Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-214b16.4

Gene Name Gene ID Reads Annotation
si:ch211-214b16.4 ENSDARG00000074345 261 si:ch211-214b16.4 [Source:ZFIN;Acc:ZDB-GENE-081105-53]










Genes with expression patterns similar to si:ch211-214b16.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-214b16.4 ENSDARG00000074345 261 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-214b16.4 [Source:ZFIN;Acc:ZDB-GENE-081105-53]
2. gdap1l1 ENSDARG00000028628 233 1.822 - 0.867 - - - - - 0.955 - ganglioside induced differentiation associated protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-080812-2]
3. C9H2orf69 C9H2orf69 148 1.749 - - - - - 0.786 - 0.963 -
4. C22H19orf44 C22H19orf44 481 1.747 - 0.777 - - - - - 0.970 -
5. asb16 ENSDARG00000056468, ENSDARG00000110292 126 1.719 - 0.744 - - - - - 0.975 - ankyrin repeat and SOCS box containing 16 [Source:ZFIN;Acc:ZDB-GENE-031031-3]
6. FP102801.1_1 FP102801.1_1 238 1.718 - - - - - 0.747 - 0.971 -
7. si:dkey-9i5.1 si:dkey-9i5.1 36 1.711 - 0.737 - - - - - 0.974 -
8. manea ENSDARG00000001898 450 1.697 0.751 - - - - - - 0.946 - mannosidase, endo-alpha [Source:ZFIN;Acc:ZDB-GENE-040912-87]
9. fam131a ENSDARG00000077022 445 1.667 - - - - - 0.799 0.868 - - family with sequence similarity 131, member A [Source:ZFIN;Acc:ZDB-GENE-080204-112]
10. hspg2 ENSDARG00000076564 3440 1.662 - 0.768 - - - - - 0.894 - heparan sulfate proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-080807-4]
11. acaca ENSDARG00000078512, ENSDARG00000114071 386 1.658 - - - - - 0.735 - 0.923 - acetyl-CoA carboxylase alpha [Source:ZFIN;Acc:ZDB-GENE-060526-74]
12. fundc2 ENSDARG00000103740 3856 1.647 - - - - - 0.759 - 0.888 - fun14 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041010-26]
13. hspb11 ENSDARG00000002204 879 1.635 - 0.776 - - - 0.859 - - - heat shock protein, alpha-crystallin-related, b11 [Source:ZFIN;Acc:ZDB-GENE-030131-5148]
14. kif19 ENSDARG00000053026 124 1.631 - - - - - 0.743 - 0.888 - kinesin family member 19 [Source:ZFIN;Acc:ZDB-GENE-080215-2]
15. nfybb ENSDARG00000045611, ENSDARG00000110926 350 1.627 - - - - - 0.785 - 0.842 - nuclear transcription factor Y, beta b [Source:ZFIN;Acc:ZDB-GENE-050306-25]
16. myo16 ENSDARG00000078582 714 1.622 - 0.714 - - - - - 0.908 - myosin XVI [Source:ZFIN;Acc:ZDB-GENE-070912-470]
17. ENSDARG00000075779 ENSDARG00000075779 64 1.615 - - - - - 0.867 0.748 - -
18. lgi2a ENSDARG00000111069 965 1.603 - 0.803 - - - - - 0.800 - leucine-rich repeat LGI family, member 2a [Source:ZFIN;Acc:ZDB-GENE-060217-2]
19. vhl ENSDARG00000070617 663 1.563 - - - - - 0.850 0.713 - - von Hippel-Lindau tumor suppressor [Source:ZFIN;Acc:ZDB-GENE-070112-1042]
20. bcl9 ENSDARG00000036687 1124 1.561 - 0.802 - - - 0.759 - - - B cell CLL/lymphoma 9 [Source:ZFIN;Acc:ZDB-GENE-090313-135]
21. hsd17b12b ENSDARG00000035872 631 1.558 0.710 - - - - - 0.848 - - hydroxysteroid (17-beta) dehydrogenase 12b [Source:ZFIN;Acc:ZDB-GENE-030131-1346]
22. synm ENSDARG00000062350, ENSDARG00000113948, ENSDARG00000114029 483 1.553 - 0.846 - - - 0.707 - - - synemin, intermediate filament protein [Source:ZFIN;Acc:ZDB-GENE-050419-81]
23. slc2a15a ENSDARG00000029894 2674 1.546 - 0.795 - - - - - 0.751 - solute carrier family 2 (facilitated glucose transporter), member 15a [Source:ZFIN;Acc:ZDB-GENE-060531-109]
24. HDAC7 HDAC7 12 1.545 - - - - - - 0.758 - 0.787
25. nrsn1 ENSDARG00000111235 123 1.533 - 0.763 - - - 0.770 - - - neurensin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7491]
26. depdc5 ENSDARG00000078105 745 1.532 - - - - - 0.817 - 0.715 - DEP domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-091204-356]
27. pex13 ENSDARG00000071037 738 1.528 0.798 - - - - - - 0.730 - peroxisomal biogenesis factor 13 [Source:ZFIN;Acc:ZDB-GENE-040426-1544]
28. mark3 mark3 1375 1.528 - - - - - - 0.730 0.798 -
29. cox4i2 ENSDARG00000022509 362 1.518 - 0.760 - - - - 0.758 - - cytochrome c oxidase subunit 4I2 [Source:ZFIN;Acc:ZDB-GENE-040426-1775]
30. adi1 ENSDARG00000020448 1402 1.511 0.738 - - - - - 0.773 - - acireductone dioxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2799]
31. ISM2 ISM2 1710 1.507 - - - - - 0.734 0.773 - -
32. col11a2 ENSDARG00000012422 3204 1.485 - 0.755 - - - - - 0.730 - collagen, type XI, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-000208-23]
33. nup153 ENSDARG00000099972 1462 1.484 - - - - - 0.743 - 0.741 - nucleoporin 153 [Source:ZFIN;Acc:ZDB-GENE-030131-4581]
34. CDA 491 1.483 - 0.780 - - - 0.703 - - - cytidine deaminase
35. tbx15 ENSDARG00000002582 755 1.478 - 0.708 - - - 0.770 - - - T-box 15 [Source:ZFIN;Acc:ZDB-GENE-020529-1]
36. pknox1.1_1 ENSDARG00000018765 203 1.478 - 0.751 - - - 0.727 - - - pbx/knotted 1 homeobox 1.1 [Source:ZFIN;Acc:ZDB-GENE-020122-5]
37. c1galt1b ENSDARG00000055561, ENSDARG00000113870 1795 1.473 - - - - - 0.715 0.758 - - core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9075]
38. sox2 ENSDARG00000070913 2763 1.449 - 0.702 - - - 0.747 - - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
39. herc2 ENSDARG00000073841 486 1.448 - 0.742 - - - - 0.706 - - HECT and RLD domain containing E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-070718-6]
40. fam65b 557 1.447 - - - - - 0.740 0.707 - - family with sequence similarity 65, member B, transcript variant X4
41. nrp1b ENSDARG00000027290 170 1.431 - 0.714 - - - 0.717 - - - neuropilin 1b [Source:ZFIN;Acc:ZDB-GENE-040611-1]
42. syngr1a ENSDARG00000002564 209 1.43 - 0.724 - - - 0.706 - - - synaptogyrin 1a [Source:ZFIN;Acc:ZDB-GENE-041010-169]
43. TTF1_5 TTF1_5 705 1.425 - 0.719 - - - - 0.706 - -
44. CABZ01041962.1 ENSDARG00000076082 690 0.983 - - - - - - - 0.983 - uncharacterized LOC798124 [Source:NCBI gene;Acc:798124]
45. nr3c2 ENSDARG00000102082, ENSDARG00000115513 122 0.977 - - - - - - - 0.977 - nuclear receptor subfamily 3, group C, member 2 [Source:ZFIN;Acc:ZDB-GENE-060531-23]
46. gnb1a ENSDARG00000090454 481 0.977 - - - - - - - 0.977 - guanine nucleotide binding protein (G protein), beta polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-030131-823]
47. si:dkey-242e21.3 ENSDARG00000075723 77 0.976 - - - - - - - 0.976 - si:dkey-242e21.3 [Source:ZFIN;Acc:ZDB-GENE-100922-110]
48. CR848025.1 ENSDARG00000100501 35 0.975 - - - - - - - 0.975 - si:dkey-202l22.4 [Source:NCBI gene;Acc:101882714]
49. si:ch211-218m3.16 ENSDARG00000044336 33 0.975 - - - - - - - 0.975 - si:ch211-218m3.16 [Source:ZFIN;Acc:ZDB-GENE-091116-19]
50. CR847543.1 ENSDARG00000086708 155 0.975 - - - - - - - 0.975 -
51. GIPR ENSDARG00000025478 87 0.975 - - - - - - - 0.975 - gastric inhibitory polypeptide receptor [Source:ZFIN;Acc:ZDB-GENE-050516-4]
52. si:dkey-10c21.1 ENSDARG00000079133 32 0.975 - - - - - - - 0.975 - si:dkey-10c21.1 [Source:ZFIN;Acc:ZDB-GENE-081104-302]
53. MSH4 ENSDARG00000075826 37 0.975 - - - - - - - 0.975 - mutS homolog 4 [Source:ZFIN;Acc:ZDB-GENE-131121-643]
54. zpcx ENSDARG00000059252, ENSDARG00000111002 33 0.975 - - - - - - - 0.975 - zona pellucida protein C [Source:ZFIN;Acc:ZDB-GENE-040824-1]
55. ccdc41 ccdc41 97 0.975 - - - - - - - 0.975 -
56. si:dkey-11f4.20 ENSDARG00000100887 38 0.975 - - - - - - - 0.975 - si:dkey-11f4.20 [Source:ZFIN;Acc:ZDB-GENE-070912-359]
57. meiob 75 0.975 - - - - - - - 0.975 - meiosis specific with OB domains
58. si:dkeyp-87d1.1 ENSDARG00000104681 35 0.975 - - - - - - - 0.975 - si:dkeyp-87d1.1 [Source:ZFIN;Acc:ZDB-GENE-041014-75]
59. CR388228.1 ENSDARG00000117809 31 0.975 - - - - - - - 0.975 - uncharacterized LOC110437756 [Source:NCBI gene;Acc:110437756]
60. dnase1 ENSDARG00000012539 65 0.975 - - - - - - - 0.975 - deoxyribonuclease I [Source:ZFIN;Acc:ZDB-GENE-040718-423]
61. si:ch211-173p18.3_1 ENSDARG00000035821 36 0.975 - - - - - - - 0.975 - si:ch211-173p18.3 [Source:ZFIN;Acc:ZDB-GENE-060503-672]
62. si:ch73-108h4.3 si:ch73-108h4.3 193 0.975 - - - - - - - 0.975 -
63. fancg ENSDARG00000024967, ENSDARG00000113462 82 0.974 - - - - - - - 0.974 - FA complementation group G [Source:ZFIN;Acc:ZDB-GENE-050417-103]
64. zgc:113336 ENSDARG00000104078 147 0.974 - - - - - - - 0.974 - zgc:113336 [Source:ZFIN;Acc:ZDB-GENE-050320-55]
65. si:ch211-233h19.2 ENSDARG00000042213 47 0.973 - - - - - - - 0.973 - si:ch211-233h19.2 [Source:ZFIN;Acc:ZDB-GENE-061009-14]
66. si:ch211-193e13.5 ENSDARG00000052656 61 0.973 - - - - - - - 0.973 - si:ch211-193e13.5 [Source:ZFIN;Acc:ZDB-GENE-081104-158]
67. rad9a ENSDARG00000056984, ENSDARG00000115514 152 0.973 - - - - - - - 0.973 - RAD9 checkpoint clamp component A [Source:ZFIN;Acc:ZDB-GENE-040426-935]
68. si:dkeyp-27e10.6 si:dkeyp-27e10.6 36 0.973 - - - - - - - 0.973 -
69. gnal ENSDARG00000045415 164 0.973 - - - - - - - 0.973 - guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type [Source:ZFIN;Acc:ZDB-GENE-041114-26]
70. htr3b ENSDARG00000061749 49 0.973 - - - - - - - 0.973 - 5-hydroxytryptamine (serotonin) receptor 3B [Source:ZFIN;Acc:ZDB-GENE-071012-4]
71. CABZ01088365.1 CABZ01088365.1 66 0.972 - - - - - - - 0.972 -
72. nitr3a_1 ENSDARG00000110676 44 0.972 - - - - - - - 0.972 - novel immune-type receptor 3a [Source:NCBI gene;Acc:60649]
73. mecr ENSDARG00000032326 314 0.972 - - - - - - - 0.972 - mitochondrial trans-2-enoyl-CoA reductase [Source:ZFIN;Acc:ZDB-GENE-050417-399]
74. PIK3R6 PIK3R6 149 0.972 - - - - - - - 0.972 -
75. zgc:153292 ENSDARG00000070458, ENSDARG00000112223 134 0.972 - - - - - - - 0.972 - zgc:153292 [Source:ZFIN;Acc:ZDB-GENE-060929-1098]
76. pigm ENSDARG00000024277 86 0.971 - - - - - - - 0.971 - phosphatidylinositol glycan anchor biosynthesis, class M [Source:ZFIN;Acc:ZDB-GENE-040426-1393]
77. tmub2 ENSDARG00000056467, ENSDARG00000109925 100 0.971 - - - - - - - 0.971 - transmembrane and ubiquitin-like domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030616-254]
78. adprh ENSDARG00000040712 298 0.971 - - - - - - - 0.971 - ADP-ribosylarginine hydrolase [Source:ZFIN;Acc:ZDB-GENE-040801-190]
79. ROBO3_1 ROBO3_1 468 0.97 - - - - - - - 0.970 -
80. rxfp2b ENSDARG00000019660 464 0.97 - - - - - - - 0.970 - relaxin family peptide receptor 2b [Source:ZFIN;Acc:ZDB-GENE-110408-27]
81. fbxl20 ENSDARG00000075567 138 0.97 - - - - - - - 0.970 - F-box and leucine-rich repeat protein 20 [Source:ZFIN;Acc:ZDB-GENE-081031-27]
82. pnp5b ENSDARG00000099802 551 0.969 - - - - - - - 0.969 - purine nucleoside phosphorylase 5b [Source:ZFIN;Acc:ZDB-GENE-040912-54]
83. nmu ENSDARG00000043299 67 0.969 - - - - - - - 0.969 - neuromedin U [Source:ZFIN;Acc:ZDB-GENE-041001-111]
84. TRIM67 ENSDARG00000108787 290 0.969 - - - - - - - 0.969 - tripartite motif containing 67 [Source:HGNC Symbol;Acc:HGNC:31859]
85. scpp8 ENSDARG00000093124 54 0.968 - - - - - - - 0.968 - secretory calcium-binding phosphoprotein 8 [Source:ZFIN;Acc:ZDB-GENE-090424-2]
86. wdr76 ENSDARG00000053554, ENSDARG00000115151 813 0.968 - - - - - - - 0.968 - WD repeat domain 76 [Source:ZFIN;Acc:ZDB-GENE-030131-4513]
87. CABZ01032488.1 ENSDARG00000099154 262 0.967 - - - - - - - 0.967 - wu:fb14d09 [Source:NCBI gene;Acc:100536795]
88. FGD5 FGD5 250 0.967 - - - - - - - 0.967 -
89. ADCYAP1R1 ADCYAP1R1 118 0.967 - - - - - - - 0.967 -
90. ZNF76 ENSDARG00000013279 260 0.966 - - - - - - - 0.966 - zinc finger protein 76 [Source:ZFIN;Acc:ZDB-GENE-061027-379]
91. PARP6_1 PARP6_1 331 0.966 - - - - - - - 0.966 -
92. kcnk9 ENSDARG00000104563 92 0.966 - - - - - - - 0.966 - potassium channel, subfamily K, member 9 [Source:ZFIN;Acc:ZDB-GENE-070705-260]
93. si:dkey-97a13.9 si:dkey-97a13.9 169 0.966 - - - - - - - 0.966 -
94. pak1ip1 ENSDARG00000044488 1995 0.965 - - - - - - - 0.965 - PAK1 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8414]
95. si:ch73-61d6.3 ENSDARG00000057826 274 0.965 - - - - - - - 0.965 - si:ch73-61d6.3 [Source:ZFIN;Acc:ZDB-GENE-091204-109]
96. rpp30 ENSDARG00000027428 286 0.964 - - - - - - - 0.964 - ribonuclease P/MRP 30 subunit [Source:ZFIN;Acc:ZDB-GENE-050320-45]
97. pou2f2b pou2f2b 134 0.964 - - - - - - - 0.964 -
98. tbc1d10a tbc1d10a 462 0.962 - - - - - - - 0.962 -
99. calb1 ENSDARG00000031598 252 0.962 - - - - - - - 0.962 - calbindin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8107]
100. si:dkey-6n6.2 ENSDARG00000058032 1186 0.962 - - - - - - - 0.962 - si:dkey-6n6.2 [Source:ZFIN;Acc:ZDB-GENE-060503-173]

There are 1323 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA