Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-197k17.3

Gene Name Gene ID Reads Annotation
si:ch211-197k17.3 ENSDARG00000096214 2 si:ch211-197k17.3 [Source:ZFIN;Acc:ZDB-GENE-110914-193]










Genes with expression patterns similar to si:ch211-197k17.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-197k17.3 ENSDARG00000096214 2 3 1.000 - - - 1.000 - - - 1.000 si:ch211-197k17.3 [Source:ZFIN;Acc:ZDB-GENE-110914-193]
2. pdcl ENSDARG00000009480 12 1.867 1.000 - - - - - - - 0.867 phosducin-like [Source:ZFIN;Acc:ZDB-GENE-030131-2365]
3. ndrg1b ENSDARG00000010420 116 1.796 1.000 - - - 0.796 - - - - N-myc downstream regulated 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1648]
4. ENSDARG00000088328 ENSDARG00000088328 2 1 - - - - - - - - 1.000
5. LPHN2_1 LPHN2_1 3 1 - - - - - - - - 1.000
6. fam178a fam178a 29 1 1.000 - - - - - - - -
7. htr2a htr2a 1 1 - - - - - - - - 1.000
8. nog2 ENSDARG00000043066 233 1 1.000 - - - - - - - - noggin 2 [Source:ZFIN;Acc:ZDB-GENE-991206-14]
9. gpr37l1b ENSDARG00000056774, ENSDARG00000114481 143 1 1.000 - - - - - - - - G protein-coupled receptor 37 like 1b [Source:ZFIN;Acc:ZDB-GENE-081104-324]
10. KCNT2 ENSDARG00000075812 23 1 1.000 - - - - - - - - potassium channel, subfamily T, member 2 [Source:ZFIN;Acc:ZDB-GENE-130530-783]
11. si:ch211-133l5.7 ENSDARG00000095633 3 1 1.000 - - - - - - - - si:ch211-133l5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-117]
12. EPM2AIP1 EPM2AIP1 4 1 1.000 - - - - - - - -
13. 5S_rRNA_31 5S_rRNA_31 3 1 1.000 - - - - - - - -
14. cryaba ENSDARG00000042621 2 1 1.000 - - - - - - - - crystallin, alpha B, a [Source:ZFIN;Acc:ZDB-GENE-991119-2]
15. si:ch211-169j7.3 si:ch211-169j7.3 4 1 - - - - - - - - 1.000
16. si:dkey-81i14.3 si:dkey-81i14.3 1 1 - - - - - - - - 1.000
17. si:dkey-222o15.3 si:dkey-222o15.3 3 1 - - - - - - - - 1.000
18. PLEKHG4B PLEKHG4B 1 1 1.000 - - - - - - - -
19. ubr1 ENSDARG00000060480 71 1 1.000 - - - - - - - - ubiquitin protein ligase E3 component n-recognin 1 [Source:ZFIN;Acc:ZDB-GENE-091110-2]
20. nrn1la ENSDARG00000069368, ENSDARG00000112044, ENSDARG00000112869 16 1 1.000 - - - - - - - - neuritin 1-like a [Source:NCBI gene;Acc:100004307]
21. si:ch211-196c10.13 ENSDARG00000096756 28 1 - - - - - - - - 1.000 si:ch211-196c10.13 [Source:ZFIN;Acc:ZDB-GENE-130603-71]
22. aspscr1_1 ENSDARG00000105321 4 1 1.000 - - - - - - - - alveolar soft part sarcoma chromosome region, candidate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-31]
23. plp1b ENSDARG00000011929 8 1 - - - - - - - - 1.000 proteolipid protein 1b [Source:ZFIN;Acc:ZDB-GENE-030710-6]
24. 5S_rRNA_27 5S_rRNA_27 2 1 - - - - - - - - 1.000
25. si:ch211-131e11.14 si:ch211-131e11.14 7 1 - - - - - - - - 1.000
26. SNORA53 SNORA53 10 1 - - - - - - - - 1.000
27. ABCD2 ENSDARG00000059409 1 1 - - - - - - - - 1.000 ATP-binding cassette, sub-family D (ALD), member 2 [Source:ZFIN;Acc:ZDB-GENE-050517-28]
28. U11 U11 11 1 - - - - - - - - 1.000
29. tdrd6 ENSDARG00000070052 1 1 - - - - - - - - 1.000 tudor domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-041001-210]
30. si:dkeyp-67a8.4 ENSDARG00000090099, ENSDARG00000092823 1 1 1.000 - - - - - - - - si:dkeyp-67a8.4 [Source:ZFIN;Acc:ZDB-GENE-070912-666]
31. si:dkey-47k16.3 si:dkey-47k16.3 17 1 - - - - - - - - 1.000
32. dnajb1b ENSDARG00000041394 25 1 - - - - - - - - 1.000 DnaJ (Hsp40) homolog, subfamily B, member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5455]
33. zgc:172128 ENSDARG00000101883, ENSDARG00000104208 28 1 1.000 - - - - - - - - zgc:172128 [Source:ZFIN;Acc:ZDB-GENE-080220-2]
34. TMEM100_1 TMEM100_1 44 1 1.000 - - - - - - - -
35. fam73b 76 1 1.000 - - - - - - - - family with sequence similarity 73, member B
36. taar13d ENSDARG00000110650 0 1 - - - - - - - - 1.000 trace amine associated receptor 13d [Source:ZFIN;Acc:ZDB-GENE-041014-62]
37. zgc:92658 8 1 - - - - - - - - 1.000 zgc:92658
38. fam101a 4 1 - - - - - - - - 1.000 family with sequence similarity 101, member A
39. zbtb32 ENSDARG00000073726 1 1 - - - - - - - - 1.000 zinc finger and BTB domain containing 32 [Source:ZFIN;Acc:ZDB-GENE-131121-166]
40. BX511182.1 BX511182.1 8 1 - - - - - - - - 1.000
41. si:dkey-88l16.3 ENSDARG00000094055 0 1 - - - - - - - - 1.000 si:dkey-88l16.3 [Source:ZFIN;Acc:ZDB-GENE-030131-6015]
42. C6H22orf23 C6H22orf23 15 1 - - - - - - - - 1.000
43. BX897747.1 ENSDARG00000117746 11 1 1.000 - - - - - - - -
44. zgc:112965 ENSDARG00000007787 5 1 1.000 - - - - - - - - zgc:112965 [Source:ZFIN;Acc:ZDB-GENE-050522-10]
45. si:ch211-122l24.2 si:ch211-122l24.2 1 1 1.000 - - - - - - - -
46. si:ch211-222b21.3 si:ch211-222b21.3 2 1 - - - - - - - - 1.000
47. CNTNAP1 ENSDARG00000074524 73 1 1.000 - - - - - - - - contactin associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030916-2]
48. syne2a_1 0 1 - - - - - - - - 1.000 spectrin repeat containing, nuclear envelope 2a
49. si:ch211-167j6.3 ENSDARG00000095504 5 1 1.000 - - - - - - - - si:ch211-167j6.3 [Source:ZFIN;Acc:ZDB-GENE-070912-145]
50. si:ch211-222k6.2 ENSDARG00000087046 144 1 1.000 - - - - - - - - si:ch211-222k6.2 [Source:ZFIN;Acc:ZDB-GENE-030131-9038]
51. CR942805.1 CR942805.1 94 1 - - - - - - - - 1.000
52. C20H2orf70 C20H2orf70 8 1 1.000 - - - - - - - -
53. CU638740.4 CU638740.4 1 1 - - - - - - - - 1.000
54. zgc:114081 ENSDARG00000057899, ENSDARG00000113048 5 1 1.000 - - - - - - - - zgc:114081 [Source:ZFIN;Acc:ZDB-GENE-050913-78]
55. fam196ab 2 1 - - - - - - - - 1.000 family with sequence similarity 196, member Ab
56. si:dkey-14d8.19 si:dkey-14d8.19 12 1 1.000 - - - - - - - -
57. cpne5 cpne5 16 1 1.000 - - - - - - - -
58. BX088525.2 ENSDARG00000117222 11 1 - - - - - - - - 1.000
59. TRIM46 TRIM46 73 1 1.000 - - - - - - - -
60. si:ch211-89f22.1 si:ch211-89f22.1 11 1 - - - - - - - - 1.000
61. si:dkey-241l7.2 ENSDARG00000105335 6 1 - - - - - - - - 1.000 si:dkey-241l7.2 [Source:ZFIN;Acc:ZDB-GENE-041014-240]
62. SIGLEC15 SIGLEC15 10 1 - - - - - - - - 1.000
63. si:dkey-43f9.1_1 si:dkey-43f9.1_1 3 1 - - - - - - - - 1.000
64. chrna9 ENSDARG00000054680 4 1 1.000 - - - - - - - - cholinergic receptor, nicotinic, alpha 9 [Source:ZFIN;Acc:ZDB-GENE-090312-63]
65. NUGGC NUGGC 9 1 - - - - - - - - 1.000
66. WDPCP ENSDARG00000074590 35 1 1.000 - - - - - - - - WD repeat containing planar cell polarity effector [Source:ZFIN;Acc:ZDB-GENE-100405-4]
67. si:dkey-47k16.1 si:dkey-47k16.1 5 1 - - - - - - - - 1.000
68. CLTCL1_2 CLTCL1_2 1 1 - - - - - - - - 1.000
69. si:ch73-119o17.1 si:ch73-119o17.1 6 1 - - - - - - - - 1.000
70. hel_dr4 hel_dr4 12 1 - - - - - - - - 1.000
71. ptcd2 ENSDARG00000035391, ENSDARG00000115227 15 1 - - - - 1.000 - - - - pentatricopeptide repeat domain 2 [Source:ZFIN;Acc:ZDB-GENE-050417-82]
72. six6a ENSDARG00000025187 40 1 1.000 - - - - - - - - SIX homeobox 6a [Source:ZFIN;Acc:ZDB-GENE-040426-1282]
73. BX324003.4 BX324003.4 24 1 - - - - - - - - 1.000
74. gpr12 ENSDARG00000062934 7 1 1.000 - - - - - - - - G protein-coupled receptor 12 [Source:ZFIN;Acc:ZDB-GENE-100209-3]
75. VWDE ENSDARG00000103443 10 1 - - - - - - - - 1.000 von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
76. CR391962.1 CR391962.1 31 1 1.000 - - - - - - - -
77. KSR1_1 KSR1_1 1 1 - - - - - - - - 1.000
78. zgc:173603 zgc:173603 2 1 - - - - - - - - 1.000
79. or115-8 ENSDARG00000092406 1 1 - - - - - - - - 1.000 odorant receptor, family F, subfamily 115, member 8 [Source:ZFIN;Acc:ZDB-GENE-070806-10]
80. CR848032.2 CR848032.2 0 1 - - - - - - - - 1.000
81. pou1f1 ENSDARG00000058924, ENSDARG00000110816, ENSDARG00000115109 17 1 - - - - - - - - 1.000 POU class 1 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040630-7]
82. si:dkey-11n6.3 si:dkey-11n6.3 1 1 - - - - - - - - 1.000
83. si:dkey-211i20.3 si:dkey-211i20.3 1 1 - - - - - - - - 1.000
84. gh1 ENSDARG00000038185 1 1 - - - - - - - - 1.000 growth hormone 1 [Source:ZFIN;Acc:ZDB-GENE-030725-2]
85. si:ch211-255f4.4 si:ch211-255f4.4 0 1 - - - - - - - - 1.000
86. si:dkey-233h12.3 si:dkey-233h12.3 4 1 - - - - - - - - 1.000
87. BX927122.1 ENSDARG00000100571 0 1 - - - - - - - - 1.000
88. si:dkey-208k22.1 si:dkey-208k22.1 1 1 - - - - - - - - 1.000
89. si:ch211-113a14.10 si:ch211-113a14.10 2 1 - - - - - - - - 1.000
90. AL935272.2 AL935272.2 37 1 1.000 - - - - - - - -
91. zgc:114037_4 57 1 1.000 - - - - - - - - zgc:114037
92. zp2.3 ENSDARG00000090237 45 1 - - - - - - - - 1.000 zona pellucida glycoprotein 2, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-010622-2]
93. GALNT9 ENSDARG00000006832 120 1 1.000 - - - - - - - - polypeptide N-acetylgalactosaminyltransferase 9 [Source:ZFIN;Acc:ZDB-GENE-060526-21]
94. UBE2O 1 1 - - - - - - - - 1.000 ubiquitin-conjugating enzyme E2O
95. taar16a ENSDARG00000054237 1 1 1.000 - - - - - - - - trace amine associated receptor 16a [Source:ZFIN;Acc:ZDB-GENE-100514-1]
96. prpf4 ENSDARG00000067639, ENSDARG00000114457, ENSDARG00000114653 10 1 1.000 - - - - - - - - PRP4 pre-mRNA processing factor 4 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-5143]
97. SNORD46 SNORD46 0 1 - - - - - - - - 1.000
98. lhfpl4b ENSDARG00000076943 0 1 - - - - - - - - 1.000 LHFPL tetraspan subfamily member 4b [Source:ZFIN;Acc:ZDB-GENE-110216-4]
99. COL18A1 COL18A1 0 1 - - - - - - - - 1.000
100. VDAC3 ENSDARG00000003695 34 1 - - - - 1.000 - - - - voltage-dependent anion channel 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2380]

There are 409 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA