Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-171b20.3

Gene Name Gene ID Reads Annotation
si:ch211-171b20.3 ENSDARG00000094794 2 si:ch211-171b20.3 [Source:ZFIN;Acc:ZDB-GENE-091204-278]










Genes with expression patterns similar to si:ch211-171b20.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-171b20.3 ENSDARG00000094794 2 3 1.000 - - - 1.000 1.000 - - - si:ch211-171b20.3 [Source:ZFIN;Acc:ZDB-GENE-091204-278]
2. caps2 ENSDARG00000058486 4 2 1.000 - - - 1.000 - - - - calcyphosine 2 [Source:ZFIN;Acc:ZDB-GENE-091204-449]
3. ENSDARG00000089152 ENSDARG00000089152 12 2 1.000 - - - - 1.000 - - -
4. tpgs2 ENSDARG00000011926 48 1.959 0.959 - - - - 1.000 - - - tubulin polyglutamylase complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040704-49]
5. DEPDC7 19 1.774 0.774 - - - - 1.000 - - - DEP domain containing 7, transcript variant X1
6. zp2l1 ENSDARG00000055415, ENSDARG00000110573 2 1.753 1.000 - - - 0.753 - - - - zona pellucida glycoprotein 2, like 1 [Source:ZFIN;Acc:ZDB-GENE-060818-3]
7. si:dkey-118j18.3 si:dkey-118j18.3 4 1.753 - - - - 0.753 1.000 - - -
8. BX601644.1 ENSDARG00000090632 2 1.753 1.000 - - - 0.753 - - - - cytokine receptor-like factor 2 [Source:NCBI gene;Acc:100294510]
9. adam19b ENSDARG00000067545 162 1.493 0.700 - - - - 0.793 - - - ADAM metallopeptidase domain 19b [Source:ZFIN;Acc:ZDB-GENE-070705-541]
10. n6amt2 7 1 - - - - 1.000 - - - - N-6 adenine-specific DNA methyltransferase 2 (putative), transcript variant X1
11. fam228a ENSDARG00000042936, ENSDARG00000114092 30 1 1.000 - - - - - - - - family with sequence similarity 228, member A [Source:ZFIN;Acc:ZDB-GENE-041014-83]
12. HTR7 17 1 - - - - - 1.000 - - - 5-hydroxytryptamine receptor 7
13. SPAG16 7 1 1.000 - - - - - - - - sperm associated antigen 16
14. si:dkey-3b8.4 si:dkey-3b8.4 13 1 1.000 - - - - - - - -
15. si:ch1073-403i13.1 si:ch1073-403i13.1 1 1 - - - - - 1.000 - - -
16. si:dkey-259p7.1 si:dkey-259p7.1 59 1 1.000 - - - - - - - -
17. AHNAK2 AHNAK2 33 1 - - - - - 1.000 - - -
18. zgc:162879 ENSDARG00000074163 6 1 - - - - - 1.000 - - - zgc:162879 [Source:ZFIN;Acc:ZDB-GENE-070424-92]
19. klc4_1 ENSDARG00000086985 22 1 1.000 - - - - - - - - kinesin light chain 4 [Source:ZFIN;Acc:ZDB-GENE-050417-350]
20. cntn2 ENSDARG00000000472, ENSDARG00000110222 3 1 - - - - - 1.000 - - - contactin 2 [Source:ZFIN;Acc:ZDB-GENE-990630-12]
21. TMC2 TMC2 5 1 - - - - - 1.000 - - -
22. veph veph 3 1 - - - - - 1.000 - - -
23. EGR4_1 EGR4_1 14 1 - - - - - 1.000 - - -
24. sst2 ENSDARG00000014190 617 1 1.000 - - - - - - - - somatostatin 2 [Source:ZFIN;Acc:ZDB-GENE-010219-2]
25. CREM_1 CREM_1 9 1 - - - - - 1.000 - - -
26. si:dkey-247i3.1 ENSDARG00000076252 11 1 - - - - - 1.000 - - - si:dkey-247i3.1 [Source:ZFIN;Acc:ZDB-GENE-110913-84]
27. coch ENSDARG00000024032 7 1 - - - - - 1.000 - - - coagulation factor C homolog, cochlin (Limulus polyphemus) [Source:ZFIN;Acc:ZDB-GENE-030616-403]
28. BX548000.1 ENSDARG00000099044 45 1 1.000 - - - - - - - -
29. klhl42 ENSDARG00000006011 46 1 1.000 - - - - - - - - kelch-like family, member 42 [Source:ZFIN;Acc:ZDB-GENE-041210-190]
30. si:ch211-218c6.9 si:ch211-218c6.9 40 1 - - - - - 1.000 - - -
31. or125-4 ENSDARG00000095417 2 1 - - - - - 1.000 - - - odorant receptor, family E, subfamily 125, member 4 [Source:ZFIN;Acc:ZDB-GENE-070806-94]
32. CABZ01036951.1 CABZ01036951.1 71 1 - - - - - 1.000 - - -
33. crybb1l2 ENSDARG00000016793 723 1 1.000 - - - - - - - - crystallin, beta B1, like 2 [Source:ZFIN;Acc:ZDB-GENE-070822-18]
34. si:dkey-161j23.6 ENSDARG00000092347 0 1 - - - - - 1.000 - - - si:dkey-161j23.6 [Source:ZFIN;Acc:ZDB-GENE-091204-173]
35. tcf23 ENSDARG00000087381 6 1 1.000 - - - - - - - - transcription factor 23 [Source:ZFIN;Acc:ZDB-GENE-090806-5]
36. si:dkey-257e4.5 si:dkey-257e4.5 3 1 - - - - - 1.000 - - -
37. CABZ01113978.1 CABZ01113978.1 1 1 - - - - - 1.000 - - -
38. chrnb1l ENSDARG00000022532, ENSDARG00000113943, ENSDARG00000116196 3 1 - - - - - 1.000 - - - cholinergic receptor, nicotinic, beta 1 (muscle) like [Source:ZFIN;Acc:ZDB-GENE-060811-1]
39. ENDOD1_4 ENDOD1_4 2 1 - - - - - 1.000 - - -
40. arhgef19 ENSDARG00000078853 17 1 - - - - - 1.000 - - - Rho guanine nucleotide exchange factor (GEF) 19 [Source:ZFIN;Acc:ZDB-GENE-090313-243]
41. ft2 ENSDARG00000109567 5 1 1.000 - - - - - - - - alpha(1,3)fucosyltransferase gene 2 [Source:ZFIN;Acc:ZDB-GENE-990715-18]
42. elavl2 ENSDARG00000040732 44 1 - - - - - 1.000 - - - ELAV like neuron-specific RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040704-9]
43. C3H16orf89 C3H16orf89 449 1 1.000 - - - - - - - -
44. atp8b5a ENSDARG00000062040 1 1 - - - - - 1.000 - - - ATPase phospholipid transporting 8B5a [Source:ZFIN;Acc:ZDB-GENE-060531-48]
45. si:ch211-122l14.7 ENSDARG00000095576 5 1 - - - - - 1.000 - - - si:ch211-122l14.7 [Source:ZFIN;Acc:ZDB-GENE-041014-263]
46. col5a2b ENSDARG00000024847 17 1 - - - - - 1.000 - - - collagen, type V, alpha 2b [Source:ZFIN;Acc:ZDB-GENE-110406-2]
47. si:dkey-250k10.4 ENSDARG00000099751 2 1 - - - - - 1.000 - - - si:dkey-250k10.4 [Source:ZFIN;Acc:ZDB-GENE-120703-22]
48. si:dkey-37o8.1 ENSDARG00000071727 64 1 1.000 - - - - - - - - si:dkey-37o8.1 [Source:ZFIN;Acc:ZDB-GENE-030131-5667]
49. si:ch211-132b12.2 ENSDARG00000094946 15 1 - - - - - 1.000 - - - si:ch211-132b12.2 [Source:ZFIN;Acc:ZDB-GENE-050420-178]
50. rhof ENSDARG00000054389, ENSDARG00000111798 15 1 1.000 - - - - - - - - ras homolog family member F [Source:ZFIN;Acc:ZDB-GENE-050522-280]
51. CT027762.3_1 CT027762.3_1 62 1 1.000 - - - - - - - -
52. ngb ENSDARG00000053475, ENSDARG00000116651 33 1 - - - - - 1.000 - - - neuroglobin [Source:ZFIN;Acc:ZDB-GENE-011102-1]
53. SLC38A8 SLC38A8 17 1 1.000 - - - - - - - -
54. si:ch73-191k20.4 37 1 - - - - - 1.000 - - - si:ch73-191k20.4, transcript variant X1
55. si:ch211-113a14.15_1 2 1 - - - - - 1.000 - - - si:ch211-113a14.15
56. pi15b ENSDARG00000061292 1 1 - - - - - 1.000 - - - peptidase inhibitor 15b [Source:ZFIN;Acc:ZDB-GENE-070912-590]
57. si:dkey-32n7.8 ENSDARG00000090630 0 1 - - - - - 1.000 - - - si:dkey-32n7.8 [Source:ZFIN;Acc:ZDB-GENE-121214-326]
58. tor2a ENSDARG00000100559, ENSDARG00000115324 58 1 - - - - - 1.000 - - - torsin family 2, member A [Source:ZFIN;Acc:ZDB-GENE-050913-60]
59. C6H21orf58 C6H21orf58 14 1 1.000 - - - - - - - -
60. si:dkey-250k15.4 ENSDARG00000092169 19 1 - - - - - 1.000 - - - si:dkey-250k15.4 [Source:ZFIN;Acc:ZDB-GENE-100922-254]
61. zgc:110434 21 1 - - - - - 1.000 - - - zgc:110434
62. si:ch211-226h7.4 si:ch211-226h7.4 0 1 - - - - - 1.000 - - -
63. RIC3 ENSDARG00000105549 3 1 - - - - - 1.000 - - - RIC3 acetylcholine receptor chaperone [Source:HGNC Symbol;Acc:HGNC:30338]
64. CR854899.1 ENSDARG00000102357 8 1 - - - - - 1.000 - - -
65. pak1_1 ENSDARG00000103959 28 1 - - - - - 1.000 - - - p21 protein (Cdc42/Rac)-activated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030826-29]
66. si:ch211-223g7.7 si:ch211-223g7.7 1 1 - - - - - 1.000 - - -
67. ncf4 ENSDARG00000040812, ENSDARG00000110339 45 1 1.000 - - - - - - - - neutrophil cytosolic factor 4 [Source:ZFIN;Acc:ZDB-GENE-041124-1]
68. si:ch211-22k7.8 si:ch211-22k7.8 0 1 - - - - - 1.000 - - -
69. heatr1 ENSDARG00000099742 92 1 - - - - - 1.000 - - - HEAT repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6378]
70. ifnlr1 ENSDARG00000087131 73 1 - - - - - 1.000 - - - interferon lambda receptor 1 [Source:ZFIN;Acc:ZDB-GENE-071120-5]
71. cnot7 ENSDARG00000032116, ENSDARG00000115413 184 1 1.000 - - - - - - - - CCR4-NOT transcription complex, subunit 7 [Source:ZFIN;Acc:ZDB-GENE-061013-29]
72. fdx1b ENSDARG00000038956, ENSDARG00000113144 66 1 - - - - 1.000 - - - - ferredoxin 1b [Source:ZFIN;Acc:ZDB-GENE-060526-382]
73. kcnq2a ENSDARG00000075307 7 1 - - - - - 1.000 - - - potassium voltage-gated channel, KQT-like subfamily, member 2a [Source:ZFIN;Acc:ZDB-GENE-080220-37]
74. hp ENSDARG00000051890, ENSDARG00000095807 4 1 - - - - - 1.000 - - - haptoglobin [Source:ZFIN;Acc:ZDB-GENE-030131-1259]
75. vtg2 ENSDARG00000055809, ENSDARG00000111529, ENSDARG00000114568 3 1 - - - - - 1.000 - - - vitellogenin 2 [Source:ZFIN;Acc:ZDB-GENE-001201-2]
76. SYN3 0 1 - - - - - 1.000 - - - synapsin III
77. tcf3a ENSDARG00000005915 12 1 1.000 - - - - - - - - transcription factor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-51]
78. admb ENSDARG00000069027 67 1 1.000 - - - - - - - - adrenomedullin b [Source:ZFIN;Acc:ZDB-GENE-120221-6]
79. lmbrd2a ENSDARG00000099566 15 1 - - - - - 1.000 - - - LMBR1 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-050417-32]
80. p4ha1a ENSDARG00000033537, ENSDARG00000114754 38 1 - - - - - 1.000 - - - prolyl 4-hydroxylase, alpha polypeptide I a [Source:ZFIN;Acc:ZDB-GENE-040724-91]
81. rp1 ENSDARG00000077687 18 1 1.000 - - - - - - - - retinitis pigmentosa 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-070912-612]
82. chrna7 ENSDARG00000101702 50 1 1.000 - - - - - - - - cholinergic receptor, nicotinic, alpha 7 (neuronal) [Source:ZFIN;Acc:ZDB-GENE-040108-3]
83. bcl9l ENSDARG00000055054 128 1 1.000 - - - - - - - - B cell CLL/lymphoma 9-like [Source:ZFIN;Acc:ZDB-GENE-040927-29]
84. pth1b ENSDARG00000091961, ENSDARG00000115353 5 1 - - - - - 1.000 - - - parathyroid hormone 1b [Source:ZFIN;Acc:ZDB-GENE-040623-2]
85. CD53 CD53 108 1 1.000 - - - - - - - -
86. CABZ01078520.1 CABZ01078520.1 2 1 - - - - - 1.000 - - -
87. zgc:110353 ENSDARG00000039443 80 1 1.000 - - - - - - - - zgc:110353 [Source:ZFIN;Acc:ZDB-GENE-050417-310]
88. si:dkey-29f21.5 si:dkey-29f21.5 3 1 - - - - - 1.000 - - -
89. FRMPD2 ENSDARG00000074119 5 1 1.000 - - - - - - - - FERM and PDZ domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-110315-2]
90. si:ch1073-221c23.2 si:ch1073-221c23.2 17 1 - - - - - 1.000 - - -
91. aven ENSDARG00000002894 49 1 - - - - - 1.000 - - - apoptosis, caspase activation inhibitor [Source:ZFIN;Acc:ZDB-GENE-041001-171]
92. si:dkey-105n5.3 si:dkey-105n5.3 9 1 1.000 - - - - - - - -
93. BX569778.1 BX569778.1 36 1 1.000 - - - - - - - -
94. CABZ01049058.1 CABZ01049058.1 7 1 1.000 - - - - - - - -
95. tti2 ENSDARG00000073773 19 1 - - - - - 1.000 - - - TELO2 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-110411-25]
96. CR628395.1 ENSDARG00000116298 75 1 1.000 - - - - - - - -
97. ugt2b3 46 1 1.000 - - - - - - - - UDP glucuronosyltransferase 2 family, polypeptide B3
98. fbxo43 ENSDARG00000104186 40 1 - - - - - 1.000 - - - F-box protein 43 [Source:ZFIN;Acc:ZDB-GENE-040426-1645]
99. carm1l ENSDARG00000091531 13 1 - - - - - 1.000 - - - coactivator-associated arginine methyltransferase 1, like [Source:ZFIN;Acc:ZDB-GENE-090312-219]
100. PPFIBP1 PPFIBP1 46 1 - - - - - 1.000 - - -

There are 651 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA