Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for atoh1b

Gene Name Gene ID Reads Annotation
atoh1b ENSDARG00000099564 494 atonal bHLH transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-041201-1]










Genes with expression patterns similar to atoh1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. atoh1b ENSDARG00000099564 494 7 1.000 - 1.000 1.000 1.000 1.000 - 1.000 1.000 atonal bHLH transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-041201-1]
2. nin ENSDARG00000060298 1558 3.36 - - 0.988 - 0.747 0.900 - - 0.725 ninein (GSK3B interacting protein) [Source:ZFIN;Acc:ZDB-GENE-070725-1]
3. CT990561.1 ENSDARG00000058284 566 3.289 - - - 0.704 0.918 0.939 - - 0.728 EPH receptor A5 [Source:NCBI gene;Acc:797595]
4. TMEM57 TMEM57 260 2.521 - - - - - 0.919 - 0.804 0.798
5. bcl11ab ENSDARG00000063153 3032 2.44 - - - 0.867 - 0.845 - - 0.728 B cell CLL/lymphoma 11Ab [Source:ZFIN;Acc:ZDB-GENE-061009-4]
6. arhgef2 ENSDARG00000075819 2173 2.2 - - - - - 0.780 - 0.714 0.706 rho/rac guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030717-1]
7. gak ENSDARG00000090654 695 1.91 - - 0.974 - - 0.936 - - - cyclin G associated kinase [Source:ZFIN;Acc:ZDB-GENE-041210-358]
8. GPR156 ENSDARG00000086215 126 1.875 0.995 - - - - 0.880 - - - G protein-coupled receptor 156 [Source:ZFIN;Acc:ZDB-GENE-060201-2]
9. ercc2 ENSDARG00000021985 678 1.866 - - 0.982 - - 0.884 - - - excision repair cross-complementation group 2 [Source:ZFIN;Acc:ZDB-GENE-040426-997]
10. syt11a ENSDARG00000057913 1145 1.856 - - 0.980 - - 0.876 - - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
11. cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 1.854 - - 0.937 - - 0.917 - - - cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]
12. si:dkey-23a23.3 ENSDARG00000088214 86 1.849 0.911 - - - - 0.938 - - - si:dkey-23a23.3 [Source:ZFIN;Acc:ZDB-GENE-110913-89]
13. mapk12b ENSDARG00000006409 2246 1.846 - - 0.955 - - 0.891 - - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
14. olig4 ENSDARG00000052610, ENSDARG00000116678 1704 1.828 - - - - 0.858 0.970 - - - oligodendrocyte transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-3580]
15. CT583625.2 ENSDARG00000094770 57 1.817 0.958 - - - - 0.859 - - - uncharacterized LOC108181196 [Source:NCBI gene;Acc:108181196]
16. tubgcp2 ENSDARG00000013079 1520 1.81 - - 0.975 - - 0.835 - - - tubulin, gamma complex associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-031118-150]
17. syn1 ENSDARG00000060368, ENSDARG00000111164 397 1.803 - - 0.978 - - 0.825 - - - synapsin I [Source:ZFIN;Acc:ZDB-GENE-081105-93]
18. WDFY3 ENSDARG00000078890 2092 1.798 - - 0.953 - - 0.845 - - - WD repeat and FYVE domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070705-153]
19. CR855306.1 ENSDARG00000099475 102 1.788 0.917 - - - - 0.871 - - -
20. dbpa ENSDARG00000063014 107 1.786 0.906 - - - - 0.880 - - - D site albumin promoter binding protein a [Source:ZFIN;Acc:ZDB-GENE-060503-802]
21. TCAIM ENSDARG00000079881 424 1.783 - - 0.979 - - 0.804 - - - T cell activation inhibitor, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-160113-67]
22. NUDT8 ENSDARG00000007722 329 1.78 - - 0.977 - - 0.803 - - - nudix (nucleoside diphosphate linked moiety X)-type motif 8 [Source:ZFIN;Acc:ZDB-GENE-061013-219]
23. ube3c ENSDARG00000035978, ENSDARG00000112229 787 1.779 - - 0.977 - - 0.802 - - - ubiquitin protein ligase E3C [Source:ZFIN;Acc:ZDB-GENE-040426-1211]
24. si:ch211-113e8.10 ENSDARG00000079631 498 1.765 0.954 - - - - 0.811 - - - si:ch211-113e8.10 [Source:ZFIN;Acc:ZDB-GENE-090313-11]
25. myo1b ENSDARG00000024694 1761 1.762 - - 0.978 - - 0.784 - - - myosin IB [Source:ZFIN;Acc:ZDB-GENE-030131-695]
26. TUB ENSDARG00000062165, ENSDARG00000111083 871 1.761 0.951 - - - - - - 0.810 - tubby bipartite transcription factor [Source:ZFIN;Acc:ZDB-GENE-121009-1]
27. LRFN2 118 1.76 - - - - - 0.928 - 0.832 - leucine rich repeat and fibronectin type III domain containing 2
28. VWA7 ENSDARG00000061462 816 1.749 - - - 0.829 - 0.920 - - - von Willebrand factor A domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-060503-234]
29. zbtb18 ENSDARG00000028228 3653 1.74 - - 0.980 - - 0.760 - - - zinc finger and BTB domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-73]
30. CU929133.1 CU929133.1 94 1.737 0.982 - - - - 0.755 - - -
31. ELOVL4 ELOVL4 3026 1.732 - - 0.981 - - - - - 0.751
32. zic5 ENSDARG00000016022 1034 1.731 - - - 0.851 - 0.880 - - - zic family member 5 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040622-1]
33. snx29 ENSDARG00000077317 239 1.728 0.908 - - - - 0.820 - - - sorting nexin 29 [Source:ZFIN;Acc:ZDB-GENE-121105-13]
34. cenpk ENSDARG00000039616 744 1.727 - - - 0.761 - 0.966 - - - centromere protein K [Source:ZFIN;Acc:ZDB-GENE-090313-204]
35. efna2 efna2 428 1.726 - - - 0.935 - 0.791 - - -
36. nf1b ENSDARG00000004184 548 1.724 - - 0.980 - - 0.744 - - - neurofibromin 1b [Source:ZFIN;Acc:ZDB-GENE-091111-4]
37. ARHGAP23 ARHGAP23 3946 1.718 - - 0.977 - - 0.741 - - -
38. bcl9 ENSDARG00000036687 1124 1.718 - - 0.976 - - 0.742 - - - B cell CLL/lymphoma 9 [Source:ZFIN;Acc:ZDB-GENE-090313-135]
39. arid1ab ENSDARG00000101891 1722 1.718 0.917 - - - - 0.801 - - - AT rich interactive domain 1Ab (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-030131-5725]
40. srp9 ENSDARG00000042851 3254 1.717 - - 0.869 - - 0.848 - - - signal recognition particle 9 [Source:ZFIN;Acc:ZDB-GENE-040426-1106]
41. f2rl2 ENSDARG00000090524 37 1.712 - - - - 0.794 0.918 - - - coagulation factor II (thrombin) receptor-like 2 [Source:ZFIN;Acc:ZDB-GENE-110127-4]
42. kcnj11l ENSDARG00000031438 369 1.712 - - - - - 0.969 - 0.743 - potassium inwardly-rectifying channel, subfamily J, member 11, like [Source:ZFIN;Acc:ZDB-GENE-050222-2]
43. zic1 ENSDARG00000015567 2520 1.709 - - - 0.814 - 0.895 - - - zic family member 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000208-4]
44. nxf1 ENSDARG00000055076 3251 1.703 - - 0.939 - - 0.764 - - - nuclear RNA export factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2585]
45. taf1 ENSDARG00000035330 912 1.703 0.728 - 0.975 - - - - - - TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-5576]
46. coe2 coe2 1633 1.701 - - 0.970 - - - - - 0.731
47. samd1b ENSDARG00000079062 280 1.7 0.907 - - - - 0.793 - - - sterile alpha motif domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-090313-2]
48. rfc1 ENSDARG00000054799 1416 1.697 - - 0.968 0.729 - - - - - replication factor C (activator 1) 1 [Source:ZFIN;Acc:ZDB-GENE-070410-99]
49. pou3f2a ENSDARG00000070220 817 1.697 - - 0.988 0.709 - - - - - POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
50. dnaja1l dnaja1l 1536 1.697 - - - - - 0.917 - 0.780 -
51. mapk8ip2 ENSDARG00000063157 467 1.696 - - - - - 0.909 - 0.787 - mitogen-activated protein kinase 8 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-326]
52. CAMK1 CAMK1 28 1.693 - - - - - 0.955 - 0.738 -
53. tmem231 ENSDARG00000042272 557 1.689 - - 0.977 - - - - 0.712 - transmembrane protein 231 [Source:ZFIN;Acc:ZDB-GENE-040426-1386]
54. sox2 ENSDARG00000070913 2763 1.686 - - - 0.716 - 0.970 - - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
55. ubtf ENSDARG00000035066 4070 1.686 - - 0.953 - - 0.733 - - - upstream binding transcription factor [Source:ZFIN;Acc:ZDB-GENE-030616-252]
56. SLC9B1 SLC9B1 137 1.676 - - - - - 0.907 - 0.769 -
57. gltpd1 gltpd1 377 1.674 0.900 - - - - 0.774 - - -
58. BX649494.1 BX649494.1 195 1.673 - - - 0.731 - 0.942 - - -
59. srsf1b ENSDARG00000017843 2760 1.67 - - 0.964 - - 0.706 - - - serine/arginine-rich splicing factor 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1467]
60. itpr3 ENSDARG00000061741, ENSDARG00000112936 707 1.667 0.908 - - - - 0.759 - - - inositol 1,4,5-trisphosphate receptor, type 3 [Source:ZFIN;Acc:ZDB-GENE-070605-1]
61. mn1b ENSDARG00000079248 882 1.664 - - - - - 0.863 - - 0.801 meningioma 1b [Source:ZFIN;Acc:ZDB-GENE-080917-23]
62. cyp26b1 ENSDARG00000077121 1364 1.664 - - - - 0.964 - - - 0.700 cytochrome P450, family 26, subfamily b, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2908]
63. tuba2 ENSDARG00000045014 1490 1.66 - - - - - 0.919 - - 0.741 tubulin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1970]
64. ap1s2 ENSDARG00000058504, ENSDARG00000114515 6499 1.659 - - 0.862 - - 0.797 - - - adaptor related protein complex 1 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5448]
65. ssbp3b ENSDARG00000030155 7163 1.654 - - 0.863 - - 0.791 - - - single stranded DNA binding protein 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2801]
66. carm1 ENSDARG00000018698 5599 1.652 - - 0.951 0.701 - - - - - coactivator-associated arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-77]
67. stoml1 ENSDARG00000062142, ENSDARG00000110862 113 1.65 - - - - - 0.942 - 0.708 - stomatin (EPB72)-like 1 [Source:ZFIN;Acc:ZDB-GENE-070209-241]
68. dnajc6 ENSDARG00000079891 438 1.647 - - - - - 0.902 - 0.745 - DnaJ (Hsp40) homolog, subfamily C, member 6 [Source:ZFIN;Acc:ZDB-GENE-080104-2]
69. si:dkey-192i18.3 si:dkey-192i18.3 47 1.646 0.895 - - 0.751 - - - - -
70. ptpro ENSDARG00000100422, ENSDARG00000110470 1850 1.645 - - - 0.707 - 0.938 - - - protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]
71. si:dkey-38p12.2 si:dkey-38p12.2 504 1.643 0.748 - - - - 0.895 - - -
72. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 1.643 - - - - - 0.941 - - 0.702 hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
73. MIS12 ENSDARG00000026454 649 1.641 - - - - - 0.927 - 0.714 - MIS12 kinetochore complex component [Source:ZFIN;Acc:ZDB-GENE-040426-1372]
74. plk1 ENSDARG00000058471, ENSDARG00000111745 7020 1.637 - - 0.781 - - 0.856 - - - polo-like kinase 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-021115-7]
75. bach2b ENSDARG00000004074 1079 1.634 - - - - - 0.896 - 0.738 - BTB and CNC homology 1, basic leucine zipper transcription factor 2b [Source:ZFIN;Acc:ZDB-GENE-041001-139]
76. zdhhc12b ENSDARG00000052787 43 1.63 - - - - - 0.904 - 0.726 - zinc finger, DHHC-type containing 12b [Source:ZFIN;Acc:ZDB-GENE-070705-356]
77. irx5a ENSDARG00000034043 1694 1.628 - - - 0.861 - 0.767 - - - iroquois homeobox 5a [Source:ZFIN;Acc:ZDB-GENE-010716-2]
78. ddb2 ENSDARG00000041140, ENSDARG00000114723 827 1.628 - - 0.767 - - 0.861 - - - damage-specific DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050419-169]
79. top1l ENSDARG00000070545 40529 1.627 - - 0.838 0.789 - - - - - DNA topoisomerase I, like [Source:ZFIN;Acc:ZDB-GENE-060616-217]
80. cldn5a ENSDARG00000043716 3865 1.625 - - 0.910 - - 0.715 - - - claudin 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2442]
81. nup210 ENSDARG00000063333 995 1.618 - - - - - 0.865 - 0.753 - nucleoporin 210 [Source:ZFIN;Acc:ZDB-GENE-050208-132]
82. zc4h2 ENSDARG00000015314, ENSDARG00000112180 5141 1.613 - - - - - 0.892 - 0.721 - zinc finger, C4H2 domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-2207]
83. spag1a ENSDARG00000004017 1140 1.607 0.718 - - - - 0.889 - - - sperm associated antigen 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9443]
84. znf592 ENSDARG00000060885 776 1.604 - - - - - 0.888 - 0.716 - zinc finger protein 592 [Source:ZFIN;Acc:ZDB-GENE-030131-9613]
85. slc29a1a ENSDARG00000101289 2074 1.604 - - - 0.868 - 0.736 - - - solute carrier family 29 (equilibrative nucleoside transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-050913-138]
86. ints3 ENSDARG00000016811 339 1.598 - - - 0.737 - 0.861 - - - integrator complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-060503-634]
87. GATAD2B ENSDARG00000005834 3855 1.589 - - 0.883 - - - - - 0.706 GATA zinc finger domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-060503-655]
88. tmem200a ENSDARG00000031540 52 1.584 0.882 - - - - 0.702 - - - transmembrane protein 200A [Source:ZFIN;Acc:ZDB-GENE-040724-81]
89. TTYH1 ENSDARG00000076804 399 1.579 - - - - - 0.877 - - 0.702 tweety family member 1 [Source:ZFIN;Acc:ZDB-GENE-100922-257]
90. gpr37l1a ENSDARG00000006079 422 1.577 - - - 0.755 0.822 - - - - G protein-coupled receptor 37 like 1a [Source:ZFIN;Acc:ZDB-GENE-110411-20]
91. dpysl5a ENSDARG00000011141 1827 1.577 - - - - - 0.827 - - 0.750 dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
92. epha4l ENSDARG00000010767 1184 1.573 - - - - 0.807 - - - 0.766 eph receptor A4, like [Source:ZFIN;Acc:ZDB-GENE-990415-61]
93. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 1.571 - - - 0.761 - - - - 0.810 leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
94. hmp19 2554 1.571 - - - - - 0.830 - - 0.741 HMP19 protein
95. SYMPK ENSDARG00000059553 1159 1.566 - - - - - 0.826 - - 0.740 symplekin [Source:ZFIN;Acc:ZDB-GENE-060526-361]
96. scrt1b ENSDARG00000040214, ENSDARG00000110984 533 1.561 - - - - 0.710 0.851 - - - scratch family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-050327-72]
97. si:ch211-11c15.3 si:ch211-11c15.3 1279 1.56 - - - - - 0.822 - - 0.738
98. nrxn2a ENSDARG00000061454 291 1.559 - - - - - 0.858 - - 0.701 neurexin 2a [Source:ZFIN;Acc:ZDB-GENE-070206-5]
99. LDLRAD4 LDLRAD4 1237 1.558 - - - - - 0.771 - - 0.787
100. st8sia2 ENSDARG00000018788 2183 1.557 - - - 0.790 - 0.767 - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]

There are 2065 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA