Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for lrrc9

Gene Name Gene ID Reads Annotation
lrrc9 ENSDARG00000054352 25 leucine rich repeat containing 9 [Source:ZFIN;Acc:ZDB-GENE-080917-56]










Genes with expression patterns similar to lrrc9

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lrrc9 ENSDARG00000054352 25 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 leucine rich repeat containing 9 [Source:ZFIN;Acc:ZDB-GENE-080917-56]
2. si:dkey-222f2.3 si:dkey-222f2.3 8 2.686 - - - 1.000 0.879 0.807 - - -
3. ZNF337_8 ZNF337_8 63 2.492 - - - - - 0.946 - 0.742 0.804
4. desi1a ENSDARG00000033140 92 2.271 - 0.734 - - - - 0.754 - 0.783 desumoylating isopeptidase 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1657]
5. si:ch211-120e1.7 ENSDARG00000094634 14 1.989 - - - 1.000 - - - - 0.989 si:ch211-120e1.7 [Source:ZFIN;Acc:ZDB-GENE-070424-119]
6. rhobtb2b ENSDARG00000089340 4 1.947 - - - 1.000 0.947 - - - - Rho related BTB domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-071125-1]
7. fxyd6 ENSDARG00000100971 51 1.899 - 0.953 - - - 0.946 - - - FXYD domain containing ion transport regulator 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5919]
8. si:dkey-14o18.1 si:dkey-14o18.1 108 1.892 - - 0.892 1.000 - - - - -
9. dand5 ENSDARG00000036471 8 1.858 - - - 0.912 - 0.946 - - - DAN domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040421-2]
10. CU183952.1 CU183952.1 32 1.856 - - - - - 0.962 - - 0.894
11. klf5b ENSDARG00000062106 7 1.83 - - - 1.000 0.830 - - - - Kruppel-like factor 5b [Source:ZFIN;Acc:ZDB-GENE-080424-4]
12. si:ch211-222k6.3 ENSDARG00000071578 127 1.827 - - 0.827 1.000 - - - - - si:ch211-222k6.3 [Source:ZFIN;Acc:ZDB-GENE-050208-567]
13. CREB3L3 CREB3L3 24 1.808 - - - - 0.862 0.946 - - -
14. vrk2 ENSDARG00000021547 45 1.801 - - - - - 0.899 - - 0.902 vaccinia related kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1046]
15. 5S_rRNA_22 5S_rRNA_22 45 1.735 - - - - - 0.854 0.881 - -
16. ADM ADM 122 1.729 - - - - - 0.946 - - 0.783
17. tctn2 ENSDARG00000035633 84 1.712 - - - - - - 0.886 - 0.826 tectonic family member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-751]
18. crygn1 ENSDARG00000102129 23 1.71 - - - - - 0.766 0.944 - - crystallin, gamma N1 [Source:ZFIN;Acc:ZDB-GENE-050225-1]
19. slc9a3.1 ENSDARG00000058498 46 1.699 - - - - - 0.792 - - 0.907 solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-060503-545]
20. zgc:158417 ENSDARG00000101671 46 1.681 - - - - 0.896 0.785 - - - zgc:158417 [Source:ZFIN;Acc:ZDB-GENE-061201-36]
21. arhgap17b ENSDARG00000062263 55 1.671 - - - - - 0.790 - - 0.881 Rho GTPase activating protein 17b [Source:ZFIN;Acc:ZDB-GENE-080220-26]
22. CR407588.1 ENSDARG00000115460 9 1.669 - - - - 0.723 0.946 - - - SH3 and SYLF domain containing 1 [Source:NCBI gene;Acc:566522]
23. CU459160.1 CU459160.1 104 1.664 - - - - 0.825 - 0.839 - -
24. irx2a ENSDARG00000001785 262 1.657 - 0.942 - - - 0.715 - - - iroquois homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1446]
25. si:dkey-258p11.1 si:dkey-258p11.1 48 1.651 - - - - - 0.946 0.705 - -
26. CU571310.1 ENSDARG00000102580 53 1.651 - 0.824 - - - - - - 0.827 ras-related protein Rab-39A-like [Source:NCBI gene;Acc:100330257]
27. pms1 ENSDARG00000000476 105 1.648 - - 0.789 - - - - - 0.859 PMS1 homolog 1, mismatch repair system component [Source:ZFIN;Acc:ZDB-GENE-030616-528]
28. ftr53 ENSDARG00000041220, ENSDARG00000110329, ENSDARG00000110400, ENSDARG00000116082 18 1.647 - 0.701 - - - 0.946 - - - finTRIM family, member 53 [Source:ZFIN;Acc:ZDB-GENE-030616-515]
29. foxj1a ENSDARG00000101919 1095 1.641 - - - - - - 0.863 - 0.778 forkhead box J1a [Source:ZFIN;Acc:ZDB-GENE-060929-1178]
30. lrrc48 lrrc48 50 1.63 - - - - - - 0.705 - 0.925
31. irx1a ENSDARG00000101831 644 1.626 - - - - - 0.792 0.834 - - iroquois homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-040707-1]
32. irak1 ENSDARG00000025949 19 1.623 - - - - 0.918 - 0.705 - - interleukin-1 receptor-associated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-071116-5]
33. ankrd46b ENSDARG00000015780 213 1.616 - 0.787 - - - - 0.829 - - ankyrin repeat domain 46b [Source:ZFIN;Acc:ZDB-GENE-050114-7]
34. hk2 ENSDARG00000101482, ENSDARG00000116757 92 1.614 - - - - - 0.792 - - 0.822 hexokinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2017]
35. si:dkey-176f19.7 ENSDARG00000103348 10 1.608 - - 0.883 - - 0.725 - - - si:dkey-176f19.7 [Source:ZFIN;Acc:ZDB-GENE-110913-130]
36. si:ch73-346m18.6 si:ch73-346m18.6 40 1.602 - - - - - 0.739 - - 0.863
37. PLCXD1_2 PLCXD1_2 9 1.601 - - - - 0.896 - 0.705 - -
38. GPR141 9 1.601 - - - - 0.829 0.772 - - - G protein-coupled receptor 141
39. stx12l ENSDARG00000044605 99 1.596 - - 0.713 - - - 0.883 - - syntaxin 12, like [Source:ZFIN;Acc:ZDB-GENE-110715-1]
40. chrna2a ENSDARG00000006602 163 1.592 - 0.775 - - - - 0.817 - - cholinergic receptor, nicotinic, alpha 2a (neuronal) [Source:ZFIN;Acc:ZDB-GENE-040108-2]
41. dusp14 ENSDARG00000057625, ENSDARG00000111613 68 1.591 - - 0.863 - - - - - 0.728 dual specificity phosphatase 14 [Source:ZFIN;Acc:ZDB-GENE-041010-162]
42. si:dkey-222f8.6 si:dkey-222f8.6 7 1.58 - - 0.875 - - - 0.705 - -
43. ttll9 ENSDARG00000062806 89 1.578 - - 0.745 - - - - - 0.833 tubulin tyrosine ligase-like family, member 9 [Source:ZFIN;Acc:ZDB-GENE-030131-1582]
44. tmeff1a ENSDARG00000008191 74 1.57 - - - - - - 0.757 - 0.813 transmembrane protein with EGF-like and two follistatin-like domains 1a [Source:ZFIN;Acc:ZDB-GENE-070912-294]
45. PEG3_15 PEG3_15 113 1.546 - 0.791 - - - 0.755 - - -
46. SMARCAD1 SMARCAD1 104 1.545 - - - - - - 0.798 - 0.747
47. CCHCR1 CCHCR1 238 1.545 - 0.787 - - - - 0.758 - -
48. si:dkey-23a23.2 ENSDARG00000023036 123 1.539 - - 0.762 - - 0.777 - - - si:dkey-23a23.2 [Source:ZFIN;Acc:ZDB-GENE-060503-158]
49. cyp3c4 ENSDARG00000070021 95 1.522 - 0.817 - - - - 0.705 - - cytochrome P450, family 3, subfamily C, polypeptide 4 [Source:ZFIN;Acc:ZDB-GENE-060929-96]
50. dlg4 88 1.517 - - - - 0.751 - 0.766 - - discs large MAGUK scaffold protein 4, transcript variant X5
51. myl2b ENSDARG00000053424 226 1.512 - 0.737 - - - - - - 0.775 myosin, light chain 2b, regulatory, cardiac, slow [Source:ZFIN;Acc:ZDB-GENE-060331-137]
52. cdx4 ENSDARG00000036292 1225 1.498 - - - - - 0.788 0.710 - - caudal type homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-980526-330]
53. gdf6a ENSDARG00000053479 121 1.496 - - - - - 0.770 - - 0.726 growth differentiation factor 6a [Source:ZFIN;Acc:ZDB-GENE-980526-373]
54. gaa ENSDARG00000090714 19 1.477 - - - - - 0.772 0.705 - - glucosidase, alpha; acid (Pompe disease, glycogen storage disease type II) [Source:ZFIN;Acc:ZDB-GENE-070212-2]
55. cart4 ENSDARG00000070142 55 1.446 - - - 0.741 - - 0.705 - - cocaine- and amphetamine-regulated transcript 4 [Source:ZFIN;Acc:ZDB-GENE-060503-863]
56. agrn_1 ENSDARG00000079388, ENSDARG00000110127 47 1.412 - 0.707 - - - - 0.705 - - agrin [Source:ZFIN;Acc:ZDB-GENE-030131-1033]
57. BX324198.1 BX324198.1 12 1 - - - 1.000 - - - - -
58. si:ch211-182e10.4 ENSDARG00000070661, ENSDARG00000070757 1 1 - - - 1.000 - - - - - si:ch211-182e10.4 [Source:ZFIN;Acc:ZDB-GENE-041014-76]
59. cers3b ENSDARG00000036337 1 1 - - - 1.000 - - - - - ceramide synthase 3b [Source:ZFIN;Acc:ZDB-GENE-080220-32]
60. NWD1 ENSDARG00000076110 3 1 - - - 1.000 - - - - - NACHT and WD repeat domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-071116-8]
61. KLHDC8A ENSDARG00000061000 13 1 - - - 1.000 - - - - - kelch domain containing 8A [Source:ZFIN;Acc:ZDB-GENE-120810-3]
62. CABZ01084273.1 CABZ01084273.1 16 1 - - - 1.000 - - - - -
63. slc17a8 ENSDARG00000057728, ENSDARG00000109791 8 1 - - - 1.000 - - - - - solute carrier family 17 (vesicular glutamate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-060503-416]
64. CT025771.1 ENSDARG00000117721 13 1 - - - 1.000 - - - - -
65. MAD2L2 ENSDARG00000042456 0 1 - - - 1.000 - - - - - mitotic arrest deficient 2 like 2 [Source:ZFIN;Acc:ZDB-GENE-050417-61]
66. med8 ENSDARG00000114425 7 1 - - - 1.000 - - - - - mediator complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2091]
67. PACRG ENSDARG00000087556 7 1 - - - 1.000 - - - - - PARK2 co-regulated [Source:ZFIN;Acc:ZDB-GENE-041114-100]
68. gria1b ENSDARG00000032714, ENSDARG00000111658 12 1 - - - 1.000 - - - - - glutamate receptor, ionotropic, AMPA 1b [Source:ZFIN;Acc:ZDB-GENE-020125-2]
69. ATP6V1C2 ENSDARG00000070440 2 1 - - - 1.000 - - - - - ATPase H+ transporting V1 subunit C2 [Source:ZFIN;Acc:ZDB-GENE-131127-65]
70. pcdh1a4 0 1 - - - 1.000 - - - - - protocadherin 1 alpha 4
71. mir30b 4 1 - - - 1.000 - - - - - microRNA 30b
72. gpr34b ENSDARG00000002959 0 1 - - - 1.000 - - - - - G protein-coupled receptor 34b [Source:ZFIN;Acc:ZDB-GENE-040823-1]
73. taar14e ENSDARG00000090372, ENSDARG00000112236 0 1 - - - 1.000 - - - - - trace amine associated receptor 14e [Source:ZFIN;Acc:ZDB-GENE-041210-317]
74. pdha1b ENSDARG00000010555, ENSDARG00000114832 4 1 - - - 1.000 - - - - - pyruvate dehydrogenase E1 alpha 1 subunit b [Source:ZFIN;Acc:ZDB-GENE-040718-96]
75. si:ch211-274k16.4 si:ch211-274k16.4 6 1 - - - 1.000 - - - - -
76. svopa ENSDARG00000056833 14 1 - - - 1.000 - - - - - SV2 related protein a [Source:ZFIN;Acc:ZDB-GENE-060526-336]
77. urgcp ENSDARG00000036767 6 1 - - - 1.000 - - - - - upregulator of cell proliferation [Source:ZFIN;Acc:ZDB-GENE-120215-160]
78. si:dkey-61m24.1 0 1 - - - 1.000 - - - - - si:dkey-61m24.1
79. rpgrip1l ENSDARG00000051754 2 1 - - - 1.000 - - - - - RPGRIP1-like [Source:ZFIN;Acc:ZDB-GENE-081104-81]
80. si:ch211-232m19.4 19 1 - - - 1.000 - - - - - si:ch211-232m19.4
81. glsa ENSDARG00000062812 1 1 - - - 1.000 - - - - - glutaminase a [Source:ZFIN;Acc:ZDB-GENE-050204-3]
82. si:dkey-19j7.4 si:dkey-19j7.4 1 1 - - - 1.000 - - - - -
83. prph2a ENSDARG00000038018 2 1 - - - 1.000 - - - - - peripherin 2a (retinal degeneration, slow) [Source:ZFIN;Acc:ZDB-GENE-000616-8]
84. CABZ01067071.1 CABZ01067071.1 0 1 - - - 1.000 - - - - -
85. AC024175.11 AC024175.11 12 1 - - - 1.000 - - - - -
86. si:dkey-34f9.3 ENSDARG00000077813 3 1 - - - 1.000 - - - - - si:dkey-34f9.3 [Source:ZFIN;Acc:ZDB-GENE-081104-410]
87. abcc13 ENSDARG00000062519 2 1 - - - 1.000 - - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 13 [Source:ZFIN;Acc:ZDB-GENE-050517-26]
88. wfikkn1 ENSDARG00000101364 11 1 - - - 1.000 - - - - - WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2465]
89. si:dkey-33g13.1 si:dkey-33g13.1 3 1 - - - 1.000 - - - - -
90. RMI2 ENSDARG00000103137 0 1 - - - 1.000 - - - - - RecQ mediated genome instability 2 [Source:ZFIN;Acc:ZDB-GENE-131125-13]
91. CU062632.1 ENSDARG00000117236 0 1 - - - 1.000 - - - - - ubiquitin-conjugating enzyme E2O [Source:NCBI gene;Acc:101883975]
92. plscr3a ENSDARG00000093078 7 1 - - - 1.000 - - - - - phospholipid scramblase 3a [Source:ZFIN;Acc:ZDB-GENE-060531-17]
93. lratb 3 1 - - - 1.000 - - - - - lecithin retinol acyltransferase b (phosphatidylcholine-retinol O-acyltransferase), transcript variant X2
94. entpd2a.1 ENSDARG00000035506 14 1 - - - 1.000 - - - - - ectonucleoside triphosphate diphosphohydrolase 2a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040724-187]
95. C1GALT1_1 C1GALT1_1 1 1 - - - 1.000 - - - - -
96. CU459095.1 CU459095.1 7 1 - - - 1.000 - - - - -
97. fam196ab 2 1 - - - 1.000 - - - - - family with sequence similarity 196, member Ab
98. VWA5A_1 VWA5A_1 6 1 - - - 1.000 - - - - -
99. hsf4 ENSDARG00000013251 5 1 - - - 1.000 - - - - - heat shock transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-050306-18]
100. si:dkeyp-8h3.9 si:dkeyp-8h3.9 3 1 - - - 1.000 - - - - -

There are 1375 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA