Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-222k6.2

Gene Name Gene ID Reads Annotation
si:ch211-222k6.2 ENSDARG00000087046 144 si:ch211-222k6.2 [Source:ZFIN;Acc:ZDB-GENE-030131-9038]










Genes with expression patterns similar to si:ch211-222k6.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-222k6.2 ENSDARG00000087046 144 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-222k6.2 [Source:ZFIN;Acc:ZDB-GENE-030131-9038]
2. zgc:114037_4 57 1.871 1.000 0.871 - - - - - - - zgc:114037
3. FP074874.1 ENSDARG00000102679 40 1.868 - 0.954 0.914 - - - - - - si:ch73-158p21.7 [Source:NCBI gene;Acc:100331388]
4. fam178a fam178a 29 1.819 1.000 - 0.819 - - - - - -
5. U1_50 U1_50 62 1.812 0.948 0.864 - - - - - - -
6. PPM1J ENSDARG00000074690 109 1.799 0.930 0.869 - - - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1J [Source:ZFIN;Acc:ZDB-GENE-091230-9]
7. STEAP2 ENSDARG00000062887 59 1.789 0.839 0.950 - - - - - - - STEAP family member 2, metalloreductase [Source:ZFIN;Acc:ZDB-GENE-131121-79]
8. si:dkey-258p11.1 si:dkey-258p11.1 48 1.758 0.851 0.907 - - - - - - -
9. nalcn ENSDARG00000001835 294 1.754 - 0.956 - - - 0.798 - - - sodium leak channel, non-selective [Source:ZFIN;Acc:ZDB-GENE-050410-12]
10. htr1fa ENSDARG00000002773, ENSDARG00000109862 38 1.754 - - 0.925 0.829 - - - - - 5-hydroxytryptamine (serotonin) receptor 1Fa [Source:ZFIN;Acc:ZDB-GENE-081105-125]
11. agbl4 ENSDARG00000068050, ENSDARG00000110838 201 1.74 0.876 - - - - 0.864 - - - ATP/GTP binding protein-like 4 [Source:ZFIN;Acc:ZDB-GENE-081104-437]
12. fam73b 76 1.731 1.000 - - 0.731 - - - - - family with sequence similarity 73, member B
13. si:dkeyp-72g9.4 ENSDARG00000073704 98 1.726 0.798 0.928 - - - - - - - si:dkeyp-72g9.4 [Source:ZFIN;Acc:ZDB-GENE-031204-23]
14. efr3ba ENSDARG00000033516 19 1.717 1.000 - - - - 0.717 - - - EFR3 homolog Ba (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030616-64]
15. rassf7a ENSDARG00000079917 162 1.715 0.852 0.863 - - - - - - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 7a [Source:ZFIN;Acc:ZDB-GENE-091013-3]
16. CLEC17A CLEC17A 42 1.714 - - 0.924 - 0.790 - - - -
17. gphnb ENSDARG00000100851 118 1.704 0.901 - - - - 0.803 - - - gephyrin b [Source:ZFIN;Acc:ZDB-GENE-070705-4]
18. CR538726.1 ENSDARG00000097179 321 1.678 - - 0.855 - - - 0.823 - -
19. zgc:193801 ENSDARG00000076552 37 1.677 - - 0.872 0.805 - - - - - zgc:193801 [Source:ZFIN;Acc:ZDB-GENE-081022-40]
20. CR407547.1 ENSDARG00000117572 41 1.671 0.852 - - - 0.819 - - - -
21. TSPEAR TSPEAR 9 1.671 - 0.954 - - - 0.717 - - -
22. si:ch211-286m4.1 si:ch211-286m4.1 47 1.669 0.914 0.755 - - - - - - -
23. runx2b ENSDARG00000059233 106 1.655 - 0.954 - 0.701 - - - - - runt-related transcription factor 2b [Source:ZFIN;Acc:ZDB-GENE-040629-4]
24. si:dkey-56m15.5 ENSDARG00000103420 229 1.636 - 0.884 - - - - 0.752 - - si:dkey-56m15.5 [Source:ZFIN;Acc:ZDB-GENE-110913-134]
25. ndufaf1 ENSDARG00000025549 42 1.635 0.763 - 0.872 - - - - - - NADH:ubiquinone oxidoreductase complex assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-050306-9]
26. rprmb ENSDARG00000024006 120 1.632 0.828 - 0.804 - - - - - - reprimo, TP53 dependent G2 arrest mediator candidate b [Source:ZFIN;Acc:ZDB-GENE-040426-1779]
27. C5H3orf30 C5H3orf30 63 1.616 0.730 0.886 - - - - - - -
28. ZNF800 ZNF800 72 1.602 0.842 0.760 - - - - - - -
29. ACTN4 ENSDARG00000099786 25 1.596 0.840 - - - 0.756 - - - - actinin, alpha 4 [Source:ZFIN;Acc:ZDB-GENE-030131-940]
30. dbx1b ENSDARG00000001859, ENSDARG00000113468 810 1.576 0.798 - - - - 0.778 - - - developing brain homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-000128-11]
31. mir196b ENSDARG00000081346 35 1.573 - 0.829 0.744 - - - - - - microRNA 196b [Source:ZFIN;Acc:ZDB-MIRNAG-081212-1]
32. DKK3 DKK3 12 1.572 0.855 - - - - 0.717 - - -
33. klhl22 ENSDARG00000088807 324 1.569 - 0.800 0.769 - - - - - - kelch-like family member 22 [Source:ZFIN;Acc:ZDB-GENE-081104-154]
34. p2rx3b ENSDARG00000029718 105 1.569 - - 0.748 - - 0.821 - - - purinergic receptor P2X, ligand-gated ion channel, 3b [Source:ZFIN;Acc:ZDB-GENE-030319-3]
35. mks1 ENSDARG00000059657, ENSDARG00000112247 126 1.563 0.789 - 0.774 - - - - - - Meckel syndrome, type 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3813]
36. si:ch211-102c2.8 ENSDARG00000093823 168 1.558 - 0.843 0.715 - - - - - - si:ch211-102c2.8 [Source:ZFIN;Acc:ZDB-GENE-081104-98]
37. tfpi2 ENSDARG00000061351, ENSDARG00000115583 61 1.557 0.818 - 0.739 - - - - - - tissue factor pathway inhibitor 2 [Source:ZFIN;Acc:ZDB-GENE-060503-38]
38. C11H1orf158 C11H1orf158 133 1.537 - 0.836 0.701 - - - - - -
39. b4galt2 ENSDARG00000077994 480 1.535 0.824 0.711 - - - - - - - UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-070912-258]
40. anapc2 ENSDARG00000105035 239 1.527 - 0.778 0.749 - - - - - - anaphase promoting complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-081104-256]
41. camsap1b ENSDARG00000035122 492 1.518 - 0.771 - - - - 0.747 - - calmodulin regulated spectrin-associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-070705-301]
42. si:dkey-70p6.1 ENSDARG00000092039, ENSDARG00000114631 19 1.512 0.743 - - - - 0.769 - - - si:dkey-70p6.1 [Source:ZFIN;Acc:ZDB-GENE-040724-140]
43. TMEM241 ENSDARG00000090685 11 1.499 - - - - 0.782 0.717 - - - transmembrane protein 241 [Source:ZFIN;Acc:ZDB-GENE-131127-368]
44. si:dkey-227h16.2 si:dkey-227h16.2 98 1.499 - - - - - 0.719 0.780 - -
45. snx18b ENSDARG00000044246, ENSDARG00000110012 51 1.488 - - 0.771 - - 0.717 - - - sorting nexin 18b [Source:ZFIN;Acc:ZDB-GENE-080213-6]
46. rgs7bpa ENSDARG00000060601 138 1.465 - - - - - 0.746 0.719 - - regulator of G protein signaling 7 binding protein a [Source:ZFIN;Acc:ZDB-GENE-060929-380]
47. topbp1 ENSDARG00000059322 241 1.452 - 0.726 - - 0.726 - - - - DNA topoisomerase II binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060626-1]
48. tmem9 ENSDARG00000055757 340 1.446 - 0.706 - - - 0.740 - - - transmembrane protein 9 [Source:ZFIN;Acc:ZDB-GENE-030131-6083]
49. lrch2 ENSDARG00000075580, ENSDARG00000116418 255 1.438 - - 0.715 0.723 - - - - - leucine-rich repeats and calponin homology (CH) domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-080114-1]
50. RECQL4 ENSDARG00000077516 462 1.436 0.730 0.706 - - - - - - - RecQ helicase-like 4 [Source:ZFIN;Acc:ZDB-GENE-091112-2]
51. si:dkey-269d20.3 si:dkey-269d20.3 40 1.429 - 0.713 - 0.716 - - - - -
52. zfp64 ENSDARG00000061147 44 1 1.000 - - - - - - - - zinc finger protein 64 homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-031118-80]
53. CU896645.1 CU896645.1 10 1 1.000 - - - - - - - -
54. ncanb ENSDARG00000005783 22 1 1.000 - - - - - - - - neurocan b [Source:ZFIN;Acc:ZDB-GENE-050208-586]
55. si:dkey-238o14.1 ENSDARG00000100099 1 1 1.000 - - - - - - - - si:dkey-238o14.1 [Source:ZFIN;Acc:ZDB-GENE-081103-10]
56. gabrr2a ENSDARG00000052982 21 1 1.000 - - - - - - - - gamma-aminobutyric acid (GABA) A receptor, rho 2a [Source:ZFIN;Acc:ZDB-GENE-060825-164]
57. ndrg1b ENSDARG00000010420 116 1 1.000 - - - - - - - - N-myc downstream regulated 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1648]
58. BSN_1 BSN_1 21 1 1.000 - - - - - - - -
59. BX248120.1 BX248120.1 4 1 1.000 - - - - - - - -
60. HIST2H4B HIST2H4B 9 1 1.000 - - - - - - - -
61. CLTCL1_1 CLTCL1_1 1 1 1.000 - - - - - - - -
62. CT583709.2 CT583709.2 55 1 1.000 - - - - - - - -
63. zgc:174710 13 1 1.000 - - - - - - - - zgc:174710
64. CABZ01069020.1 ENSDARG00000105806 19 1 1.000 - - - - - - - - si:cabz01069020.1 [Source:NCBI gene;Acc:100332930]
65. KCNIP4 ENSDARG00000088100 86 1 1.000 - - - - - - - - potassium voltage-gated channel interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:30083]
66. bcat1 ENSDARG00000045568 39 1 1.000 - - - - - - - - branched chain amino-acid transaminase 1, cytosolic [Source:ZFIN;Acc:ZDB-GENE-030131-9358]
67. si:ch211-197k17.3 ENSDARG00000096214 2 1 1.000 - - - - - - - - si:ch211-197k17.3 [Source:ZFIN;Acc:ZDB-GENE-110914-193]
68. chrm2a ENSDARG00000098612 5 1 1.000 - - - - - - - - cholinergic receptor, muscarinic 2a [Source:ZFIN;Acc:ZDB-GENE-030314-1]
69. SNORA63 SNORA63 7 1 1.000 - - - - - - - -
70. tceanc2 ENSDARG00000062919 32 1 1.000 - - - - - - - - transcription elongation factor A (SII) N-terminal and central domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070705-486]
71. zgc:165409_1 ENSDARG00000091385 65 1 1.000 - - - - - - - - zgc:165409 [Source:ZFIN;Acc:ZDB-GENE-070615-19]
72. pdcl ENSDARG00000009480 12 1 1.000 - - - - - - - - phosducin-like [Source:ZFIN;Acc:ZDB-GENE-030131-2365]
73. SLC2A13 SLC2A13 74 1 1.000 - - - - - - - -
74. pygl ENSDARG00000002197 192 1 1.000 - - - - - - - - phosphorylase, glycogen, liver [Source:ZFIN;Acc:ZDB-GENE-041205-1]
75. lyve1a ENSDARG00000075833 25 1 1.000 - - - - - - - - lymphatic vessel endothelial hyaluronic receptor 1a [Source:ZFIN;Acc:ZDB-GENE-031118-138]
76. GABRA3 ENSDARG00000090883 5 1 1.000 - - - - - - - - gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-091204-365]
77. DNER ENSDARG00000061031 123 1 1.000 - - - - - - - - delta/notch-like EGF repeat containing [Source:ZFIN;Acc:ZDB-GENE-130502-1]
78. spata20 ENSDARG00000013880 46 1 1.000 - - - - - - - - spermatogenesis associated 20 [Source:ZFIN;Acc:ZDB-GENE-030131-7269]
79. BTBD17_1 BTBD17_1 42 1 1.000 - - - - - - - -
80. BX469910.2 ENSDARG00000096127 6 1 1.000 - - - - - - - -
81. pex10 ENSDARG00000041511 52 1 1.000 - - - - - - - - peroxisomal biogenesis factor 10 [Source:ZFIN;Acc:ZDB-GENE-041010-71]
82. snapc1a ENSDARG00000029569 25 1 1.000 - - - - - - - - small nuclear RNA activating complex, polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1031]
83. AL935272.2 AL935272.2 37 1 1.000 - - - - - - - -
84. prpf4 ENSDARG00000067639, ENSDARG00000114457, ENSDARG00000114653 10 1 1.000 - - - - - - - - PRP4 pre-mRNA processing factor 4 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-5143]
85. taar16a ENSDARG00000054237 1 1 1.000 - - - - - - - - trace amine associated receptor 16a [Source:ZFIN;Acc:ZDB-GENE-100514-1]
86. GALNT9 ENSDARG00000006832 120 1 1.000 - - - - - - - - polypeptide N-acetylgalactosaminyltransferase 9 [Source:ZFIN;Acc:ZDB-GENE-060526-21]
87. CR391962.1 CR391962.1 31 1 1.000 - - - - - - - -
88. gpr12 ENSDARG00000062934 7 1 1.000 - - - - - - - - G protein-coupled receptor 12 [Source:ZFIN;Acc:ZDB-GENE-100209-3]
89. TRIM46 TRIM46 73 1 1.000 - - - - - - - -
90. WDPCP ENSDARG00000074590 35 1 1.000 - - - - - - - - WD repeat containing planar cell polarity effector [Source:ZFIN;Acc:ZDB-GENE-100405-4]
91. chrna9 ENSDARG00000054680 4 1 1.000 - - - - - - - - cholinergic receptor, nicotinic, alpha 9 [Source:ZFIN;Acc:ZDB-GENE-090312-63]
92. six6a ENSDARG00000025187 40 1 1.000 - - - - - - - - SIX homeobox 6a [Source:ZFIN;Acc:ZDB-GENE-040426-1282]
93. C20H2orf70 C20H2orf70 8 1 1.000 - - - - - - - -
94. si:ch211-167j6.3 ENSDARG00000095504 5 1 1.000 - - - - - - - - si:ch211-167j6.3 [Source:ZFIN;Acc:ZDB-GENE-070912-145]
95. zgc:114081 ENSDARG00000057899, ENSDARG00000113048 5 1 1.000 - - - - - - - - zgc:114081 [Source:ZFIN;Acc:ZDB-GENE-050913-78]
96. cpne5 cpne5 16 1 1.000 - - - - - - - -
97. si:dkey-14d8.19 si:dkey-14d8.19 12 1 1.000 - - - - - - - -
98. TMEM100_1 TMEM100_1 44 1 1.000 - - - - - - - -
99. CNTNAP1 ENSDARG00000074524 73 1 1.000 - - - - - - - - contactin associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030916-2]
100. si:ch211-122l24.2 si:ch211-122l24.2 1 1 1.000 - - - - - - - -

There are 1231 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA