Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-240l19.5

Gene Name Gene ID Reads Annotation
si:ch211-240l19.5 ENSDARG00000039393, ENSDARG00000117050 23 si:ch211-240l19.5 [Source:ZFIN;Acc:ZDB-GENE-041210-327]










Genes with expression patterns similar to si:ch211-240l19.5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-240l19.5 ENSDARG00000039393, ENSDARG00000117050 23 5 - - 1.000 1.000 1.000 - - 1.000 1.000 si:ch211-240l19.5 [Source:ZFIN;Acc:ZDB-GENE-041210-327]
2. dazl ENSDARG00000036214 11 1.794 - - - 0.817 0.977 - - - - deleted in azoospermia-like [Source:ZFIN;Acc:ZDB-GENE-000405-6]
3. si:dkey-25o1.7 ENSDARG00000093570, ENSDARG00000100520, ENSDARG00000111049, ENSDARG00000112319 13 1.769 - - - 1.000 0.769 - - - - si:dkey-25o1.7 [Source:ZFIN;Acc:ZDB-GENE-091204-375]
4. opn5 ENSDARG00000070110 18 1 - - - 1.000 - - - - - opsin 5 [Source:ZFIN;Acc:ZDB-GENE-041001-179]
5. CR936465.1 CR936465.1 7 1 - - - 1.000 - - - - -
6. Metazoa_SRP_17 Metazoa_SRP_17 1 1 - - - 1.000 - - - - -
7. CU855821.2 CU855821.2 21 1 - - - 1.000 - - - - -
8. zgc:101553 zgc:101553 1 1 - - - 1.000 - - - - -
9. CU929143.1 ENSDARG00000099967 1 1 - - - 1.000 - - - - -
10. SAMD9L SAMD9L 10 1 - - - 1.000 - - - - -
11. ENSDARG00000089165 ENSDARG00000089165 1 1 - - - 1.000 - - - - -
12. asz1 ENSDARG00000004823, ENSDARG00000116151 8 1 - - - - 1.000 - - - - ankyrin repeat, SAM and basic leucine zipper domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-988]
13. or109-1 ENSDARG00000105796 1 1 - - - 1.000 - - - - - odorant receptor, family D, subfamily 109, member 1 [Source:ZFIN;Acc:ZDB-GENE-070806-67]
14. cdca9 ENSDARG00000088639, ENSDARG00000113114 3 1 - - - 1.000 - - - - - cell division cycle associated 9 [Source:ZFIN;Acc:ZDB-GENE-090706-4]
15. dmrt1 ENSDARG00000007349 16 1 - - - 1.000 - - - - - doublesex and mab-3 related transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050511-1]
16. si:ch211-239f4.6 ENSDARG00000093347 2 1 - - - 1.000 - - - - - si:ch211-239f4.6 [Source:ZFIN;Acc:ZDB-GENE-061009-18]
17. FAM185A ENSDARG00000019142 3 1 - - - 1.000 - - - - - family with sequence similarity 185, member A [Source:ZFIN;Acc:ZDB-GENE-131121-241]
18. si:dkey-152b24.6 ENSDARG00000105043 39 1 - - - 1.000 - - - - - si:dkey-152b24.6 [Source:ZFIN;Acc:ZDB-GENE-100922-31]
19. Metazoa_SRP_24 Metazoa_SRP_24 4 1 - - - 1.000 - - - - -
20. ttr ENSDARG00000037191 11 1 - - - 1.000 - - - - - transthyretin (prealbumin, amyloidosis type I) [Source:ZFIN;Acc:ZDB-GENE-040927-14]
21. clcf1 ENSDARG00000076140 5 1 - - - 1.000 - - - - - cardiotrophin-like cytokine factor 1 [Source:ZFIN;Acc:ZDB-GENE-110411-244]
22. SH3TC1 ENSDARG00000077330 8 1 - - - 1.000 - - - - - SH3 domain and tetratricopeptide repeats 1 [Source:HGNC Symbol;Acc:HGNC:26009]
23. si:dkey-105h11.2 13 1 - - - 1.000 - - - - - si:dkey-105h11.2
24. ENSDARG00000089797 ENSDARG00000089797 50 1 - - - 1.000 - - - - -
25. si:ch211-196c10.5 si:ch211-196c10.5 3 1 - - - 1.000 - - - - -
26. CU075911.1 CU075911.1 2 1 - - - 1.000 - - - - -
27. med8 ENSDARG00000114425 7 1 - - - - 1.000 - - - - mediator complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2091]
28. plekha7b ENSDARG00000062220, ENSDARG00000110462 11 0.986 - - - 0.986 - - - - - pleckstrin homology domain containing, family A member 7b [Source:ZFIN;Acc:ZDB-GENE-091014-2]
29. gyg2 ENSDARG00000033380 12 0.986 - - - 0.986 - - - - - glycogenin 2 [Source:ZFIN;Acc:ZDB-GENE-080723-74]
30. CABZ01028403.3 CABZ01028403.3 4 0.986 - - - 0.986 - - - - -
31. si:ch211-71m22.2 si:ch211-71m22.2 11 0.986 - - - 0.986 - - - - -
32. AL807829.1 AL807829.1 2 0.983 - - - 0.983 - - - - -
33. wnt2ba ENSDARG00000005050 11 0.98 - - - 0.980 - - - - - wingless-type MMTV integration site family, member 2Ba [Source:ZFIN;Acc:ZDB-GENE-030717-2]
34. fstl4 ENSDARG00000044319 1 0.977 - - - - 0.977 - - - - follistatin-like 4 [Source:ZFIN;Acc:ZDB-GENE-070127-3]
35. si:dkey-206m15.8 16 0.977 - - - - 0.977 - - - - si:dkey-206m15.8
36. hs3st2 ENSDARG00000059616 2 0.977 - - - - 0.977 - - - - heparan sulfate (glucosamine) 3-O-sulfotransferase 2 [Source:ZFIN;Acc:ZDB-GENE-070202-7]
37. si:dkey-11e23.3 si:dkey-11e23.3 3 0.977 - - - - 0.977 - - - -
38. mxa ENSDARG00000021688 14 0.977 - - - - 0.977 - - - - myxovirus (influenza) resistance A [Source:ZFIN;Acc:ZDB-GENE-030721-5]
39. si:ch211-207c6.4 si:ch211-207c6.4 7 0.977 - - - - 0.977 - - - -
40. SNORD18_2 SNORD18_2 7 0.977 - - - - 0.977 - - - -
41. map3k12 ENSDARG00000103651 3 0.977 - - - - 0.977 - - - - mitogen-activated protein kinase kinase kinase 12 [Source:ZFIN;Acc:ZDB-GENE-040426-2436]
42. grm1a ENSDARG00000026796 9 0.977 - - - - 0.977 - - - - glutamate receptor, metabotropic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7893]
43. CABZ01112215.2 CABZ01112215.2 11 0.977 - - - - 0.977 - - - -
44. ASCC3_1 ASCC3_1 1 0.977 - - - - 0.977 - - - -
45. MSRA ENSDARG00000029587 30 0.977 - - - - 0.977 - - - - methionine sulfoxide reductase A [Source:ZFIN;Acc:ZDB-GENE-041014-344]
46. CR376787.3 CR376787.3 11 0.977 - - - 0.977 - - - - -
47. FHL5 ENSDARG00000014805 3 0.977 - - - - 0.977 - - - - four and a half LIM domains 5 [Source:ZFIN;Acc:ZDB-GENE-040822-3]
48. zgc:194686 ENSDARG00000076388 1 0.977 - - - - 0.977 - - - - zgc:194686 [Source:ZFIN;Acc:ZDB-GENE-080721-26]
49. zgc:112399 1 0.977 - - - - 0.977 - - - - zgc:112399
50. mxtx2 ENSDARG00000015906, ENSDARG00000114636 1 0.977 - - - - 0.977 - - - - mix-type homeobox gene 2 [Source:ZFIN;Acc:ZDB-GENE-000710-6]
51. EFEMP1_1 EFEMP1_1 8 0.977 - - - - 0.977 - - - -
52. adcyap1a ENSDARG00000004015 67 0.977 - - - - 0.977 - - - - adenylate cyclase activating polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-020809-4]
53. si:ch211-214j24.15 ENSDARG00000063481 8 0.977 - - - - 0.977 - - - - si:ch211-214j24.15 [Source:ZFIN;Acc:ZDB-GENE-110914-85]
54. si:ch211-222b21.5 si:ch211-222b21.5 10 0.977 - - - - 0.977 - - - -
55. CHST7 ENSDARG00000044341 3 0.977 - - - - 0.977 - - - - carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7 [Source:ZFIN;Acc:ZDB-GENE-131121-150]
56. PGF PGF 3 0.977 - - - - 0.977 - - - -
57. BX322792.1 ENSDARG00000117506 1 0.977 - - - - 0.977 - - - - uncharacterized LOC110439912 [Source:NCBI gene;Acc:110439912]
58. si:dkeyp-82a1.2 ENSDARG00000094192 2 0.977 - - - - 0.977 - - - - si:dkeyp-82a1.2 [Source:ZFIN;Acc:ZDB-GENE-081104-475]
59. prdm11 ENSDARG00000074468 2 0.977 - - - - 0.977 - - - - PR domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-061221-1]
60. GPR132 GPR132 1 0.977 - - - - 0.977 - - - -
61. GBA3 ENSDARG00000031150 1 0.977 - - - - 0.977 - - - - glucosidase, beta, acid 3 (gene/pseudogene) [Source:ZFIN;Acc:ZDB-GENE-050522-351]
62. si:dkeyp-92c5.2 si:dkeyp-92c5.2 1 0.977 - - - - 0.977 - - - -
63. PFKFB1 ENSDARG00000037140 5 0.977 - - - - 0.977 - - - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5664]
64. BX005294.4 BX005294.4 8 0.977 - - - - 0.977 - - - -
65. UIMC1 200 0.971 - - - - - - - - 0.971 ubiquitin interaction motif containing 1
66. cdh4_1 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 13 0.969 - - - 0.969 - - - - - cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]
67. arhgef9a ENSDARG00000061746 58 0.966 - - - - 0.966 - - - - Cdc42 guanine nucleotide exchange factor (GEF) 9a [Source:ZFIN;Acc:ZDB-GENE-070705-271]
68. si:dkey-234l24.9 si:dkey-234l24.9 8 0.966 - - - - 0.966 - - - -
69. si:ch73-343l4.8 ENSDARG00000077975 4 0.966 - - - - 0.966 - - - - si:ch73-343l4.8 [Source:ZFIN;Acc:ZDB-GENE-090313-159]
70. pax7a ENSDARG00000100398, ENSDARG00000111233 37 0.965 - - - 0.965 - - - - - paired box 7a [Source:ZFIN;Acc:ZDB-GENE-990415-201]
71. zgc:153345 ENSDARG00000055622 29 0.963 - - - - 0.963 - - - - zgc:153345 [Source:ZFIN;Acc:ZDB-GENE-061103-487]
72. chrna4 chrna4 3 0.957 - - - - 0.957 - - - -
73. havcr1 ENSDARG00000040178 73 0.951 - - - - 0.951 - - - - hepatitis A virus cellular receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040718-131]
74. PTGR1 ENSDARG00000024877, ENSDARG00000115676 6 0.937 - - - 0.937 - - - - - prostaglandin reductase 1 [Source:ZFIN;Acc:ZDB-GENE-041212-80]
75. si:ch211-113a14.26_3 6 0.936 - - - - 0.936 - - - - si:ch211-113a14.26
76. nabp1b ENSDARG00000043685 5 0.936 - - - - 0.936 - - - - nucleic acid binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-050913-74]
77. irf3 ENSDARG00000076251 8 0.936 - - - - 0.936 - - - - interferon regulatory factor 3 [Source:ZFIN;Acc:ZDB-GENE-071120-7]
78. tet1 ENSDARG00000075230, ENSDARG00000110764 8 0.936 - - - - 0.936 - - - - tet methylcytosine dioxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-090312-88]
79. zgc:171844 ENSDARG00000067813 30 0.935 - - - 0.935 - - - - - zgc:171844 [Source:ZFIN;Acc:ZDB-GENE-080516-8]
80. eif2b5 ENSDARG00000074995 8 0.928 - - - - 0.928 - - - - eukaryotic translation initiation factor 2B, subunit 5 epsilon [Source:ZFIN;Acc:ZDB-GENE-030131-5364]
81. sybu ENSDARG00000060112 22 0.928 - - - 0.928 - - - - - syntabulin (syntaxin-interacting) [Source:ZFIN;Acc:ZDB-GENE-060929-1202]
82. ano6 ENSDARG00000061544 21 0.919 - - - 0.919 - - - - - anoctamin 6 [Source:ZFIN;Acc:ZDB-GENE-081104-64]
83. cldn15lb ENSDARG00000100844 46 0.906 - - - 0.906 - - - - - claudin 15-like b [Source:ZFIN;Acc:ZDB-GENE-040718-145]
84. AL935181.2 AL935181.2 9 0.901 - - - - 0.901 - - - -
85. oca2 ENSDARG00000061303 22 0.901 - - - 0.901 - - - - - oculocutaneous albinism II [Source:ZFIN;Acc:ZDB-GENE-070718-4]
86. traf7 ENSDARG00000060207 20 0.899 - - - - 0.899 - - - - TNF receptor-associated factor 7 [Source:ZFIN;Acc:ZDB-GENE-070112-2212]
87. cyp2n13 ENSDARG00000042953 10 0.895 - - - 0.895 - - - - - cytochrome P450, family 2, subfamily N, polypeptide 13 [Source:ZFIN;Acc:ZDB-GENE-041001-158]
88. ppm1f ENSDARG00000005786, ENSDARG00000109839 25 0.892 - - - - 0.892 - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]
89. si:ch211-157j23.2 ENSDARG00000061221, ENSDARG00000095245 9 0.891 - - - 0.891 - - - - - si:ch211-157j23.2 [Source:ZFIN;Acc:ZDB-GENE-030131-5686]
90. pde4d ENSDARG00000032761 8 0.89 - - - - 0.890 - - - - phosphodiesterase 4D, cAMP-specific [Source:ZFIN;Acc:ZDB-GENE-081105-16]
91. CR631122.1 ENSDARG00000044534 8 0.89 - - - - 0.890 - - - - protein RD3-like [Source:NCBI gene;Acc:100149591]
92. C1S_1 C1S_1 11 0.89 - - - - 0.890 - - - -
93. si:dkey-14i17.2 si:dkey-14i17.2 10 0.886 - - - - 0.886 - - - -
94. TRIM14_10 TRIM14_10 9 0.884 - - - 0.884 - - - - -
95. TRIM14_8 TRIM14_8 5 0.881 - - - - 0.881 - - - -
96. kcnh6 kcnh6 59 0.881 - - - - 0.881 - - - -
97. cga ENSDARG00000040479 3 0.881 - - - - 0.881 - - - - glycoprotein hormones, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-040715-2]
98. RAB21 ENSDARG00000100752 15 0.881 - - - - 0.881 - - - - RAB21, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18263]
99. cdk20 ENSDARG00000003867 27 0.88 - - - - 0.880 - - - - cyclin-dependent kinase 20 [Source:ZFIN;Acc:ZDB-GENE-041212-84]
100. si:dkey-16p19.8 ENSDARG00000096481 6 0.879 - - - - 0.879 - - - - si:dkey-16p19.8 [Source:ZFIN;Acc:ZDB-GENE-120709-67]

There are 144 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA