Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-161j23.5

Gene Name Gene ID Reads Annotation
si:dkey-161j23.5 ENSDARG00000094441 11 si:dkey-161j23.5 [Source:ZFIN;Acc:ZDB-GENE-091204-373]










Genes with expression patterns similar to si:dkey-161j23.5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-161j23.5 ENSDARG00000094441 11 7 1.000 1.000 1.000 1.000 1.000 - - 1.000 1.000 si:dkey-161j23.5 [Source:ZFIN;Acc:ZDB-GENE-091204-373]
2. cx52.9 ENSDARG00000086453 7 2 1.000 - - - 1.000 - - - - connexin 52.9 [Source:ZFIN;Acc:ZDB-GENE-040426-2421]
3. RBM11 ENSDARG00000090202 15 2 1.000 - - - 1.000 - - - - RNA binding motif protein 11 [Source:ZFIN;Acc:ZDB-GENE-091204-317]
4. ntf7 ntf7 72 1.962 1.000 0.962 - - - - - - -
5. si:ch211-223a21.3 ENSDARG00000104737 28 1.962 1.000 0.962 - - - - - - - si:ch211-223a21.3 [Source:ZFIN;Acc:ZDB-GENE-110913-50]
6. zgc:172253 ENSDARG00000074191 5 1.924 - - - 0.924 1.000 - - - - zgc:172253 [Source:ZFIN;Acc:ZDB-GENE-080215-9]
7. MDFI ENSDARG00000089564 8 1.9 1.000 0.900 - - - - - - - MyoD family inhibitor [Source:HGNC Symbol;Acc:HGNC:6967]
8. wasa ENSDARG00000015149 26 1.883 - 0.942 - - - - - - 0.941 Wiskott-Aldrich syndrome (eczema-thrombocytopenia) a [Source:ZFIN;Acc:ZDB-GENE-081104-419]
9. ptger2b ENSDARG00000037033, ENSDARG00000116581 15 1.851 - - - 0.851 1.000 - - - - prostaglandin E receptor 2b (subtype EP2) [Source:ZFIN;Acc:ZDB-GENE-040724-267]
10. btr16 ENSDARG00000028850 21 1.841 - 0.900 - - - - - - 0.941 bloodthirsty-related gene family, member 16 [Source:ZFIN;Acc:ZDB-GENE-060929-1066]
11. CABZ01090980.1 CABZ01090980.1 6 1.812 - - - - 1.000 - - 0.812 -
12. si:dkey-233e3.5 si:dkey-233e3.5 7 1.777 - - 0.777 - 1.000 - - - -
13. cdk20 ENSDARG00000003867 27 1.756 1.000 - - - - - - - 0.756 cyclin-dependent kinase 20 [Source:ZFIN;Acc:ZDB-GENE-041212-84]
14. sfi1 ENSDARG00000053992 1075 1.733 0.872 0.861 - - - - - - - SFI1 centrin binding protein [Source:ZFIN;Acc:ZDB-GENE-080206-4]
15. st6galnac ENSDARG00000086292 29 1.725 0.825 0.900 - - - - - - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase [Source:ZFIN;Acc:ZDB-GENE-050309-58]
16. si:dkeyp-82h4.1 ENSDARG00000096463 18 1.717 1.000 - - 0.717 - - - - - si:dkeyp-82h4.1 [Source:ZFIN;Acc:ZDB-GENE-120709-49]
17. si:dkeyp-22c6.1 si:dkeyp-22c6.1 71 1.707 0.946 0.761 - - - - - - -
18. BX927317.2 ENSDARG00000101263 4 1.702 - - 0.702 - 1.000 - - - -
19. BX322657.1 ENSDARG00000102448 23 1.681 0.860 - - - 0.821 - - - -
20. zbtb3 ENSDARG00000036235 155 1.678 0.866 0.812 - - - - - - - zinc finger and BTB domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050506-105]
21. fgf11b ENSDARG00000043907 16 1.677 - 0.900 0.777 - - - - - - fibroblast growth factor 11b [Source:ZFIN;Acc:ZDB-GENE-100316-2]
22. si:ch211-194e1.8 si:ch211-194e1.8 14 1.676 - 0.855 - - - - - - 0.821
23. zgc:136872 ENSDARG00000008553 9 1.651 - 0.900 - - - - - - 0.751 zgc:136872 [Source:ZFIN;Acc:ZDB-GENE-060421-5204]
24. KDM4C ENSDARG00000061504, ENSDARG00000111347, ENSDARG00000114179 383 1.561 0.729 0.832 - - - - - - - lysine (K)-specific demethylase 4C [Source:ZFIN;Acc:ZDB-GENE-070209-38]
25. zgc:193801 ENSDARG00000076552 37 1.516 0.809 - - - - - - - 0.707 zgc:193801 [Source:ZFIN;Acc:ZDB-GENE-081022-40]
26. zgc:123248 zgc:123248 288 1.444 - 0.721 - - - - - - 0.723
27. CABZ01044085.1 CABZ01044085.1 3 1 1.000 - - - - - - - -
28. smad6b ENSDARG00000031763 12 1 1.000 - - - - - - - - SMAD family member 6b [Source:ZFIN;Acc:ZDB-GENE-050419-198]
29. si:dkey-57i11.4 si:dkey-57i11.4 0 1 - - - - 1.000 - - - -
30. eva1bb ENSDARG00000100698 223 1 1.000 - - - - - - - - eva-1 homolog Bb (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-080204-108]
31. ddhd1b ENSDARG00000037042, ENSDARG00000111543, ENSDARG00000113512 12 1 - - - - 1.000 - - - - DDHD domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-040724-18]
32. cnn1b ENSDARG00000102398 40 1 - - - - 1.000 - - - - calponin 1, basic, smooth muscle, b [Source:ZFIN;Acc:ZDB-GENE-091118-54]
33. si:dkey-3h3.3 ENSDARG00000067718 225 1 1.000 - - - - - - - - si:dkey-3h3.3 [Source:ZFIN;Acc:ZDB-GENE-060526-299]
34. iffo1a ENSDARG00000062976 5 1 - - - - 1.000 - - - - intermediate filament family orphan 1a [Source:ZFIN;Acc:ZDB-GENE-060503-418]
35. pabpn1l ENSDARG00000087996, ENSDARG00000113382 40 1 1.000 - - - - - - - - poly(A) binding protein, nuclear 1-like (cytoplasmic) [Source:ZFIN;Acc:ZDB-GENE-080709-5]
36. spc24 ENSDARG00000093622 9 1 - - 1.000 - - - - - - SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-456]
37. ZSWIM2 ENSDARG00000075700 8 1 - - - - 1.000 - - - - zinc finger, SWIM-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-070719-8]
38. wu:fj39g12 ENSDARG00000043460 8 1 - - 1.000 - - - - - - wu:fj39g12 [Source:ZFIN;Acc:ZDB-GENE-030131-7901]
39. hook2 ENSDARG00000039309, ENSDARG00000099235 0 1 - - - - 1.000 - - - - hook microtubule-tethering protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1636]
40. BX465203.1 ENSDARG00000113985 8 1 1.000 - - - - - - - -
41. si:dkey-167k11.3 si:dkey-167k11.3 3 1 - - 1.000 - - - - - -
42. CU469509.3 CU469509.3 1 1 1.000 - - - - - - - -
43. si:dkeyp-116h7.2 si:dkeyp-116h7.2 7 1 1.000 - - - - - - - -
44. fam207a_1 ENSDARG00000071500 1 1 - - 1.000 - - - - - - family with sequence similarity 207, member A [Source:ZFIN;Acc:ZDB-GENE-060825-113]
45. TRIM14_8 TRIM14_8 5 1 1.000 - - - - - - - -
46. GMNC ENSDARG00000068719 28 1 1.000 - - - - - - - - geminin coiled-coil domain containing [Source:ZFIN;Acc:ZDB-GENE-121211-1]
47. adarb2 ENSDARG00000071823 1 1 - - 1.000 - - - - - - adenosine deaminase, RNA-specific, B2 (non-functional) [Source:ZFIN;Acc:ZDB-GENE-060503-160]
48. GMIP ENSDARG00000077249 43 1 1.000 - - - - - - - - GEM interacting protein [Source:ZFIN;Acc:ZDB-GENE-130530-823]
49. fam219b ENSDARG00000104637 3 1 - - - - 1.000 - - - - family with sequence similarity 219, member B [Source:ZFIN;Acc:ZDB-GENE-050327-82]
50. CABZ01067175.1 ENSDARG00000100401 0 1 - - - - 1.000 - - - - T-cell leukemia homeobox protein 3-like [Source:NCBI gene;Acc:100008066]
51. ONECUT3 ONECUT3 2 1 1.000 - - - - - - - -
52. BEGAIN_1 BEGAIN_1 7 1 - - - - 1.000 - - - -
53. or111-9 ENSDARG00000092238 0 1 - - - - 1.000 - - - - odorant receptor, family D, subfamily 111, member 9 [Source:ZFIN;Acc:ZDB-GENE-010308-11]
54. or125-2 ENSDARG00000094714 0 1 - - - - 1.000 - - - - odorant receptor, family E, subfamily 125, member 2 [Source:ZFIN;Acc:ZDB-GENE-070806-92]
55. CR848787.1 CR848787.1 2 1 - - 1.000 - - - - - -
56. smpd3 ENSDARG00000098226 1 1 - - 1.000 - - - - - - sphingomyelin phosphodiesterase 3, neutral [Source:ZFIN;Acc:ZDB-GENE-081104-280]
57. hcrt ENSDARG00000070932 4 1 1.000 - - - - - - - - hypocretin (orexin) neuropeptide precursor [Source:ZFIN;Acc:ZDB-GENE-040324-1]
58. si:dkey-92j16.1 si:dkey-92j16.1 1 1 - - - - 1.000 - - - -
59. ftr03 8 1 - - - - 1.000 - - - - finTRIM family, member 3
60. fkrp ENSDARG00000100467 0 1 - - 1.000 - - - - - - fukutin related protein [Source:ZFIN;Acc:ZDB-GENE-070412-4]
61. frmd4bb ENSDARG00000076496 18 1 - - 1.000 - - - - - - FERM domain containing 4Bb [Source:ZFIN;Acc:ZDB-GENE-100921-74]
62. trim35-23 ENSDARG00000102368, ENSDARG00000113611 1 1 - - 1.000 - - - - - - tripartite motif containing 35-23 [Source:ZFIN;Acc:ZDB-GENE-060503-295]
63. wisp2 ENSDARG00000077882 3 1 - - - - 1.000 - - - - WNT1 inducible signaling pathway protein 2 [Source:ZFIN;Acc:ZDB-GENE-060223-1]
64. si:ch211-201p7.9 si:ch211-201p7.9 2 1 - - - - 1.000 - - - -
65. BX088551.1 BX088551.1 0 1 - - 1.000 - - - - - -
66. hs3st4 ENSDARG00000052648 6 1 - - 1.000 - - - - - - heparan sulfate (glucosamine) 3-O-sulfotransferase 4 [Source:ZFIN;Acc:ZDB-GENE-070202-8]
67. LPL ENSDARG00000087697 18 1 1.000 - - - - - - - - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
68. plekha7b ENSDARG00000062220, ENSDARG00000110462 11 1 1.000 - - - - - - - - pleckstrin homology domain containing, family A member 7b [Source:ZFIN;Acc:ZDB-GENE-091014-2]
69. si:dkey-49n23.1 ENSDARG00000040920 3 1 - - - - 1.000 - - - - si:dkey-49n23.1 [Source:ZFIN;Acc:ZDB-GENE-050208-762]
70. lipt2 ENSDARG00000069852 14 1 - - - - 1.000 - - - - lipoyl(octanoyl) transferase 2 [Source:ZFIN;Acc:ZDB-GENE-060312-18]
71. ZNF608 3 1 - - 1.000 - - - - - - zinc finger protein 608, transcript variant X2
72. BX897747.2 BX897747.2 1 1 - - - - 1.000 - - - -
73. ttc12 ENSDARG00000056896 97 1 1.000 - - - - - - - - tetratricopeptide repeat domain 12 [Source:ZFIN;Acc:ZDB-GENE-071016-4]
74. si:ch211-253b18.3 si:ch211-253b18.3 4 1 - - - - 1.000 - - - -
75. si:dkey-22h13.5 0 1 - - - - 1.000 - - - - si:dkey-22h13.5, transcript variant X4
76. si:dkey-115f9.3 7 1 - - - - 1.000 - - - - si:dkey-115f9.3, transcript variant X2
77. CR848025.1 ENSDARG00000100501 35 1 - - - - 1.000 - - - - si:dkey-202l22.4 [Source:NCBI gene;Acc:101882714]
78. ms4a17a.2 ENSDARG00000105674 32 1 - - - - 1.000 - - - - membrane-spanning 4-domains, subfamily A, member 17a.2 [Source:ZFIN;Acc:ZDB-GENE-070705-367]
79. ltk ENSDARG00000042861, ENSDARG00000116109 76 1 1.000 - - - - - - - - leukocyte receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-030616-115]
80. si:dkey-219e20.2 ENSDARG00000094224 3 1 - - - - 1.000 - - - - si:dkey-219e20.2 [Source:ZFIN;Acc:ZDB-GENE-041001-105]
81. si:dkeyp-66a7.1 si:dkeyp-66a7.1 6 1 1.000 - - - - - - - -
82. mcm5_1 ENSDARG00000019507 10 1 1.000 - - - - - - - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
83. rln3a ENSDARG00000070780 2 1 - - 1.000 - - - - - - relaxin 3a [Source:ZFIN;Acc:ZDB-GENE-050310-3]
84. si:ch211-120c15.1 si:ch211-120c15.1 20 1 1.000 - - - - - - - -
85. si:dkey-31f5.8 ENSDARG00000094428 2 1 - - - - 1.000 - - - - si:dkey-31f5.8 [Source:ZFIN;Acc:ZDB-GENE-041210-182]
86. SNORD18_2 SNORD18_2 7 1 1.000 - - - - - - - -
87. syngr1b ENSDARG00000103577 3 1 - - - - 1.000 - - - - synaptogyrin 1b [Source:ZFIN;Acc:ZDB-GENE-090624-2]
88. pcdh1a6 ENSDARG00000097170 6 1 - - - - 1.000 - - - - protocadherin 1 alpha 6 [Source:ZFIN;Acc:ZDB-GENE-050203-2]
89. vtg2 ENSDARG00000055809, ENSDARG00000111529, ENSDARG00000114568 3 1 - - - - 1.000 - - - - vitellogenin 2 [Source:ZFIN;Acc:ZDB-GENE-001201-2]
90. ucn3l ENSDARG00000087241 29 1 1.000 - - - - - - - - urocortin 3, like [Source:ZFIN;Acc:ZDB-GENE-060130-250]
91. GIGYF1_2 GIGYF1_2 22 1 - - - - 1.000 - - - -
92. nsun5_1 ENSDARG00000043209 3 1 - - 1.000 - - - - - - NOP2/Sun domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2476]
93. si:dkey-284p5.3 ENSDARG00000095638 4 1 - - - - 1.000 - - - - si:dkey-284p5.3 [Source:ZFIN;Acc:ZDB-GENE-060503-352]
94. si:ch211-53m15.1 si:ch211-53m15.1 28 1 - - 1.000 - - - - - -
95. si:ch211-227e10.2 ENSDARG00000100414 1 1 - - - - 1.000 - - - - si:ch211-227e10.2 [Source:ZFIN;Acc:ZDB-GENE-050419-8]
96. BX324215.4 BX324215.4 3 1 1.000 - - - - - - - -
97. osmr ENSDARG00000100738 2 1 - - - - 1.000 - - - - oncostatin M receptor [Source:ZFIN;Acc:ZDB-GENE-060526-48]
98. rce1a ENSDARG00000077909 4 1 - - - - 1.000 - - - - Ras converting CAAX endopeptidase 1a [Source:ZFIN;Acc:ZDB-GENE-041008-116]
99. slc30a2 ENSDARG00000021305 4 1 - - 1.000 - - - - - - solute carrier family 30 (zinc transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-041014-347]
100. si:dkey-30c15.9 si:dkey-30c15.9 4 1 - - 1.000 - - - - - -

There are 970 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA