Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-179l5.6

Gene Name Gene ID Reads Annotation
si:ch211-179l5.6 si:ch211-179l5.6 33










Genes with expression patterns similar to si:ch211-179l5.6

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-179l5.6 si:ch211-179l5.6 33 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. XCR1 XCR1 9 1.953 1.000 - 0.953 - - - - - -
3. si:ch211-204c5.6 si:ch211-204c5.6 7 1.901 1.000 - - - - - 0.901 - -
4. si:ch211-199o1.2 ENSDARG00000056210 33 1.89 0.989 - - - - - 0.901 - - si:ch211-199o1.2 [Source:ZFIN;Acc:ZDB-GENE-060503-867]
5. C9H3orf38 C9H3orf38 83 1.879 0.978 - - - - - 0.901 - -
6. ddhd1b ENSDARG00000037042, ENSDARG00000111543, ENSDARG00000113512 12 1.838 1.000 - 0.838 - - - - - - DDHD domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-040724-18]
7. stx11b.2 ENSDARG00000042231, ENSDARG00000110079 68 1.812 0.866 - - - - - 0.946 - - syntaxin 11b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-050417-148]
8. si:ch211-161h7.8 ENSDARG00000089919 60 1.81 1.000 - - - - 0.810 - - - si:ch211-161h7.8 [Source:ZFIN;Acc:ZDB-GENE-091204-302]
9. ADM ADM 122 1.789 - 0.979 - - 0.810 - - - -
10. zgc:153921_1 ENSDARG00000020738, ENSDARG00000038405 19 1.776 - - - - - - 0.901 - 0.875 zgc:153921 [Source:ZFIN;Acc:ZDB-GENE-060929-816]
11. antxr1a ENSDARG00000025672 32 1.756 - 0.803 0.953 - - - - - - ANTXR cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-110411-15]
12. ENSDARG00000091382 ENSDARG00000091382 4 1.747 - - 0.846 - - - 0.901 - -
13. CABZ01055343.1 CABZ01055343.1 12 1.715 1.000 - 0.715 - - - - - -
14. TRIM14_2 TRIM14_2 15 1.698 - - - 0.797 - - 0.901 - -
15. mitd1 ENSDARG00000044766 182 1.621 0.864 0.757 - - - - - - - MIT, microtubule interacting and transport, domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-923]
16. esr2a ENSDARG00000016454 23 1.61 - - - - - - 0.901 - 0.709 estrogen receptor 2a [Source:ZFIN;Acc:ZDB-GENE-030116-2]
17. BX005423.3 BX005423.3 33 1.609 - - - - 0.708 - 0.901 - -
18. KDM5A ENSDARG00000104567 450 1.6 - 0.773 - - - 0.827 - - - lysine (K)-specific demethylase 5A [Source:ZFIN;Acc:ZDB-GENE-150114-1]
19. acy3.1 ENSDARG00000093003 54 1.592 - 0.776 0.816 - - - - - - aspartoacylase (aminocyclase) 3, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040718-345]
20. slc25a48 ENSDARG00000021250 1057 1.58 - 0.842 - - - 0.738 - - - solute carrier family 25, member 48 [Source:ZFIN;Acc:ZDB-GENE-040718-60]
21. tsc22d3 ENSDARG00000075666, ENSDARG00000114324 613 1.573 - 0.806 - - - 0.767 - - - TSC22 domain family, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1433]
22. zgc:174273 zgc:174273 374 1.566 - 0.732 - - - 0.834 - - -
23. dhrs3a ENSDARG00000044982, ENSDARG00000109521 146 1.545 0.825 - - - - 0.720 - - - dehydrogenase/reductase (SDR family) member 3a [Source:ZFIN;Acc:ZDB-GENE-040801-217]
24. CR848836.5 CR848836.5 42 1.541 - - - - 0.763 0.778 - - -
25. spata20 ENSDARG00000013880 46 1.539 - - - - 0.757 - 0.782 - - spermatogenesis associated 20 [Source:ZFIN;Acc:ZDB-GENE-030131-7269]
26. baiap2a ENSDARG00000062799 231 1.516 - 0.790 - - - - 0.726 - - BAI1-associated protein 2a [Source:ZFIN;Acc:ZDB-GENE-060421-2756]
27. fpr1 ENSDARG00000042984 66 1.514 - - - - 0.737 0.777 - - - formyl peptide receptor 1 [Source:ZFIN;Acc:ZDB-GENE-121227-2]
28. mettl21a ENSDARG00000012051 86 1.5 - 0.718 - - - - 0.782 - - methyltransferase like 21A [Source:ZFIN;Acc:ZDB-GENE-050320-145]
29. alg11 ENSDARG00000031202, ENSDARG00000110001 308 1.496 - 0.716 - - - 0.780 - - - asparagine-linked glycosylation 11 (alpha-1,2-mannosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-030131-7282]
30. ism2 ism2 153 1.476 - 0.758 - - - 0.718 - - -
31. trim25 ENSDARG00000104396, ENSDARG00000110468, ENSDARG00000117057 262 1.47 - 0.733 - - - 0.737 - - - tripartite motif containing 25 [Source:ZFIN;Acc:ZDB-GENE-040426-797]
32. gabbr2 ENSDARG00000061042 122 1.451 0.713 0.738 - - - - - - - gamma-aminobutyric acid (GABA) B receptor, 2 [Source:ZFIN;Acc:ZDB-GENE-060503-620]
33. si:ch211-207d6.2 ENSDARG00000031658 93 1.433 - 0.726 - - - - 0.707 - - si:ch211-207d6.2 [Source:ZFIN;Acc:ZDB-GENE-070912-185]
34. si:ch73-91k6.1 18 1 1.000 - - - - - - - - si:ch73-91k6.1
35. entpd8 ENSDARG00000005565 18 1 1.000 - - - - - - - - ectonucleoside triphosphate diphosphohydrolase 8 [Source:ZFIN;Acc:ZDB-GENE-040724-142]
36. foxp3a ENSDARG00000055750 15 1 1.000 - - - - - - - - forkhead box P3a [Source:ZFIN;Acc:ZDB-GENE-061116-2]
37. zgc:172133 ENSDARG00000075248 6 1 1.000 - - - - - - - - zgc:172133 [Source:ZFIN;Acc:ZDB-GENE-080204-48]
38. RAP1GAP2 RAP1GAP2 52 1 1.000 - - - - - - - -
39. sema4ga ENSDARG00000076595 24 1 1.000 - - - - - - - - sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Ga [Source:ZFIN;Acc:ZDB-GENE-060503-381]
40. avpr2aa ENSDARG00000007436 43 1 1.000 - - - - - - - - arginine vasopressin receptor 2a, duplicate a [Source:ZFIN;Acc:ZDB-GENE-090313-344]
41. urgcp ENSDARG00000036767 6 1 1.000 - - - - - - - - upregulator of cell proliferation [Source:ZFIN;Acc:ZDB-GENE-120215-160]
42. SLC7A8 SLC7A8 25 1 1.000 - - - - - - - -
43. nefla ENSDARG00000057568 62 1 1.000 - - - - - - - - neurofilament, light polypeptide a [Source:ZFIN;Acc:ZDB-GENE-091117-1]
44. C8H12orf43 C8H12orf43 50 1 - - - - - - 1.000 - -
45. lctlb ENSDARG00000016337 35 1 1.000 - - - - - - - - lactase-like b [Source:ZFIN;Acc:ZDB-GENE-060503-93]
46. fam26f 595 1 1.000 - - - - - - - - family with sequence similarity 26, member F
47. si:ch211-271e10.1 ENSDARG00000095735 15 1 1.000 - - - - - - - - si:ch211-271e10.1 [Source:ZFIN;Acc:ZDB-GENE-060526-145]
48. si:ch73-303g23.4 si:ch73-303g23.4 386 1 1.000 - - - - - - - -
49. ush1c ENSDARG00000051876, ENSDARG00000112799 25 1 1.000 - - - - - - - - Usher syndrome 1C [Source:ZFIN;Acc:ZDB-GENE-060312-41]
50. CABZ01060296.1 CABZ01060296.1 9 1 1.000 - - - - - - - -
51. cldn11a ENSDARG00000020031 284 1 1.000 - - - - - - - - claudin 11a [Source:ZFIN;Acc:ZDB-GENE-040718-369]
52. zzef1 ENSDARG00000094380 4 1 1.000 - - - - - - - - zinc finger, ZZ-type with EF hand domain 1 [Source:ZFIN;Acc:ZDB-GENE-041222-2]
53. si:ch211-121a2.4 ENSDARG00000028541 40 1 - - - - - - 1.000 - - si:ch211-121a2.4 [Source:ZFIN;Acc:ZDB-GENE-070705-23]
54. BX511271.1 BX511271.1 22 1 1.000 - - - - - - - -
55. GPR35 GPR35 32 1 - - - - - - 1.000 - -
56. igfbp5a ENSDARG00000039264, ENSDARG00000111203 117 1 1.000 - - - - - - - - insulin-like growth factor binding protein 5a [Source:ZFIN;Acc:ZDB-GENE-070620-8]
57. anxa2b ENSDARG00000053625, ENSDARG00000116775, ENSDARG00000117092 55 1 1.000 - - - - - - - - annexin A2b [Source:ZFIN;Acc:ZDB-GENE-030131-1089]
58. atoh1b ENSDARG00000099564 494 1 1.000 - - - - - - - - atonal bHLH transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-041201-1]
59. cd79b ENSDARG00000104691 5 1 1.000 - - - - - - - - CD79b molecule, immunoglobulin-associated beta [Source:ZFIN;Acc:ZDB-GENE-121219-1]
60. trim62 ENSDARG00000060901 12 1 1.000 - - - - - - - - tripartite motif containing 62 [Source:ZFIN;Acc:ZDB-GENE-070112-502]
61. C11H3orf14 C11H3orf14 15 1 1.000 - - - - - - - -
62. C3H17orf104 C3H17orf104 16 1 1.000 - - - - - - - -
63. si:dkey-47k20.8 ENSDARG00000035214 4 1 1.000 - - - - - - - - si:dkey-47k20.8 [Source:ZFIN;Acc:ZDB-GENE-060503-359]
64. atoh1c ENSDARG00000039602 4 1 1.000 - - - - - - - - atonal bHLH transcription factor 1c [Source:ZFIN;Acc:ZDB-GENE-090805-1]
65. CU694807.2 CU694807.2 5 1 1.000 - - - - - - - -
66. pcsk5a ENSDARG00000067537 44 1 1.000 - - - - - - - - proprotein convertase subtilisin/kexin type 5a [Source:ZFIN;Acc:ZDB-GENE-060531-130]
67. CU856140.1 CU856140.1 4316 1 1.000 - - - - - - - -
68. ptk2ba ENSDARG00000022841 19 1 - 1.000 - - - - - - - protein tyrosine kinase 2 beta, a [Source:ZFIN;Acc:ZDB-GENE-080207-1]
69. CABZ01068324.1 CABZ01068324.1 4 1 1.000 - - - - - - - -
70. si:ch211-265m20.8 120 1 1.000 - - - - - - - - si:ch211-265m20.8, transcript variant X1
71. zgc:173594 57 1 1.000 - - - - - - - - zgc:173594
72. si:dkey-24p1.6 ENSDARG00000028784, ENSDARG00000097212 23 1 1.000 - - - - - - - - si:dkey-24p1.6 [Source:ZFIN;Acc:ZDB-GENE-060503-67]
73. ppa1a ENSDARG00000099933 31 1 1.000 - - - - - - - - pyrophosphatase (inorganic) 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1695]
74. Vault_1 Vault_1 6 1 1.000 - - - - - - - -
75. CR631122.1 ENSDARG00000044534 8 1 1.000 - - - - - - - - protein RD3-like [Source:NCBI gene;Acc:100149591]
76. si:dkeyp-9d4.2 ENSDARG00000029720 9 1 1.000 - - - - - - - - si:dkeyp-9d4.2 [Source:ZFIN;Acc:ZDB-GENE-090312-156]
77. ptger1b ENSDARG00000104847 91 1 1.000 - - - - - - - - prostaglandin E receptor 1b (subtype EP1) [Source:ZFIN;Acc:ZDB-GENE-100922-278]
78. CABZ01059408.1 ENSDARG00000116928 24 1 1.000 - - - - - - - -
79. ctdsplb ENSDARG00000062116 136 1 - - - - - - 1.000 - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like b [Source:ZFIN;Acc:ZDB-GENE-060929-488]
80. GPR156 ENSDARG00000086215 126 0.995 0.995 - - - - - - - - G protein-coupled receptor 156 [Source:ZFIN;Acc:ZDB-GENE-060201-2]
81. cd8a ENSDARG00000044797 7 0.993 0.993 - - - - - - - - CD8a molecule [Source:ZFIN;Acc:ZDB-GENE-060210-2]
82. ZDHHC1 ENSDARG00000077546 14 0.993 0.993 - - - - - - - - zinc finger, DHHC-type containing 1 [Source:ZFIN;Acc:ZDB-GENE-130925-1]
83. rin1a ENSDARG00000079095 99 0.992 - 0.992 - - - - - - - Ras and Rab interactor 1a [Source:ZFIN;Acc:ZDB-GENE-091204-129]
84. DPEP3 DPEP3 53 0.991 0.991 - - - - - - - -
85. CABZ01028403.1 CABZ01028403.1 48 0.99 0.990 - - - - - - - -
86. si:dkeyp-72e1.6 ENSDARG00000099877 126 0.99 0.990 - - - - - - - - si:dkeyp-72e1.6 [Source:ZFIN;Acc:ZDB-GENE-120215-228]
87. GPR78 GPR78 17 0.989 0.989 - - - - - - - -
88. KCNJ10 KCNJ10 62 0.988 0.988 - - - - - - - -
89. vipr1b ENSDARG00000059058 62 0.987 - 0.987 - - - - - - - vasoactive intestinal peptide receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050311-6]
90. SORT1 SORT1 33 0.986 0.986 - - - - - - - -
91. si:dkey-18j14.4 si:dkey-18j14.4 60 0.983 0.983 - - - - - - - -
92. CU929133.1 CU929133.1 94 0.982 0.982 - - - - - - - -
93. pik3cg ENSDARG00000017757 157 0.981 0.981 - - - - - - - - phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma [Source:ZFIN;Acc:ZDB-GENE-040426-2532]
94. FAM65C 127 0.981 0.981 - - - - - - - - family with sequence similarity 65, member C, transcript variant X2
95. GPR141_1 GPR141_1 33 0.981 0.981 - - - - - - - -
96. CR936408.1 ENSDARG00000078938 15 0.981 0.981 - - - - - - - - uncharacterized LOC799523 [Source:NCBI gene;Acc:799523]
97. olfml2bb ENSDARG00000021480 256 0.98 0.980 - - - - - - - - olfactomedin-like 2Bb [Source:ZFIN;Acc:ZDB-GENE-070912-266]
98. slc16a9a ENSDARG00000013926, ENSDARG00000113368 64 0.98 0.980 - - - - - - - - solute carrier family 16, member 9a [Source:ZFIN;Acc:ZDB-GENE-040426-1364]
99. si:ch211-113a14.29 48 0.979 0.979 - - - - - - - - si:ch211-113a14.29
100. nlgn4a 102 0.979 0.979 - - - - - - - - neuroligin 4a, transcript variant X1

There are 1065 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA