - - - -
47. CT573256.1 ENSDARG00000091657 18 1 1.000 - - - - - - - - serine/threonine-protein kinase VRK1-like [Source:NCBI gene;Acc:794952]
48. igsf5 igsf5 85 1 1.000 - - - - - - - -
49. CREB3L3 CREB3L3 24 1 1.000 - - - - - - - -
50. CR381673.1 ENSDARG00000098337 7 1 1.000 - - - - - - - -
51. lipt2 ENSDARG00000069852 14 1 1.000 - - - - - - - - lipoyl(octanoyl) transferase 2 [Source:ZFIN;Acc:ZDB-GENE-060312-18]
52. ZNF337_17 ZNF337_17 12 1 1.000 - - - - - - - -
53. lrrc4.2 ENSDARG00000003020 235 1 1.000 - - - - - - - - leucine rich repeat containing 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7997]
54. DOCK4 DOCK4 78 1 - - - - - - 1.000 - -
55. RAB38 122 1 1.000 - - - - - - - - RAB38, member RAS oncogene family
56. si:ch211-208k15.1 ENSDARG00000088650 11 1 - - - - - - 1.000 - - si:ch211-208k15.1 [Source:ZFIN;Acc:ZDB-GENE-100922-189]
57. emx3 ENSDARG00000020417 85 1 1.000 - - - - - - - - empty spiracles homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-53]
58. abhd3 ENSDARG00000018809 168 0.998 - - - - - - 0.998 - - abhydrolase domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040912-90]
59. vsx1 ENSDARG00000056292, ENSDARG00000109766 442 0.996 - - - - - - 0.996 - - visual system homeobox 1 homolog, chx10-like [Source:ZFIN;Acc:ZDB-GENE-990415-205]
60. htr1fa ENSDARG00000002773, ENSDARG00000109862 38 0.995 0.995 - - - - - - - - 5-hydroxytryptamine (serotonin) receptor 1Fa [Source:ZFIN;Acc:ZDB-GENE-081105-125]
61. si:ch211-137i24.12 ENSDARG00000094537 35 0.994 - - - - - - 0.994 - - si:ch211-137i24.12 [Source:ZFIN;Acc:ZDB-GENE-060526-36]
62. gpr22 gpr22 115 0.994 - - - - - - 0.994 - -
63. pcbp3 ENSDARG00000054378 74 0.994 - - - - - - 0.994 - - poly(rC) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-157]
64. lhx5 ENSDARG00000057936 785 0.994 - - - - - - 0.994 - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
65. grk7b ENSDARG00000055534 17 0.993 0.993 - - - - - - - - G protein-coupled receptor kinase 7b [Source:ZFIN;Acc:ZDB-GENE-030904-3]
66. AP5B1 ENSDARG00000078805 62 0.993 0.993 - - - - - - - - adaptor related protein complex 5 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-131121-204]
67. si:ch211-110e4.2 si:ch211-110e4.2 12 0.993 0.993 - - - - - - - -
68. nkx2.3 ENSDARG00000039095, ENSDARG00000113490 493 0.99 0.990 - - - - - - - - NK2 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-178]
69. CR407704.1 CR407704.1 188 0.99 - - - - - - 0.990 - -
70. zgc:172106 ENSDARG00000017984 90 0.989 0.989 - - - - - - - - zgc:172106 [Source:ZFIN;Acc:ZDB-GENE-080204-42]
71. cspg5b ENSDARG00000099793 67 0.989 0.989 - - - - - - - - chondroitin sulfate proteoglycan 5b [Source:ZFIN;Acc:ZDB-GENE-060503-368]
72. pms2 ENSDARG00000075672, ENSDARG00000115929 248 0.989 0.989 - - - - - - - - PMS1 homolog 2, mismatch repair system component [Source:ZFIN;Acc:ZDB-GENE-030131-686]
73. FAM163A ENSDARG00000093021 86 0.988 0.988 - - - - - - - - family with sequence similarity 163 member A [Source:HGNC Symbol;Acc:HGNC:28274]
74. dcaf11 ENSDARG00000009868, ENSDARG00000113596 57 0.987 0.987 - - - - - - - - ddb1 and cul4 associated factor 11 [Source:ZFIN;Acc:ZDB-GENE-050809-116]
75. si:ch211-138k19.2 si:ch211-138k19.2 398 0.987 - - - - - - 0.987 - -
76. PLLP ENSDARG00000062756, ENSDARG00000109949 114 0.987 0.987 - - - - - - - - plasmolipin [Source:ZFIN;Acc:ZDB-GENE-050419-195]
77. otc ENSDARG00000062147 95 0.987 0.987 - - - - - - - - ornithine carbamoyltransferase [Source:ZFIN;Acc:ZDB-GENE-070912-422]
78. eng2a eng2a 186 0.987 0.987 - - - - - - - -
79. HSPA4L ENSDARG00000053544 363 0.986 - - - - - - 0.986 - - heat shock protein 4 like [Source:ZFIN;Acc:ZDB-GENE-030131-2412]
80. syn2a ENSDARG00000045945 434 0.983 - - - - - - 0.983 - - synapsin IIa [Source:ZFIN;Acc:ZDB-GENE-040718-341]
81. sall3b ENSDARG00000057586 982 0.983 - - - - - - 0.983 - - spalt-like transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9140]
82. zgc:113443 359 0.982 0.982 - - - - - - - - zgc:113443, transcript variant X3
83. si:ch211-133l11.10 ENSDARG00000005626 381 0.982 - - - - - - 0.982 - - si:ch211-133l11.10 [Source:ZFIN;Acc:ZDB-GENE-141219-14]
84. cacng2a ENSDARG00000032565 99 0.982 - - - - - - 0.982 - - calcium channel, voltage-dependent, gamma subunit 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1401]
85. SV2B SV2B 208 0.982 - - - - - - 0.982 - -
86. SLITRK3 SLITRK3 24 0.982 - - - - - - 0.982 - -
87. mir219-2 129 0.982 - - - - - - 0.982 - - microRNA 219-2
88. chga ENSDARG00000008829 1086 0.982 - - - - - - 0.982 - - chromogranin A [Source:ZFIN;Acc:ZDB-GENE-041010-161]
89. si:ch211-117i10.10 si:ch211-117i10.10 18 0.981 0.981 - - - - - - - -
90. tmem168b ENSDARG00000062168 17 0.981 0.981 - - - - - - - - transmembrane protein 168b [Source:ZFIN;Acc:ZDB-GENE-090406-3]
91. TUBB8P7_1 TUBB8P7_1 2722 0.98 - - - - - - 0.980 - -
92. btbd3b ENSDARG00000087517 107 0.979 - - - - - - 0.979 - - BTB (POZ) domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-041210-282]
93. mpz ENSDARG00000038609 1740 0.979 - - - - - - 0.979 - - myelin protein zero [Source:ZFIN;Acc:ZDB-GENE-010724-4]
94. cdk5r2a ENSDARG00000071011 167 0.979 - - - - - - 0.979 - - cyclin-dependent kinase 5, regulatory subunit 2a (p39) [Source:ZFIN;Acc:ZDB-GENE-050417-22]
95. mir130b 180 0.978 0.978 - - - - - - - - microRNA 130b
96. GABRG1 ENSDARG00000101995 201 0.978 - - - - - - 0.978 - - gamma-aminobutyric acid type A receptor gamma1 subunit [Source:ZFIN;Acc:ZDB-GENE-141215-66]
97. st8sia5 ENSDARG00000036584 529 0.977 - - - - - - 0.977 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-060322-8]
98. nexmifb ENSDARG00000029296 416 0.977 - - - - - - 0.977 - - neurite extension and migration factor b [Source:ZFIN;Acc:ZDB-GENE-140106-18]
99. park2 42 0.976 0.976 - - - - - - - - parkin RBR E3 ubiquitin protein ligase
100. tspear tspear 166 0.976 0.976 - - - - - - - -

There are 1481 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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