Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-187d1.1

Gene Name Gene ID Reads Annotation
si:ch211-187d1.1 si:ch211-187d1.1 4










Genes with expression patterns similar to si:ch211-187d1.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-187d1.1 si:ch211-187d1.1 4 5 - - 1.000 1.000 - - 1.000 1.000 1.000
2. pnp4b ENSDARG00000029230 6 2 - - - - - - 1.000 - 1.000 purine nucleoside phosphorylase 4b [Source:ZFIN;Acc:ZDB-GENE-040426-1887]
3. DNM2 DNM2 2 2 - - 1.000 - - - 1.000 - -
4. ppm1na ENSDARG00000010231 3 2 - - - - - - 1.000 - 1.000 protein phosphatase, Mg2+/Mn2+ dependent, 1Na (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-2731]
5. oxtrl ENSDARG00000044175 10 1.97 - - - - - - 1.000 - 0.970 oxytocin receptor like [Source:ZFIN;Acc:ZDB-GENE-110805-1]
6. zgc:152698 32 1.956 - - 1.000 - - - - - 0.956 zgc:152698
7. CREB3L3 CREB3L3 24 1.852 - - - 0.852 - - - - 1.000
8. TMEM241 ENSDARG00000090685 11 1.852 - - - 0.852 - - - - 1.000 transmembrane protein 241 [Source:ZFIN;Acc:ZDB-GENE-131127-368]
9. dnah7 ENSDARG00000060165 21 1.852 - - - 0.852 - - 1.000 - - dynein, axonemal, heavy chain 7 [Source:ZFIN;Acc:ZDB-GENE-070912-282]
10. CLCN2 CLCN2 8 1.852 - - - 0.852 - - 1.000 - -
11. AL935141.5 AL935141.5 24 1.852 - - - 0.852 - - - - 1.000
12. si:dkey-27n6.5 23 1.817 - - 0.817 - - - 1.000 - - si:dkey-27n6.5
13. hsd3b1 ENSDARG00000069926 35 1.811 - - - 0.852 - - - - 0.959 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 [Source:ZFIN;Acc:ZDB-GENE-081105-30]
14. mirlet7a-6 15 1.808 - - - 0.852 - - 0.956 - - microRNA let7a-6
15. cabp5a ENSDARG00000002576 14 1.799 - - - - - - 1.000 0.799 - calcium binding protein 5a [Source:ZFIN;Acc:ZDB-GENE-040426-1655]
16. ZNF337_23 ZNF337_23 39 1.749 - - 0.749 - - - 1.000 - -
17. vipr1b ENSDARG00000059058 62 1.635 - - - - - - 0.809 - 0.826 vasoactive intestinal peptide receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050311-6]
18. efcab2 ENSDARG00000074323 88 1.539 - - - - - - 0.801 - 0.738 EF-hand calcium binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-070521-5]
19. si:dkey-14a7.4 si:dkey-14a7.4 5 1.482 - - 0.734 - - - 0.748 - -
20. si:ch73-94f11.5 si:ch73-94f11.5 6 1.418 - - 0.711 - - - - - 0.707
21. si:ch211-150o23.4 si:ch211-150o23.4 7 1 - - - - - - 1.000 - -
22. si:dkey-21p1.3 ENSDARG00000002295 1 1 - - - - - - - - 1.000 si:dkey-21p1.3 [Source:ZFIN;Acc:ZDB-GENE-081105-162]
23. taar19d ENSDARG00000115081 2 1 - - - - - - 1.000 - - trace amine associated receptor 19d [Source:ZFIN;Acc:ZDB-GENE-060413-18]
24. tlr5a ENSDARG00000044415 3 1 - - - - - - - - 1.000 toll-like receptor 5a [Source:ZFIN;Acc:ZDB-GENE-040219-14]
25. SOX8 SOX8 22 1 - - - - - - 1.000 - -
26. zgc:174698 ENSDARG00000075731, ENSDARG00000077266, ENSDARG00000098236 24 1 - - - - - - 1.000 - - zgc:174698 [Source:ZFIN;Acc:ZDB-GENE-080204-74]
27. mespab ENSDARG00000068761 1 1 - - - - - - - - 1.000 mesoderm posterior ab [Source:ZFIN;Acc:ZDB-GENE-090817-2]
28. zgc:175248 ENSDARG00000104153 1 1 - - - - - - 1.000 - - zgc:175248 [Source:ZFIN;Acc:ZDB-GENE-080204-93]
29. trpc2 trpc2 10 1 - - - - - - 1.000 - -
30. CR848787.1 CR848787.1 2 1 - - - - - - - - 1.000
31. DGKG ENSDARG00000062696 1 1 - - - - - - 1.000 - - diacylglycerol kinase, gamma [Source:ZFIN;Acc:ZDB-GENE-081105-39]
32. lrit1a ENSDARG00000019179 9 1 - - - - - - 1.000 - - leucine-rich repeat, immunoglobulin-like and transmembrane domains 1a [Source:ZFIN;Acc:ZDB-GENE-040924-5]
33. neurod6b ENSDARG00000020794 164 1 - - - - - - 1.000 - - neuronal differentiation 6b [Source:ZFIN;Acc:ZDB-GENE-010608-2]
34. rundc3b ENSDARG00000009961 10 1 - - - - - - 1.000 - - RUN domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-041114-121]
35. TRIM14_5 TRIM14_5 2 1 - - 1.000 - - - - - -
36. si:ch1073-155h21.1 ENSDARG00000007582 137 1 - - - - - - 1.000 - - si:ch1073-155h21.1 [Source:ZFIN;Acc:ZDB-GENE-030131-2664]
37. BX321871.2 BX321871.2 1 1 - - - - - - - - 1.000
38. rprma ENSDARG00000053383 12 1 - - - - - - 1.000 - - reprimo, TP53 dependent G2 arrest mediator candidate a [Source:ZFIN;Acc:ZDB-GENE-050522-218]
39. ENSDARG00000029805 ENSDARG00000029805 4 1 - - - - - - - - 1.000
40. aox1 aox1 14 1 - - - - - - 1.000 - -
41. FOLR1 FOLR1 25 1 - - - - - - 1.000 - -
42. si:dkey-10c21.1 ENSDARG00000079133 32 1 - - - - - - - - 1.000 si:dkey-10c21.1 [Source:ZFIN;Acc:ZDB-GENE-081104-302]
43. si:dkey-104n9.1 ENSDARG00000093042 41 1 - - - - - - 1.000 - - si:dkey-104n9.1 [Source:ZFIN;Acc:ZDB-GENE-081104-300]
44. MUC5B_1 MUC5B_1 7 1 - - - - - - 1.000 - -
45. NMI 3 1 - - - - - - 1.000 - - N-myc (and STAT) interactor
46. cfhl3 ENSDARG00000104205, ENSDARG00000115822 1 1 - - - - - - 1.000 - - complement factor H like 3 [Source:ZFIN;Acc:ZDB-GENE-050208-423]
47. HTRA2_2 HTRA2_2 1 1 - - - - - - 1.000 - -
48. si:ch211-203b20.4 ENSDARG00000091790 3 1 - - - - - - 1.000 - - si:ch211-203b20.4 [Source:ZFIN;Acc:ZDB-GENE-060503-208]
49. si:dkeyp-104f11.9 ENSDARG00000096715 81 1 - - 1.000 - - - - - - si:dkeyp-104f11.9 [Source:ZFIN;Acc:ZDB-GENE-130603-41]
50. ankrd37 ENSDARG00000056376 131 1 - - - - - - 1.000 - - ankyrin repeat domain 37 [Source:ZFIN;Acc:ZDB-GENE-070308-1]
51. slc34a1a ENSDARG00000028824 35 1 - - - - - - 1.000 - - solute carrier family 34 (type II sodium/phosphate cotransporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-101006-3]
52. si:dkey-21e13.3 ENSDARG00000096701 8 1 - - - - - - 1.000 - - si:dkey-21e13.3 [Source:ZFIN;Acc:ZDB-GENE-130531-75]
53. si:dkey-13m3.1 si:dkey-13m3.1 45 1 - - - - - - 1.000 - -
54. zgc:174153 ENSDARG00000079376 12007 1 - - - - - - 1.000 - - zgc:174153 [Source:ZFIN;Acc:ZDB-GENE-080215-7]
55. mgat3 mgat3 195 1 - - - - - - 1.000 - -
56. TMC5 ENSDARG00000013252 22 1 - - 1.000 - - - - - - transmembrane channel like 5 [Source:ZFIN;Acc:ZDB-GENE-120411-6]
57. CR339057.1 CR339057.1 7 1 - - - - - - 1.000 - -
58. si:dkey-121j17.5 ENSDARG00000014232 18 1 - - - - - - 1.000 - - si:dkey-121j17.5 [Source:ZFIN;Acc:ZDB-GENE-030131-4745]
59. grifin ENSDARG00000033382 141 1 - - - - - - 1.000 - - galectin-related inter-fiber protein [Source:ZFIN;Acc:ZDB-GENE-040801-163]
60. pla2g4a pla2g4a 7 1 - - - - - - 1.000 - -
61. si:dkey-277m11.2 ENSDARG00000094879 15 1 - - - - - - 1.000 - - si:dkey-277m11.2 [Source:ZFIN;Acc:ZDB-GENE-060526-285]
62. si:ch73-138e16.6 ENSDARG00000101044 2 1 - - 1.000 - - - - - - si:ch73-138e16.6 [Source:ZFIN;Acc:ZDB-GENE-070705-205]
63. CR759907.3 CR759907.3 3 1 - - - - - - 1.000 - -
64. CABZ01055343.1 CABZ01055343.1 12 1 - - - - - - 1.000 - -
65. si:dkey-265c15.5 si:dkey-265c15.5 1 1 - - - - - - 1.000 - -
66. si:dkeyp-70f9.7 ENSDARG00000042663 1 1 - - - - - - 1.000 - - si:dkeyp-70f9.7 [Source:ZFIN;Acc:ZDB-GENE-070705-550]
67. nr1d1 ENSDARG00000033160 3 1 - - 1.000 - - - - - - nuclear receptor subfamily 1, group d, member 1 [Source:ZFIN;Acc:ZDB-GENE-050105-1]
68. fam207a ENSDARG00000071500 106 1 - - - - - - 1.000 - - family with sequence similarity 207, member A [Source:ZFIN;Acc:ZDB-GENE-060825-113]
69. si:ch211-287c22.3 si:ch211-287c22.3 1 1 - - - - - - 1.000 - -
70. CR376787.1 CR376787.1 10 1 - - - - - - 1.000 - -
71. si:dkey-91i10.7 si:dkey-91i10.7 9 1 - - 1.000 - - - - - -
72. BX927369.5 BX927369.5 1 1 - - - - - - 1.000 - -
73. pdk2 pdk2 32 1 - - - - - - 1.000 - -
74. SNORD18_2 SNORD18_2 7 1 - - - - - - 1.000 - -
75. btr29 ENSDARG00000099138 5 1 - - - - - - 1.000 - - bloodthirsty-related gene family, member 29 [Source:ZFIN;Acc:ZDB-GENE-090512-2]
76. si:ch73-44m9.1 ENSDARG00000077115 3 1 - - 1.000 - - - - - - si:ch73-44m9.1 [Source:ZFIN;Acc:ZDB-GENE-081104-289]
77. slc6a19b ENSDARG00000056719 140 1 - - - - - - 1.000 - - solute carrier family 6 (neutral amino acid transporter), member 19b [Source:ZFIN;Acc:ZDB-GENE-030131-4755]
78. si:dkey-71p21.13 ENSDARG00000076139 1 1 - - - - - - 1.000 - - si:dkey-71p21.13 [Source:ZFIN;Acc:ZDB-GENE-090313-327]
79. RGS14 RGS14 15 1 - - - - - - 1.000 - -
80. C24H7orf10 C24H7orf10 7 1 - - - - - - - - 1.000
81. CR381673.2 ENSDARG00000103241 7 1 - - - - - - 1.000 - -
82. si:dkey-122c11.7 ENSDARG00000103721 3 1 - - - - - - 1.000 - - si:dkey-122c11.7 [Source:ZFIN;Acc:ZDB-GENE-110913-120]
83. LRIT3 LRIT3 12 1 - - - - - - 1.000 - -
84. slc5a12 ENSDARG00000005004 15 1 - - - - - - 1.000 - - solute carrier family 5 (sodium/monocarboxylate cotransporter), member 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1343]
85. CU856520.1 ENSDARG00000098941 2 1 - - - - - - - - 1.000
86. TRMT10B ENSDARG00000060176 13 1 - - - - - - 1.000 - - tRNA methyltransferase 10B [Source:ZFIN;Acc:ZDB-GENE-061013-313]
87. eif4e1b ENSDARG00000014565 12 1 - - - - - - - - 1.000 eukaryotic translation initiation factor 4E family member 1B [Source:ZFIN;Acc:ZDB-GENE-980526-127]
88. F2RL3 ENSDARG00000079399 29 1 - - - - - - 1.000 - - F2R like thrombin or trypsin receptor 3 [Source:HGNC Symbol;Acc:HGNC:3540]
89. c1qtnf5 ENSDARG00000056134 729 1 - - - - - - 1.000 - - C1q and TNF related 5 [Source:ZFIN;Acc:ZDB-GENE-050706-101]
90. CR388416.3 CR388416.3 1 1 - - - - - - 1.000 - -
91. dand5 ENSDARG00000036471 8 1 - - - - - - 1.000 - - DAN domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040421-2]
92. si:dkey-176f19.7 ENSDARG00000103348 10 1 - - - - - - 1.000 - - si:dkey-176f19.7 [Source:ZFIN;Acc:ZDB-GENE-110913-130]
93. si:ch211-202m22.1 ENSDARG00000094491 24 1 - - - - - - 1.000 - - si:ch211-202m22.1 [Source:ZFIN;Acc:ZDB-GENE-060531-31]
94. c6ast1 ENSDARG00000069216 8 1 - - - - - - - - 1.000 six-cysteine containing astacin protease 1 [Source:ZFIN;Acc:ZDB-GENE-070621-1]
95. or110-2 ENSDARG00000091172 1 1 - - 1.000 - - - - - - odorant receptor, family D, subfamily 110, member 2 [Source:ZFIN;Acc:ZDB-GENE-070806-76]
96. zgc:174356 ENSDARG00000088263, ENSDARG00000116818 6 1 - - - - - - 1.000 - - zgc:174356 [Source:ZFIN;Acc:ZDB-GENE-080215-21]
97. wasb ENSDARG00000026350 139 1 - - - - - - 1.000 - - Wiskott-Aldrich syndrome (eczema-thrombocytopenia) b [Source:ZFIN;Acc:ZDB-GENE-030131-7098]
98. ft2 ENSDARG00000109567 5 1 - - - - - - - - 1.000 alpha(1,3)fucosyltransferase gene 2 [Source:ZFIN;Acc:ZDB-GENE-990715-18]
99. ADAD1 ENSDARG00000089181 9 1 - - - - - - 1.000 - - adenosine deaminase domain containing 1 (testis-specific) [Source:ZFIN;Acc:ZDB-GENE-030131-6285]
100. cdca9 ENSDARG00000088639, ENSDARG00000113114 3 1 - - - - - - 1.000 - - cell division cycle associated 9 [Source:ZFIN;Acc:ZDB-GENE-090706-4]

There are 714 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA