Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SYTL1

Gene Name Gene ID Reads Annotation
SYTL1 ENSDARG00000070094 282 synaptotagmin-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-439]










Genes with expression patterns similar to SYTL1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SYTL1 ENSDARG00000070094 282 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 synaptotagmin-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-439]
2. ZNF648 ENSDARG00000104823 194 1.983 1.000 - - - - 0.983 - - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
3. GRAMD2_1 GRAMD2_1 12 1.912 - - - - 0.941 0.971 - - -
4. lrrc4.2 ENSDARG00000003020 235 1.873 1.000 - - - 0.873 - - - - leucine rich repeat containing 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7997]
5. relb ENSDARG00000086173 762 1.868 0.913 - - - - 0.955 - - - v-rel avian reticuloendotheliosis viral oncogene homolog B [Source:ZFIN;Acc:ZDB-GENE-030131-9531]
6. tlk2 ENSDARG00000010779, ENSDARG00000112127 751 1.844 - 1.000 - - - 0.844 - - - tousled-like kinase 2 [Source:ZFIN;Acc:ZDB-GENE-060623-36]
7. PLLP ENSDARG00000062756, ENSDARG00000109949 114 1.842 0.987 - - - - - 0.855 - - plasmolipin [Source:ZFIN;Acc:ZDB-GENE-050419-195]
8. aldh3a2b ENSDARG00000029381 2187 1.827 0.828 0.999 - - - - - - - aldehyde dehydrogenase 3 family, member A2b [Source:ZFIN;Acc:ZDB-GENE-040912-103]
9. cnksr2b ENSDARG00000073707 664 1.819 0.819 1.000 - - - - - - - connector enhancer of kinase suppressor of Ras 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8048]
10. ap4b1 ENSDARG00000013726 382 1.795 0.971 - - - 0.824 - - - - adaptor related protein complex 4 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1284]
11. mhc1zea ENSDARG00000001470 184 1.77 0.819 - - - 0.951 - - - - major histocompatibility complex class I ZEA [Source:ZFIN;Acc:ZDB-GENE-070705-176]
12. zgc:100868 ENSDARG00000004748 2582 1.722 - 0.964 - - - 0.758 - - - zgc:100868 [Source:ZFIN;Acc:ZDB-GENE-040801-33]
13. mtx3 ENSDARG00000090195 42 1.705 0.955 - - - - - 0.750 - - metaxin 3 [Source:ZFIN;Acc:ZDB-GENE-021210-3]
14. nkx2.3 ENSDARG00000039095, ENSDARG00000113490 493 1.703 0.990 - - - - 0.713 - - - NK2 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-178]
15. HNRNPH3 ENSDARG00000039466, ENSDARG00000113164, ENSDARG00000114248 551 1.697 - - - - 0.834 0.863 - - - heterogeneous nuclear ribonucleoprotein H3 (2H9) [Source:ZFIN;Acc:ZDB-GENE-060421-3878]
16. msxa msxa 263 1.69 - - - - - 0.971 0.719 - -
17. thtpa ENSDARG00000063049 286 1.678 0.973 - - - - - 0.705 - - thiamine triphosphatase [Source:ZFIN;Acc:ZDB-GENE-070502-2]
18. rdh5 ENSDARG00000008306 272 1.671 - - - - - 0.960 0.711 - - retinol dehydrogenase 5 (11-cis/9-cis) [Source:ZFIN;Acc:ZDB-GENE-050208-411]
19. gorab ENSDARG00000042031 483 1.665 0.894 - - - - 0.771 - - - golgin, rab6-interacting [Source:ZFIN;Acc:ZDB-GENE-040426-1384]
20. rpp40 ENSDARG00000017605 63 1.645 - - - - - 0.940 0.705 - - ribonuclease P/MRP 40 subunit [Source:ZFIN;Acc:ZDB-GENE-040625-161]
21. ly75 ENSDARG00000053113 196 1.645 0.928 - - - - 0.717 - - - lymphocyte antigen 75 [Source:ZFIN;Acc:ZDB-GENE-050309-166]
22. rin1a ENSDARG00000079095 99 1.631 - - - - - 0.890 0.741 - - Ras and Rab interactor 1a [Source:ZFIN;Acc:ZDB-GENE-091204-129]
23. sla1 ENSDARG00000054340 95 1.627 0.905 - - - - 0.722 - - - Src-like-adaptor 1 [Source:ZFIN;Acc:ZDB-GENE-050904-3]
24. mkln1 ENSDARG00000025576 1122 1.611 0.889 - - - - - 0.722 - - muskelin 1, intracellular mediator containing kelch motifs [Source:ZFIN;Acc:ZDB-GENE-030131-3942]
25. ppp1r14ba ENSDARG00000044541 792 1.605 - - - - - 0.841 0.764 - - protein phosphatase 1, regulatory (inhibitor) subunit 14Ba [Source:ZFIN;Acc:ZDB-GENE-060825-331]
26. zgc:162232 zgc:162232 251 1.603 - - - - 0.835 0.768 - - -
27. prpf18 ENSDARG00000058306, ENSDARG00000113879 512 1.597 0.722 - - - - - 0.875 - - PRP18 pre-mRNA processing factor 18 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040704-45]
28. ndst2a ENSDARG00000086269 754 1.596 0.804 - - - - 0.792 - - - N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2a [Source:ZFIN;Acc:ZDB-GENE-060810-182]
29. dolpp1 ENSDARG00000036915 114 1.574 - - - - - 0.853 - 0.721 - dolichyldiphosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-041024-11]
30. CABZ01058646.1 CABZ01058646.1 205 1.554 0.800 - - - - - 0.754 - -
31. EMILIN3 1347 1.535 0.793 - - - - - 0.742 - - elastin microfibril interfacer 3
32. rasa4 ENSDARG00000029372 295 1.531 0.782 - - - - 0.749 - - - RAS p21 protein activator 4 [Source:ZFIN;Acc:ZDB-GENE-060526-349]
33. fam222bb ENSDARG00000078578 779 1.512 0.761 - - - - - 0.751 - - family with sequence similarity 222, member Bb [Source:ZFIN;Acc:ZDB-GENE-110419-4]
34. epcam ENSDARG00000040534, ENSDARG00000110073 3322 1.512 - - - - 0.788 0.724 - - - epithelial cell adhesion molecule [Source:ZFIN;Acc:ZDB-GENE-040426-2209]
35. ythdf3 ENSDARG00000057939 475 1.483 - - - - - 0.708 0.775 - - YTH N(6)-methyladenosine RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6123]
36. zgc:113025 zgc:113025 619 1.477 0.750 - - - - - 0.727 - -
37. si:ch73-191k20.4 37 1.454 - - - - 0.738 - 0.716 - - si:ch73-191k20.4, transcript variant X1
38. spopla ENSDARG00000010563 775 1.447 - - - - - 0.725 0.722 - - speckle-type POZ protein-like a [Source:ZFIN;Acc:ZDB-GENE-050320-3]
39. Metazoa_SRP_18 Metazoa_SRP_18 4 1 1.000 - - - - - - - -
40. TULP2 TULP2 38 1 1.000 - - - - - - - -
41. BX908804.1 ENSDARG00000002797 4 1 1.000 - - - - - - - -
42. trnau1apa ENSDARG00000101323 911 1 - 1.000 - - - - - - - tRNA selenocysteine 1 associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-050522-502]
43. ahsa1l ahsa1l 2366 1 - 1.000 - - - - - - -
44. si:dkey-13n15.2 ENSDARG00000061806, ENSDARG00000094417 4 1 1.000 - - - - - - - - si:dkey-13n15.2 [Source:ZFIN;Acc:ZDB-GENE-060526-209]
45. thbs4a ENSDARG00000102777 625 1 - 1.000 - - - - - - - thrombospondin 4a [Source:ZFIN;Acc:ZDB-GENE-080215-11]
46. si:dkey-197d18.1 si:dkey-197d18.1 4 1 1.000 - - - - - - - -
47. CR848761.1 CR848761.1 4 1 1.000 - - - - - - - -
48. CAPN1_1 ENSDARG00000055338 288 1 - 1.000 - - - - - - - calpain 1 [Source:HGNC Symbol;Acc:HGNC:1476]
49. si:dkey-199f5.6 ENSDARG00000094400 51 1 1.000 - - - - - - - - si:dkey-199f5.6 [Source:ZFIN;Acc:ZDB-GENE-100922-107]
50. prune2 ENSDARG00000059423, ENSDARG00000116519 646 1 - 1.000 - - - - - - - prune homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050309-222]
51. angptl3 ENSDARG00000044365 574 1 - 1.000 - - - - - - - angiopoietin-like 3 [Source:ZFIN;Acc:ZDB-GENE-010817-3]
52. GPR180 73 1 1.000 - - - - - - - - G protein-coupled receptor 180, transcript variant X2
53. si:ch211-76m11.15 ENSDARG00000098979 6 1 1.000 - - - - - - - - si:ch211-76m11.15 [Source:ZFIN;Acc:ZDB-GENE-110411-136]
54. WDR81 ENSDARG00000079702 822 1 - 1.000 - - - - - - - WD repeat domain 81 [Source:ZFIN;Acc:ZDB-GENE-030131-3389]
55. cyp2x6 ENSDARG00000079653, ENSDARG00000111425 33 1 1.000 - - - - - - - - cytochrome P450, family 2, subfamily X, polypeptide 6 [Source:ZFIN;Acc:ZDB-GENE-050320-144]
56. spdya ENSDARG00000059131 33 1 - - - - - 1.000 - - - speedy/RINGO cell cycle regulator family member A [Source:ZFIN;Acc:ZDB-GENE-041010-194]
57. slc24a4b ENSDARG00000067509 33 1 1.000 - - - - - - - - solute carrier family 24 (sodium/potassium/calcium exchanger), member 4b [Source:ZFIN;Acc:ZDB-GENE-081031-75]
58. wu:fi42e03 ENSDARG00000070709 276 1 - 1.000 - - - - - - - wu:fi42e03 [Source:ZFIN;Acc:ZDB-GENE-030131-6284]
59. STARD4 ENSDARG00000102477 411 1 - 1.000 - - - - - - - StAR-related lipid transfer (START) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-050417-168]
60. sntg2 ENSDARG00000101660 19 1 1.000 - - - - - - - - syntrophin, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-060526-196]
61. prosc 925 1 - 1.000 - - - - - - - pyridoxal phosphate binding protein, transcript variant X1
62. si:ch211-67f13.7 ENSDARG00000077845 8 1 1.000 - - - - - - - - si:ch211-67f13.7 [Source:ZFIN;Acc:ZDB-GENE-090313-126]
63. fam101a 4 1 1.000 - - - - - - - - family with sequence similarity 101, member A
64. PRKCA_1 ENSDARG00000099841 12 1 1.000 - - - - - - - - protein kinase C alpha [Source:HGNC Symbol;Acc:HGNC:9393]
65. olig4 ENSDARG00000052610, ENSDARG00000116678 1704 1 - 1.000 - - - - - - - oligodendrocyte transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-3580]
66. ZNF337_17 ZNF337_17 12 1 1.000 - - - - - - - -
67. eya2 ENSDARG00000018984 1768 1 - 1.000 - - - - - - - EYA transcriptional coactivator and phosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-040912-24]
68. CR381673.1 ENSDARG00000098337 7 1 1.000 - - - - - - - -
69. lipt2 ENSDARG00000069852 14 1 1.000 - - - - - - - - lipoyl(octanoyl) transferase 2 [Source:ZFIN;Acc:ZDB-GENE-060312-18]
70. CREB3L3 CREB3L3 24 1 1.000 - - - - - - - -
71. RAB38 122 1 1.000 - - - - - - - - RAB38, member RAS oncogene family
72. emx3 ENSDARG00000020417 85 1 1.000 - - - - - - - - empty spiracles homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-53]
73. shda ENSDARG00000094243 929 1 - 1.000 - - - - - - - Src homology 2 domain containing transforming protein D, a [Source:ZFIN;Acc:ZDB-GENE-070912-58]
74. zgc:173837 ENSDARG00000076949 24 1 1.000 - - - - - - - - zgc:173837 [Source:ZFIN;Acc:ZDB-GENE-080213-12]
75. si:ch73-138i16.1 ENSDARG00000095562 8 1 1.000 - - - - - - - - si:ch73-138i16.1 [Source:ZFIN;Acc:ZDB-GENE-070705-208]
76. igsf5 igsf5 85 1 1.000 - - - - - - - -
77. esrrga ENSDARG00000004861 805 1 - 1.000 - - - - - - - estrogen-related receptor gamma a [Source:ZFIN;Acc:ZDB-GENE-030821-2]
78. CT573256.1 ENSDARG00000091657 18 1 1.000 - - - - - - - - serine/threonine-protein kinase VRK1-like [Source:NCBI gene;Acc:794952]
79. CU929356.4 CU929356.4 86 1 1.000 - - - - - - - -
80. fasn_1 ENSDARG00000087657 31 1 1.000 - - - - - - - - fatty acid synthase [Source:ZFIN;Acc:ZDB-GENE-030131-7802]
81. MUC5AC MUC5AC 32 1 1.000 - - - - - - - -
82. AL928712.1 AL928712.1 101 1 1.000 - - - - - - - -
83. SNORD38 SNORD38 171 1 1.000 - - - - - - - -
84. si:ch211-242f23.8 ENSDARG00000087585 22 1 1.000 - - - - - - - - si:ch211-242f23.8 [Source:ZFIN;Acc:ZDB-GENE-091204-11]
85. crybb3 ENSDARG00000041301 48 1 1.000 - - - - - - - - crystallin, beta B3 [Source:ZFIN;Acc:ZDB-GENE-060130-2]
86. nkain1 ENSDARG00000006859 1961 1 - 1.000 - - - - - - - sodium/potassium transporting ATPase interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1472]
87. dao.3 ENSDARG00000035601 15 1 1.000 - - - - - - - - D-amino-acid oxidase, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1894]
88. ctage5 530 0.999 - 0.999 - - - - - - - CTAGE family, member 5, transcript variant X8
89. zgc:111974 zgc:111974 1386 0.999 - 0.999 - - - - - - -
90. gfap ENSDARG00000025301 5584 0.999 - 0.999 - - - - - - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
91. xylt1 ENSDARG00000061248 2357 0.999 - 0.999 - - - - - - - xylosyltransferase I [Source:ZFIN;Acc:ZDB-GENE-111017-2]
92. galns ENSDARG00000051853, ENSDARG00000113387 347 0.999 - 0.999 - - - - - - - galactosamine (N-acetyl)-6-sulfatase [Source:ZFIN;Acc:ZDB-GENE-070112-1152]
93. gpd1c ENSDARG00000036942 869 0.999 - 0.999 - - - - - - - glycerol-3-phosphate dehydrogenase 1c [Source:ZFIN;Acc:ZDB-GENE-040426-2576]
94. ccsapb ENSDARG00000040085 784 0.999 - 0.999 - - - - - - - centriole, cilia and spindle-associated protein b [Source:ZFIN;Acc:ZDB-GENE-081107-51]
95. MTMR11 ENSDARG00000069755 917 0.999 - 0.999 - - - - - - - myotubularin related protein 11 [Source:ZFIN;Acc:ZDB-GENE-130530-726]
96. CABZ01079490.1 CABZ01079490.1 1808 0.999 - 0.999 - - - - - - -
97. dyrk1ab ENSDARG00000023814 1769 0.999 - 0.999 - - - - - - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A, b [Source:ZFIN;Acc:ZDB-GENE-030131-5677]
98. ddx42 ENSDARG00000037928 1659 0.999 - 0.999 - - - - - - - DEAD (Asp-Glu-Ala-Asp) box helicase 42 [Source:ZFIN;Acc:ZDB-GENE-050706-53]
99. ppfibp2b ENSDARG00000029168 961 0.999 - 0.999 - - - - - - - PTPRF interacting protein, binding protein 2b (liprin beta 2) [Source:ZFIN;Acc:ZDB-GENE-040718-54]
100. snx27b ENSDARG00000016977 2768 0.999 - 0.999 - - - - - - - sorting nexin family member 27b [Source:ZFIN;Acc:ZDB-GENE-040426-1529]

There are 1202 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA