Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-209j12.4

Gene Name Gene ID Reads Annotation
si:ch211-209j12.4 si:ch211-209j12.4 43










Genes with expression patterns similar to si:ch211-209j12.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-209j12.4 si:ch211-209j12.4 43 6 1.000 - 1.000 1.000 1.000 - - 1.000 1.000
2. BX469915.2 BX469915.2 48 1.813 1.000 - - - - - - 0.813 -
3. mvd mvd 105 1.753 0.860 - - - - - - 0.893 -
4. ntf7 ntf7 72 1.753 1.000 - - - - - - 0.753 -
5. pih1d3 ENSDARG00000038612, ENSDARG00000116391, ENSDARG00000116607 57 1.744 0.860 - - - - - - 0.884 - PIH1 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040722-2]
6. f2rl1.1 ENSDARG00000068856 47 1.731 0.825 - - - - - - 0.906 - coagulation factor II (thrombin) receptor-like 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-061215-140]
7. TC2N ENSDARG00000095067 146 1.704 0.868 - - - - - - 0.836 - tandem C2 domains, nuclear [Source:HGNC Symbol;Acc:HGNC:19859]
8. esm1 ENSDARG00000104370 186 1.676 0.912 - - - - - - 0.764 - endothelial cell-specific molecule 1 [Source:ZFIN;Acc:ZDB-GENE-060929-748]
9. si:ch211-67f24.7 ENSDARG00000092721, ENSDARG00000092896 11 1.63 0.779 - - - - - - 0.851 - si:ch211-67f24.7 [Source:ZFIN;Acc:ZDB-GENE-090313-129]
10. pyyb ENSDARG00000035832 18 1 1.000 - - - - - - - - peptide YYb [Source:ZFIN;Acc:ZDB-GENE-060215-2]
11. gdf9 ENSDARG00000003229 4 1 1.000 - - - - - - - - growth differentiation factor 9 [Source:ZFIN;Acc:ZDB-GENE-050221-7]
12. BX323444.2 ENSDARG00000117710 13 1 1.000 - - - - - - - -
13. mink1 ENSDARG00000035360, ENSDARG00000112785 13 1 1.000 - - - - - - - - misshapen-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-060526-45]
14. bco2b ENSDARG00000041715 13 1 1.000 - - - - - - - - beta-carotene oxygenase 2b [Source:ZFIN;Acc:ZDB-GENE-060421-7448]
15. lars2 ENSDARG00000075337 31 1 1.000 - - - - - - - - leucyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-070928-3]
16. trhra ENSDARG00000076546 3 1 1.000 - - - - - - - - thyrotropin-releasing hormone receptor a [Source:ZFIN;Acc:ZDB-GENE-100922-18]
17. zgc:113691 ENSDARG00000038898 36 1 1.000 - - - - - - - - zgc:113691 [Source:ZFIN;Acc:ZDB-GENE-050220-7]
18. il15l ENSDARG00000007743, ENSDARG00000109605 17 1 1.000 - - - - - - - - interleukin 15, like [Source:ZFIN;Acc:ZDB-GENE-041111-173]
19. rdh14a ENSDARG00000039299 79 1 1.000 - - - - - - - - retinol dehydrogenase 14a [Source:ZFIN;Acc:ZDB-GENE-041010-124]
20. uckl1a ENSDARG00000001686 21 1 1.000 - - - - - - - - uridine-cytidine kinase 1-like 1a [Source:ZFIN;Acc:ZDB-GENE-040724-238]
21. mmp23bb ENSDARG00000009825 133 1 1.000 - - - - - - - - matrix metallopeptidase 23bb [Source:ZFIN;Acc:ZDB-GENE-050417-448]
22. esr2b ENSDARG00000034181 20 1 1.000 - - - - - - - - estrogen receptor 2b [Source:ZFIN;Acc:ZDB-GENE-030116-1]
23. zgc:158654 19 1 1.000 - - - - - - - - zgc:158654, transcript variant X1
24. si:ch211-150o20.5 si:ch211-150o20.5 1 1 1.000 - - - - - - - -
25. si:dkeyp-82h4.1 ENSDARG00000096463 18 1 1.000 - - - - - - - - si:dkeyp-82h4.1 [Source:ZFIN;Acc:ZDB-GENE-120709-49]
26. SLC47A1_2 SLC47A1_2 50 1 1.000 - - - - - - - -
27. BX511061.2 BX511061.2 30 1 1.000 - - - - - - - -
28. zgc:171759_5 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 274 1 1.000 - - - - - - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
29. zgc:174688 zgc:174688 170 1 1.000 - - - - - - - -
30. bmp1b ENSDARG00000028053 25 1 1.000 - - - - - - - - bone morphogenetic protein 1b [Source:ZFIN;Acc:ZDB-GENE-060818-2]
31. nipbla ENSDARG00000098272 26 1 1.000 - - - - - - - - nipped-B homolog a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060526-121]
32. rs1 rs1 70 1 1.000 - - - - - - - -
33. CABZ01041604.1 ENSDARG00000059854 35 1 1.000 - - - - - - - - E3 ubiquitin-protein ligase RNF182-like [Source:NCBI gene;Acc:797048]
34. rnf150a_1 ENSDARG00000024827 12 1 1.000 - - - - - - - - ring finger protein 150a [Source:ZFIN;Acc:ZDB-GENE-060213-1]
35. si:ch211-232m19.4 19 1 1.000 - - - - - - - - si:ch211-232m19.4
36. CABZ01054394.3 CABZ01054394.3 60 1 1.000 - - - - - - - -
37. si:ch211-188i4.4 5 1 1.000 - - - - - - - - si:ch211-188i4.4, transcript variant X3
38. MDFI ENSDARG00000089564 8 1 1.000 - - - - - - - - MyoD family inhibitor [Source:HGNC Symbol;Acc:HGNC:6967]
39. si:dkey-222b8.4 ENSDARG00000057227 13 1 1.000 - - - - - - - - si:dkey-222b8.4 [Source:ZFIN;Acc:ZDB-GENE-060503-438]
40. si:dkey-161j23.5 ENSDARG00000094441 11 1 1.000 - - - - - - - - si:dkey-161j23.5 [Source:ZFIN;Acc:ZDB-GENE-091204-373]
41. guk1b ENSDARG00000005776 23 1 1.000 - - - - - - - - guanylate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-020916-1]
42. gpr75 ENSDARG00000098526 32 1 1.000 - - - - - - - - G protein-coupled receptor 75 [Source:ZFIN;Acc:ZDB-GENE-100316-3]
43. traf1 ENSDARG00000069482 50 1 1.000 - - - - - - - - TNF receptor-associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-071120-4]
44. RBM11 ENSDARG00000090202 15 1 1.000 - - - - - - - - RNA binding motif protein 11 [Source:ZFIN;Acc:ZDB-GENE-091204-317]
45. htr3b ENSDARG00000061749 49 1 1.000 - - - - - - - - 5-hydroxytryptamine (serotonin) receptor 3B [Source:ZFIN;Acc:ZDB-GENE-071012-4]
46. arhgef3 ENSDARG00000013834 3 1 1.000 - - - - - - - - Rho guanine nucleotide exchange factor (GEF) 3 [Source:ZFIN;Acc:ZDB-GENE-050208-773]
47. tas1r3 ENSDARG00000006341 3 1 1.000 - - - - - - - - taste receptor, type 1, member 3 [Source:ZFIN;Acc:ZDB-GENE-070917-3]
48. RBBP6_3 RBBP6_3 34 1 1.000 - - - - - - - -
49. fbxo16 ENSDARG00000033949 35 1 1.000 - - - - - - - - F-box protein 16 [Source:ZFIN;Acc:ZDB-GENE-041015-747]
50. ARMC6 ENSDARG00000103770 39 1 1.000 - - - - - - - - armadillo repeat containing 6 [Source:HGNC Symbol;Acc:HGNC:25049]
51. luzp2 ENSDARG00000068247 80 1 1.000 - - - - - - - - leucine zipper protein 2 [Source:ZFIN;Acc:ZDB-GENE-060503-278]
52. BX927234.2 ENSDARG00000115246 3 1 1.000 - - - - - - - -
53. si:dkey-209n16.2 ENSDARG00000095914 27 1 1.000 - - - - - - - - si:dkey-209n16.2 [Source:ZFIN;Acc:ZDB-GENE-110408-44]
54. CABZ01061549.1 CABZ01061549.1 17 1 1.000 - - - - - - - -
55. eva1bb ENSDARG00000100698 223 1 1.000 - - - - - - - - eva-1 homolog Bb (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-080204-108]
56. CABZ01044085.1 CABZ01044085.1 3 1 1.000 - - - - - - - -
57. smad6b ENSDARG00000031763 12 1 1.000 - - - - - - - - SMAD family member 6b [Source:ZFIN;Acc:ZDB-GENE-050419-198]
58. BX465203.1 ENSDARG00000113985 8 1 1.000 - - - - - - - -
59. si:dkey-3h3.3 ENSDARG00000067718 225 1 1.000 - - - - - - - - si:dkey-3h3.3 [Source:ZFIN;Acc:ZDB-GENE-060526-299]
60. pabpn1l ENSDARG00000087996, ENSDARG00000113382 40 1 1.000 - - - - - - - - poly(A) binding protein, nuclear 1-like (cytoplasmic) [Source:ZFIN;Acc:ZDB-GENE-080709-5]
61. GMNC ENSDARG00000068719 28 1 1.000 - - - - - - - - geminin coiled-coil domain containing [Source:ZFIN;Acc:ZDB-GENE-121211-1]
62. TRIM14_8 TRIM14_8 5 1 1.000 - - - - - - - -
63. si:dkeyp-116h7.2 si:dkeyp-116h7.2 7 1 1.000 - - - - - - - -
64. GMIP ENSDARG00000077249 43 1 1.000 - - - - - - - - GEM interacting protein [Source:ZFIN;Acc:ZDB-GENE-130530-823]
65. CU469509.3 CU469509.3 1 1 1.000 - - - - - - - -
66. ONECUT3 ONECUT3 2 1 1.000 - - - - - - - -
67. hcrt ENSDARG00000070932 4 1 1.000 - - - - - - - - hypocretin (orexin) neuropeptide precursor [Source:ZFIN;Acc:ZDB-GENE-040324-1]
68. LPL ENSDARG00000087697 18 1 1.000 - - - - - - - - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
69. plekha7b ENSDARG00000062220, ENSDARG00000110462 11 1 1.000 - - - - - - - - pleckstrin homology domain containing, family A member 7b [Source:ZFIN;Acc:ZDB-GENE-091014-2]
70. ttc12 ENSDARG00000056896 97 1 1.000 - - - - - - - - tetratricopeptide repeat domain 12 [Source:ZFIN;Acc:ZDB-GENE-071016-4]
71. mcm5_1 ENSDARG00000019507 10 1 1.000 - - - - - - - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
72. si:dkeyp-66a7.1 si:dkeyp-66a7.1 6 1 1.000 - - - - - - - -
73. si:ch211-120c15.1 si:ch211-120c15.1 20 1 1.000 - - - - - - - -
74. ltk ENSDARG00000042861, ENSDARG00000116109 76 1 1.000 - - - - - - - - leukocyte receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-030616-115]
75. ucn3l ENSDARG00000087241 29 1 1.000 - - - - - - - - urocortin 3, like [Source:ZFIN;Acc:ZDB-GENE-060130-250]
76. SNORD18_2 SNORD18_2 7 1 1.000 - - - - - - - -
77. BX324215.4 BX324215.4 3 1 1.000 - - - - - - - -
78. CTBP2 CTBP2 19 1 1.000 - - - - - - - -
79. cx52.9 ENSDARG00000086453 7 1 1.000 - - - - - - - - connexin 52.9 [Source:ZFIN;Acc:ZDB-GENE-040426-2421]
80. FAM175B FAM175B 23 1 1.000 - - - - - - - -
81. tgfa ENSDARG00000053939 1 1 1.000 - - - - - - - - transforming growth factor, alpha [Source:ZFIN;Acc:ZDB-GENE-040724-208]
82. si:ch211-223a21.3 ENSDARG00000104737 28 1 1.000 - - - - - - - - si:ch211-223a21.3 [Source:ZFIN;Acc:ZDB-GENE-110913-50]
83. adipoqa ENSDARG00000062228 7 1 1.000 - - - - - - - - adiponectin, C1Q and collagen domain containing, a [Source:ZFIN;Acc:ZDB-GENE-080423-2]
84. SLC26A6 ENSDARG00000055835, ENSDARG00000097292 62 1 1.000 - - - - - - - - solute carrier family 26, member 6 [Source:ZFIN;Acc:ZDB-GENE-081105-83]
85. CABZ01066439.2 CABZ01066439.2 5 1 1.000 - - - - - - - -
86. CU638740.1 CU638740.1 398 1 1.000 - - - - - - - -
87. si:dkey-176f19.5 si:dkey-176f19.5 10 1 1.000 - - - - - - - -
88. si:ch73-27e22.1 ENSDARG00000111423 2 1 1.000 - - - - - - - - si:ch73-27e22.1 [Source:ZFIN;Acc:ZDB-GENE-081031-107]
89. sostdc1b ENSDARG00000056021, ENSDARG00000114829 33 1 1.000 - - - - - - - - sclerostin domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060503-653]
90. e2f5 ENSDARG00000038812 388 1 1.000 - - - - - - - - E2F transcription factor 5 [Source:ZFIN;Acc:ZDB-GENE-030828-3]
91. erbb4a ENSDARG00000063207 55 1 1.000 - - - - - - - - erb-b2 receptor tyrosine kinase 4a [Source:ZFIN;Acc:ZDB-GENE-030918-4]
92. cdk20 ENSDARG00000003867 27 1 1.000 - - - - - - - - cyclin-dependent kinase 20 [Source:ZFIN;Acc:ZDB-GENE-041212-84]
93. smarcd3b ENSDARG00000019969 11 1 1.000 - - - - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3b [Source:ZFIN;Acc:ZDB-GENE-080509-2]
94. RGS9BP ENSDARG00000086756 65 1 1.000 - - - - - - - - regulator of G protein signaling 9 binding protein [Source:HGNC Symbol;Acc:HGNC:30304]
95. sowah1 sowah1 1 1 1.000 - - - - - - - -
96. MDH1B ENSDARG00000018008 29 1 1.000 - - - - - - - - malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
97. si:ch211-266l9.1 si:ch211-266l9.1 18 1 1.000 - - - - - - - -
98. lpar6b ENSDARG00000069441 65 1 1.000 - - - - - - - - lysophosphatidic acid receptor 6b [Source:ZFIN;Acc:ZDB-GENE-110408-67]
99. trib1 ENSDARG00000110963 1 1 1.000 - - - - - - - - tribbles pseudokinase 1 [Source:ZFIN;Acc:ZDB-GENE-091207-4]
100. l3mbtl3 ENSDARG00000025983 12 1 1.000 - - - - - - - - l(3)mbt-like 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040724-127]

There are 431 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA