Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-222k6.3

Gene Name Gene ID Reads Annotation
si:ch211-222k6.3 ENSDARG00000071578 127 si:ch211-222k6.3 [Source:ZFIN;Acc:ZDB-GENE-050208-567]










Genes with expression patterns similar to si:ch211-222k6.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-222k6.3 ENSDARG00000071578 127 7 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 - si:ch211-222k6.3 [Source:ZFIN;Acc:ZDB-GENE-050208-567]
2. CR925758.1 CR925758.1 83 1.872 0.917 0.955 - - - - - - -
3. mirlet7a-6 15 1.851 0.990 - - - - - 0.861 - - microRNA let7a-6
4. si:dkey-14o18.1 si:dkey-14o18.1 108 1.833 - - 0.833 1.000 - - - - -
5. PACRG ENSDARG00000087556 7 1.83 - - - 1.000 - - 0.830 - - PARK2 co-regulated [Source:ZFIN;Acc:ZDB-GENE-041114-100]
6. lrrc9 ENSDARG00000054352 25 1.827 - - 0.827 1.000 - - - - - leucine rich repeat containing 9 [Source:ZFIN;Acc:ZDB-GENE-080917-56]
7. mir30b 4 1.826 - - - 1.000 - - 0.826 - - microRNA 30b
8. BX324198.1 BX324198.1 12 1.826 - - - 1.000 - - 0.826 - -
9. lrp6 ENSDARG00000100143 1 1.826 - - - 1.000 - - 0.826 - - low density lipoprotein receptor-related protein 6 [Source:ZFIN;Acc:ZDB-GENE-090821-1]
10. si:dkey-11f4.20 ENSDARG00000100887 38 1.786 - - - 1.000 - 0.786 - - - si:dkey-11f4.20 [Source:ZFIN;Acc:ZDB-GENE-070912-359]
11. b3gnt3.4 ENSDARG00000058100 117 1.746 - 0.908 - - - - 0.838 - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3, tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-030131-8875]
12. elavl2 ENSDARG00000040732 44 1.745 - 0.915 - - - - 0.830 - - ELAV like neuron-specific RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040704-9]
13. si:dkey-173l11.3 si:dkey-173l11.3 14 1.741 - 0.915 - - - - 0.826 - -
14. dand5 ENSDARG00000036471 8 1.738 - - - 0.912 - - 0.826 - - DAN domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040421-2]
15. entpd2a.1 ENSDARG00000035506 14 1.736 - - - 1.000 - - 0.736 - - ectonucleoside triphosphate diphosphohydrolase 2a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040724-187]
16. GPR97 GPR97 9 1.733 - 0.915 - - - 0.818 - - -
17. ssrp1b ENSDARG00000016994 58 1.726 0.971 - - - - 0.755 - - - structure specific recognition protein 1b [Source:ZFIN;Acc:ZDB-GENE-041008-209]
18. mfsd4a mfsd4a 179 1.724 0.990 - - - - - 0.734 - -
19. si:ch211-226h8.14 ENSDARG00000088713, ENSDARG00000116143 75 1.7 - - 0.839 - - - 0.861 - - si:ch211-226h8.14 [Source:ZFIN;Acc:ZDB-GENE-050208-470]
20. CCDC132 CCDC132 267 1.697 0.879 0.818 - - - - - - -
21. TNFRSF11B ENSDARG00000098377 98 1.694 - 0.889 - - - - 0.805 - - tumor necrosis factor receptor superfamily, member 11b [Source:ZFIN;Acc:ZDB-GENE-081104-76]
22. slc27a6 ENSDARG00000046053 57 1.684 0.919 - - - - 0.765 - - - solute carrier family 27 (fatty acid transporter), member 6 [Source:ZFIN;Acc:ZDB-GENE-060825-27]
23. tmem168a ENSDARG00000068705 498 1.679 0.803 0.876 - - - - - - - transmembrane protein 168a [Source:ZFIN;Acc:ZDB-GENE-050419-97]
24. si:dkey-10g2.5 si:dkey-10g2.5 72 1.653 - 0.859 - - - 0.794 - - -
25. fpr1 ENSDARG00000042984 66 1.651 0.901 - - - - 0.750 - - - formyl peptide receptor 1 [Source:ZFIN;Acc:ZDB-GENE-121227-2]
26. si:ch211-127i16.2 ENSDARG00000092976, ENSDARG00000116049 152 1.65 0.925 0.725 - - - - - - - si:ch211-127i16.2 [Source:ZFIN;Acc:ZDB-GENE-091204-54]
27. si:dkey-176f19.7 ENSDARG00000103348 10 1.648 - - 0.822 - - - 0.826 - - si:dkey-176f19.7 [Source:ZFIN;Acc:ZDB-GENE-110913-130]
28. wu:fc28f08 wu:fc28f08 188 1.633 0.894 - 0.739 - - - - - -
29. sfrp5 ENSDARG00000039041 1777 1.629 0.880 0.749 - - - - - - - secreted frizzled-related protein 5 [Source:ZFIN;Acc:ZDB-GENE-011108-2]
30. wdyhv1 ENSDARG00000070403 42 1.627 - 0.912 - - - - 0.715 - - WDYHV motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-848]
31. kat6a ENSDARG00000018907 250 1.624 - 0.858 - - - 0.766 - - - K(lysine) acetyltransferase 6A [Source:ZFIN;Acc:ZDB-GENE-021022-3]
32. mapre1a ENSDARG00000042927 164 1.614 - 0.817 - - - 0.797 - - - microtubule-associated protein, RP/EB family, member 1a [Source:ZFIN;Acc:ZDB-GENE-030131-6067]
33. slc6a6a ENSDARG00000012534 183 1.612 0.889 - - - - 0.723 - - - solute carrier family 6 (neurotransmitter transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-081104-1]
34. egfl7 ENSDARG00000100657 776 1.602 - - 0.749 - - - 0.853 - - EGF-like-domain, multiple 7 [Source:ZFIN;Acc:ZDB-GENE-040429-2]
35. si:dkey-82i20.2 ENSDARG00000095126, ENSDARG00000100509 155 1.594 0.790 0.804 - - - - - - - si:dkey-82i20.2 [Source:ZFIN;Acc:ZDB-GENE-110914-74]
36. WAPAL_1 WAPAL_1 205 1.593 0.834 - - - - 0.759 - - -
37. 5_8S_rRNA 5_8S_rRNA 24 1.591 - - - - - 0.765 0.826 - -
38. neurod6b ENSDARG00000020794 164 1.591 - - - - - 0.765 0.826 - - neuronal differentiation 6b [Source:ZFIN;Acc:ZDB-GENE-010608-2]
39. trpc2 trpc2 10 1.591 - - - - - 0.765 0.826 - -
40. bmp7a ENSDARG00000018260 92 1.588 0.742 0.846 - - - - - - - bone morphogenetic protein 7a [Source:ZFIN;Acc:ZDB-GENE-000208-25]
41. CR790363.1 ENSDARG00000097364 145 1.583 - 0.818 - - - 0.765 - - -
42. zgc:153911 ENSDARG00000002509 110 1.573 0.795 0.778 - - - - - - - zgc:153911 [Source:ZFIN;Acc:ZDB-GENE-061013-174]
43. rcan2 ENSDARG00000021869 874 1.572 0.858 0.714 - - - - - - - regulator of calcineurin 2 [Source:ZFIN;Acc:ZDB-GENE-040516-17]
44. si:dkey-9i23.6 ENSDARG00000094678 58 1.572 - 0.807 - - - 0.765 - - - si:dkey-9i23.6 [Source:ZFIN;Acc:ZDB-GENE-090313-365]
45. CR848836.5 CR848836.5 42 1.559 - - - - - 0.853 0.706 - -
46. pvrl4 155 1.554 0.728 - - - - - 0.826 - - poliovirus receptor-related 4
47. sod1 ENSDARG00000043848 1514 1.533 - 0.827 - - - 0.706 - - - superoxide dismutase 1, soluble [Source:ZFIN;Acc:ZDB-GENE-990415-258]
48. BX323449.2 BX323449.2 50 1.529 - - 0.796 - - - - 0.733 -
49. si:dkey-104n9.1 ENSDARG00000093042 41 1.529 - - 0.703 - - - 0.826 - - si:dkey-104n9.1 [Source:ZFIN;Acc:ZDB-GENE-081104-300]
50. trpm4 trpm4 501 1.512 0.716 - - - - 0.796 - - -
51. MDFIC ENSDARG00000074223 781 1.512 - 0.809 - - - 0.703 - - - MyoD family inhibitor domain containing [Source:HGNC Symbol;Acc:HGNC:28870]
52. rpn2 ENSDARG00000009724 322 1.511 - - 0.746 - - 0.765 - - - ribophorin II [Source:ZFIN;Acc:ZDB-GENE-030131-7928]
53. dckl1b dckl1b 115 1.504 0.735 - - - - 0.769 - - -
54. zgc:86896 ENSDARG00000090369 839 1.503 - 0.714 0.789 - - - - - - zgc:86896 [Source:ZFIN;Acc:ZDB-GENE-040625-80]
55. fam53b ENSDARG00000016156 2143 1.429 0.728 0.701 - - - - - - - family with sequence similarity 53, member B [Source:ZFIN;Acc:ZDB-GENE-040426-2495]
56. ATP6V1C2 ENSDARG00000070440 2 1 - - - 1.000 - - - - - ATPase H+ transporting V1 subunit C2 [Source:ZFIN;Acc:ZDB-GENE-131127-65]
57. pcdh1a4 0 1 - - - 1.000 - - - - - protocadherin 1 alpha 4
58. gria1b ENSDARG00000032714, ENSDARG00000111658 12 1 - - - 1.000 - - - - - glutamate receptor, ionotropic, AMPA 1b [Source:ZFIN;Acc:ZDB-GENE-020125-2]
59. taar14e ENSDARG00000090372, ENSDARG00000112236 0 1 - - - 1.000 - - - - - trace amine associated receptor 14e [Source:ZFIN;Acc:ZDB-GENE-041210-317]
60. pdha1b ENSDARG00000010555, ENSDARG00000114832 4 1 - - - 1.000 - - - - - pyruvate dehydrogenase E1 alpha 1 subunit b [Source:ZFIN;Acc:ZDB-GENE-040718-96]
61. gpr34b ENSDARG00000002959 0 1 - - - 1.000 - - - - - G protein-coupled receptor 34b [Source:ZFIN;Acc:ZDB-GENE-040823-1]
62. svopa ENSDARG00000056833 14 1 - - - 1.000 - - - - - SV2 related protein a [Source:ZFIN;Acc:ZDB-GENE-060526-336]
63. si:ch211-274k16.4 si:ch211-274k16.4 6 1 - - - 1.000 - - - - -
64. si:ch211-232m19.4 19 1 - - - 1.000 - - - - - si:ch211-232m19.4
65. urgcp ENSDARG00000036767 6 1 - - - 1.000 - - - - - upregulator of cell proliferation [Source:ZFIN;Acc:ZDB-GENE-120215-160]
66. si:dkey-61m24.1 0 1 - - - 1.000 - - - - - si:dkey-61m24.1
67. rpgrip1l ENSDARG00000051754 2 1 - - - 1.000 - - - - - RPGRIP1-like [Source:ZFIN;Acc:ZDB-GENE-081104-81]
68. si:ch211-182e10.4 ENSDARG00000070661, ENSDARG00000070757 1 1 - - - 1.000 - - - - - si:ch211-182e10.4 [Source:ZFIN;Acc:ZDB-GENE-041014-76]
69. cers3b ENSDARG00000036337 1 1 - - - 1.000 - - - - - ceramide synthase 3b [Source:ZFIN;Acc:ZDB-GENE-080220-32]
70. KLHDC8A ENSDARG00000061000 13 1 - - - 1.000 - - - - - kelch domain containing 8A [Source:ZFIN;Acc:ZDB-GENE-120810-3]
71. NWD1 ENSDARG00000076110 3 1 - - - 1.000 - - - - - NACHT and WD repeat domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-071116-8]
72. CABZ01084273.1 CABZ01084273.1 16 1 - - - 1.000 - - - - -
73. CT025771.1 ENSDARG00000117721 13 1 - - - 1.000 - - - - -
74. MAD2L2 ENSDARG00000042456 0 1 - - - 1.000 - - - - - mitotic arrest deficient 2 like 2 [Source:ZFIN;Acc:ZDB-GENE-050417-61]
75. slc17a8 ENSDARG00000057728, ENSDARG00000109791 8 1 - - - 1.000 - - - - - solute carrier family 17 (vesicular glutamate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-060503-416]
76. med8 ENSDARG00000114425 7 1 - - - 1.000 - - - - - mediator complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2091]
77. uts1 ENSDARG00000014927 35 1 - - - 1.000 - - - - - urotensin 1 [Source:ZFIN;Acc:ZDB-GENE-041014-348]
78. srd5a2a ENSDARG00000043587 21 1 - - - 1.000 - - - - - steroid-5-alpha-reductase, alpha polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-050417-199]
79. bcdin3d ENSDARG00000074111 0 1 - - - 1.000 - - - - - BCDIN3 domain containing [Source:ZFIN;Acc:ZDB-GENE-050208-327]
80. bicc2_1 ENSDARG00000076557 6 1 - - - 1.000 - - - - - bicaudal C homolog 2 [Source:ZFIN;Acc:ZDB-GENE-110110-3]
81. CU638737.1 CU638737.1 17 1 - - - 1.000 - - - - -
82. zgc:113425 ENSDARG00000026616 29 1 - - - 1.000 - - - - - zgc:113425 [Source:ZFIN;Acc:ZDB-GENE-050320-128]
83. CENPQ 8 1 - - - 1.000 - - - - - centromere protein Q
84. mespaa ENSDARG00000017078, ENSDARG00000114890 0 1 - - - 1.000 - - - - - mesoderm posterior aa [Source:ZFIN;Acc:ZDB-GENE-000406-8]
85. ENSDARG00000088134 ENSDARG00000088134 16 1 - - - 1.000 - - - - -
86. CABZ01067072.1 CABZ01067072.1 17 1 - - - 1.000 - - - - -
87. snoMBII-202_1 snoMBII-202_1 2 1 - - - 1.000 - - - - -
88. CABZ01067071.1 CABZ01067071.1 0 1 - - - 1.000 - - - - -
89. prph2a ENSDARG00000038018 2 1 - - - 1.000 - - - - - peripherin 2a (retinal degeneration, slow) [Source:ZFIN;Acc:ZDB-GENE-000616-8]
90. AC024175.11 AC024175.11 12 1 - - - 1.000 - - - - -
91. glsa ENSDARG00000062812 1 1 - - - 1.000 - - - - - glutaminase a [Source:ZFIN;Acc:ZDB-GENE-050204-3]
92. si:dkey-19j7.4 si:dkey-19j7.4 1 1 - - - 1.000 - - - - -
93. abcc13 ENSDARG00000062519 2 1 - - - 1.000 - - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 13 [Source:ZFIN;Acc:ZDB-GENE-050517-26]
94. si:dkey-33g13.1 si:dkey-33g13.1 3 1 - - - 1.000 - - - - -
95. wfikkn1 ENSDARG00000101364 11 1 - - - 1.000 - - - - - WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2465]
96. RMI2 ENSDARG00000103137 0 1 - - - 1.000 - - - - - RecQ mediated genome instability 2 [Source:ZFIN;Acc:ZDB-GENE-131125-13]
97. si:ch211-120e1.7 ENSDARG00000094634 14 1 - - - 1.000 - - - - - si:ch211-120e1.7 [Source:ZFIN;Acc:ZDB-GENE-070424-119]
98. si:dkey-34f9.3 ENSDARG00000077813 3 1 - - - 1.000 - - - - - si:dkey-34f9.3 [Source:ZFIN;Acc:ZDB-GENE-081104-410]
99. C1GALT1_1 C1GALT1_1 1 1 - - - 1.000 - - - - -
100. fam196ab 2 1 - - - 1.000 - - - - - family with sequence similarity 196, member Ab

There are 1497 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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