Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch1073-221c23.2

Gene Name Gene ID Reads Annotation
si:ch1073-221c23.2 si:ch1073-221c23.2 17










Genes with expression patterns similar to si:ch1073-221c23.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch1073-221c23.2 si:ch1073-221c23.2 17 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. MSMP ENSDARG00000105581 254 2.256 - 0.721 - - - 0.791 - - 0.744 microseminoprotein, prostate associated [Source:HGNC Symbol;Acc:HGNC:29663]
3. ntsr1 ENSDARG00000077577, ENSDARG00000112950 14 2 - - - - - 1.000 1.000 - - neurotensin receptor 1 (high affinity) [Source:ZFIN;Acc:ZDB-GENE-090313-372]
4. zak_1 ENSDARG00000006978, ENSDARG00000044615 7 2 - 1.000 - - - - 1.000 - - sterile alpha motif and leucine zipper containing kinase AZK [Source:ZFIN;Acc:ZDB-GENE-070912-386]
5. ENSDARG00000089152 ENSDARG00000089152 12 2 - - - - - 1.000 1.000 - -
6. si:dkey-40j3.3 ENSDARG00000103597 5 2 - - 1.000 - - 1.000 - - - si:dkey-40j3.3 [Source:ZFIN;Acc:ZDB-GENE-110913-109]
7. CT573248.1 ENSDARG00000074029 10 1.982 - - - - 0.982 - 1.000 - -
8. AHNAK2 AHNAK2 33 1.963 - - - - 0.963 1.000 - - -
9. zgc:152951 ENSDARG00000068663, ENSDARG00000113135 22 1.879 - - - - - 0.879 1.000 - - zgc:152951 [Source:ZFIN;Acc:ZDB-GENE-060929-416]
10. fhl1a ENSDARG00000071498, ENSDARG00000115132 164 1.859 - 0.859 - - - 1.000 - - - four and a half LIM domains 1a [Source:ZFIN;Acc:ZDB-GENE-040206-1]
11. EGR4_1 EGR4_1 14 1.855 - - - 0.855 - 1.000 - - -
12. acoxl ENSDARG00000020149 14 1.844 - - 1.000 0.844 - - - - - acyl-CoA oxidase-like [Source:ZFIN;Acc:ZDB-GENE-081107-18]
13. si:dkey-27n6.9 51 1.843 - - - - 0.843 - 1.000 - - si:dkey-27n6.9, transcript variant X4
14. tpgs2 ENSDARG00000011926 48 1.833 - - - - 0.833 1.000 - - - tubulin polyglutamylase complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040704-49]
15. ak7b ENSDARG00000017023 25 1.809 - 1.000 - - 0.809 - - - - adenylate kinase 7b [Source:ZFIN;Acc:ZDB-GENE-050309-170]
16. cacna1i ENSDARG00000070522 1 1.757 - - - - - - 1.000 0.757 - calcium channel, voltage-dependent, T type, alpha 1I subunit [Source:ZFIN;Acc:ZDB-GENE-060503-324]
17. si:ch211-267e7.22 si:ch211-267e7.22 34 1.751 - - 0.751 - - - 1.000 - -
18. slc2a5 ENSDARG00000077875 5 1.747 - 0.747 - - - - 1.000 - - solute carrier family 2 (facilitated glucose/fructose transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060222-2]
19. C12H17orf70 C12H17orf70 25 1.747 - 0.747 - - - 1.000 - - -
20. adcyap1a ENSDARG00000004015 67 1.747 - 0.747 - - - - 1.000 - - adenylate cyclase activating polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-020809-4]
21. BX248582.3 BX248582.3 3 1.747 - 0.747 - - - - 1.000 - -
22. prph2a ENSDARG00000038018 2 1.747 - 0.747 - - - - 1.000 - - peripherin 2a (retinal degeneration, slow) [Source:ZFIN;Acc:ZDB-GENE-000616-8]
23. si:ch211-120c15.3 ENSDARG00000101807 19 1.747 - 0.747 - - - - 1.000 - - si:ch211-120c15.3 [Source:ZFIN;Acc:ZDB-GENE-110913-99]
24. si:ch73-62b13.1 ENSDARG00000093269 11 1.747 - 0.747 - - - - 1.000 - - si:ch73-62b13.1 [Source:ZFIN;Acc:ZDB-GENE-050420-366]
25. si:ch1073-185p12.2 ENSDARG00000100199 7 1.747 - 0.747 - - - 1.000 - - - si:ch1073-185p12.2 [Source:ZFIN;Acc:ZDB-GENE-110411-196]
26. CU694952.2 CU694952.2 3 1.747 - 0.747 - - - - 1.000 - -
27. taok3b ENSDARG00000094052 36 1.747 - 0.747 - - - - 1.000 - - TAO kinase 3b [Source:ZFIN;Acc:ZDB-GENE-060526-59]
28. mkks ENSDARG00000016139 70 1.747 - 0.747 - - - - 1.000 - - McKusick-Kaufman syndrome [Source:ZFIN;Acc:ZDB-GENE-040426-757]
29. si:ch211-195i24.1 si:ch211-195i24.1 10 1.747 - 0.747 - 1.000 - - - - -
30. CABZ01060813.1 CABZ01060813.1 12 1.747 - 0.747 - - - - 1.000 - -
31. CCNO 21 1.747 - 0.747 - - - - 1.000 - - cyclin O
32. chrnb1l ENSDARG00000022532, ENSDARG00000113943, ENSDARG00000116196 3 1.747 - 0.747 - - - 1.000 - - - cholinergic receptor, nicotinic, beta 1 (muscle) like [Source:ZFIN;Acc:ZDB-GENE-060811-1]
33. gria4a ENSDARG00000037496 88 1.732 - 0.747 - - - - 0.985 - - glutamate receptor, ionotropic, AMPA 4a [Source:ZFIN;Acc:ZDB-GENE-020125-7]
34. si:dkey-4i23.7 si:dkey-4i23.7 19 1.725 - 0.747 - - 0.978 - - - -
35. c1galt1a ENSDARG00000055585, ENSDARG00000112143 53 1.724 - - - - 0.724 - 1.000 - - core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1a [Source:ZFIN;Acc:ZDB-GENE-061013-303]
36. nudt6 ENSDARG00000103523 64 1.715 - 0.747 - - 0.968 - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 6 [Source:ZFIN;Acc:ZDB-GENE-070410-44]
37. hes2.2 ENSDARG00000068168 197 1.676 - - - - - 0.859 0.817 - - hes family bHLH transcription factor 2, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060825-55]
38. lppr4a lppr4a 141 1.666 - - - - - 0.770 - - 0.896
39. chrdl2 ENSDARG00000078916 9 1.662 - - - - 0.702 - - - 0.960 chordin-like 2 [Source:ZFIN;Acc:ZDB-GENE-081104-305]
40. BX649458.1 BX649458.1 166 1.659 - 0.846 - - - - 0.813 - -
41. ncam2 ENSDARG00000017466 175 1.653 - 0.747 - - 0.906 - - - - neural cell adhesion molecule 2 [Source:ZFIN;Acc:ZDB-GENE-010822-1]
42. CABZ01054394.1 ENSDARG00000090942 12 1.648 - 0.747 - 0.901 - - - - - gastrula zinc finger protein XlCGF26.1-like [Source:NCBI gene;Acc:101885996]
43. GLDC ENSDARG00000035120 112 1.648 - - - - - 0.820 - - 0.828 glycine dehydrogenase (decarboxylating) [Source:ZFIN;Acc:ZDB-GENE-030131-340]
44. phyhipla ENSDARG00000003998, ENSDARG00000115785 262 1.64 - 0.905 - - - - 0.735 - - phytanoyl-CoA 2-hydroxylase interacting protein-like a [Source:ZFIN;Acc:ZDB-GENE-061215-64]
45. fam45a ENSDARG00000062965, ENSDARG00000115900 14 1.638 - - - - - 0.710 - - 0.928 family with sequence similarity 45, member A [Source:ZFIN;Acc:ZDB-GENE-030131-3548]
46. zgc:162144 ENSDARG00000037603, ENSDARG00000109982 11 1.632 - - - 0.875 - - - 0.757 - zgc:162144 [Source:ZFIN;Acc:ZDB-GENE-030131-7630]
47. slmapb ENSDARG00000020764, ENSDARG00000117032 112 1.624 - 0.865 - - 0.759 - - - - sarcolemma associated protein b [Source:ZFIN;Acc:ZDB-GENE-040426-809]
48. zgc:193690 34 1.613 - 0.747 - - 0.866 - - - - zgc:193690
49. sema3c ENSDARG00000034300 881 1.609 - 0.905 - - - - 0.704 - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C [Source:ZFIN;Acc:ZDB-GENE-050513-5]
50. ccdc129 37 1.606 - 0.747 - - - 0.859 - - - coiled-coil domain containing 129, transcript variant X2
51. si:ch211-137i24.12 ENSDARG00000094537 35 1.605 - - - 0.763 - - 0.842 - - si:ch211-137i24.12 [Source:ZFIN;Acc:ZDB-GENE-060526-36]
52. si:dkey-19a16.2 ENSDARG00000058794 8 1.594 - - 0.735 - - 0.859 - - - si:dkey-19a16.2 [Source:ZFIN;Acc:ZDB-GENE-050208-493]
53. NTRK3 NTRK3 163 1.584 - - - - - 0.854 0.730 - -
54. fancc ENSDARG00000055232, ENSDARG00000116499 50 1.574 - - - - - - 0.702 - 0.872 FA complementation group C [Source:ZFIN;Acc:ZDB-GENE-060510-2]
55. bhlhe22 ENSDARG00000058039 1673 1.552 - 0.775 - - - - 0.777 - - basic helix-loop-helix family, member e22 [Source:ZFIN;Acc:ZDB-GENE-040426-1411]
56. lrrn3 lrrn3 137 1.541 - 0.747 - - - - 0.794 - -
57. sphkap ENSDARG00000017429 60 1.539 - 0.747 - - - - 0.792 - - SPHK1 interactor, AKAP domain containing [Source:ZFIN;Acc:ZDB-GENE-050419-32]
58. chst3a ENSDARG00000061070 127 1.533 - 0.774 - - - - 0.759 - - carbohydrate (chondroitin 6) sulfotransferase 3a [Source:ZFIN;Acc:ZDB-GENE-090312-180]
59. si:ch211-244b2.4 ENSDARG00000045530 32 1.522 - 0.811 - 0.711 - - - - - si:ch211-244b2.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8699]
60. C8H1orf173 C8H1orf173 10 1.511 - 0.747 0.764 - - - - - -
61. dclk1a ENSDARG00000018856 177 1.511 - - - - 0.720 - 0.791 - - doublecortin-like kinase 1a [Source:ZFIN;Acc:ZDB-GENE-061013-124]
62. GRIN3A ENSDARG00000075802 27 1.506 - 0.747 - - - - 0.759 - - glutamate receptor, ionotropic, N-methyl-D-aspartate 3A [Source:ZFIN;Acc:ZDB-GENE-130530-780]
63. CASS4 ENSDARG00000006775 760 1.502 - 0.755 - - - - - - 0.747 Cas scaffold protein family member 4 [Source:ZFIN;Acc:ZDB-GENE-110131-9]
64. gria3b ENSDARG00000037498, ENSDARG00000111839 2 1.482 - 0.747 0.735 - - - - - - glutamate receptor, ionotropic, AMPA 3b [Source:ZFIN;Acc:ZDB-GENE-030616-53]
65. CR848045.1 CR848045.1 459 1.48 - 0.732 - - - - 0.748 - -
66. ndel1a ENSDARG00000010953 292 1.474 - 0.761 - - - - 0.713 - - nudE neurodevelopment protein 1-like 1a [Source:ZFIN;Acc:ZDB-GENE-040115-2]
67. CR847511.1 CR847511.1 80 1.474 - - - - 0.754 0.720 - - -
68. mpz ENSDARG00000038609 1740 1.466 - 0.747 - - - - 0.719 - - myelin protein zero [Source:ZFIN;Acc:ZDB-GENE-010724-4]
69. grin1a ENSDARG00000027828 1327 1.464 - 0.723 - - - - 0.741 - - glutamate receptor, ionotropic, N-methyl D-aspartate 1a [Source:ZFIN;Acc:ZDB-GENE-051202-1]
70. rasl12 ENSDARG00000002701 66 1.455 - 0.747 - - - - - - 0.708 RAS-like, family 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1201]
71. cyr61l2 ENSDARG00000099985 725 1.411 - 0.701 - - - 0.710 - - - cysteine-rich, angiogenic inducer, 61 like 2 [Source:ZFIN;Acc:ZDB-GENE-060404-5]
72. smpdl3a ENSDARG00000053119 1 1 - - - - - - 1.000 - - sphingomyelin phosphodiesterase, acid-like 3A [Source:ZFIN;Acc:ZDB-GENE-050327-61]
73. C8H9orf172 C8H9orf172 113 1 - 1.000 - - - - - - -
74. b3gntl1 ENSDARG00000043431 50 1 - - - - - - 1.000 - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 [Source:ZFIN;Acc:ZDB-GENE-050913-133]
75. HEATR5B ENSDARG00000059116 3 1 - - - 1.000 - - - - - HEAT repeat containing 5B [Source:ZFIN;Acc:ZDB-GENE-130530-676]
76. ZNF337 ZNF337 3 1 - - - - - 1.000 - - -
77. SSBP2 ENSDARG00000099727 22 1 - - - - - - 1.000 - - single-stranded DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-090312-197]
78. lhx8a ENSDARG00000002330 25 1 - - - - - - 1.000 - - LIM homeobox 8a [Source:ZFIN;Acc:ZDB-GENE-031008-2]
79. CR936540.2 CR936540.2 4 1 - - - - - - 1.000 - -
80. FBXO16 ENSDARG00000033949 10 1 - - 1.000 - - - - - - F-box protein 16 [Source:ZFIN;Acc:ZDB-GENE-041015-747]
81. si:dkey-32n7.4 ENSDARG00000002956 3 1 - - 1.000 - - - - - - si:dkey-32n7.4 [Source:ZFIN;Acc:ZDB-GENE-110411-175]
82. gpr173 ENSDARG00000042922 238 1 - - - - - - 1.000 - - G protein-coupled receptor 173 [Source:ZFIN;Acc:ZDB-GENE-000710-1]
83. pgap1 ENSDARG00000062465 30 1 - - - - - - 1.000 - - post-GPI attachment to proteins 1 [Source:ZFIN;Acc:ZDB-GENE-090313-216]
84. UBE2O 1 1 - - 1.000 - - - - - - ubiquitin-conjugating enzyme E2O
85. tenc1a tenc1a 3 1 - - 1.000 - - - - - -
86. srd5a2a ENSDARG00000043587 21 1 - - 1.000 - - - - - - steroid-5-alpha-reductase, alpha polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-050417-199]
87. SNTB2 ENSDARG00000051763 2 1 - - - - - 1.000 - - - syntrophin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-131121-511]
88. CABZ01079804.1 ENSDARG00000117619 1 1 - - - - - 1.000 - - -
89. PEG3_34 PEG3_34 0 1 - - - - - 1.000 - - -
90. ENDOD1_7 ENDOD1_7 33 1 - - - - - - 1.000 - -
91. mir92b 95 1 - - - - - - 1.000 - - microRNA 92b
92. sstr3 ENSDARG00000014477 14 1 - - - - - - 1.000 - - somatostatin receptor 3 [Source:ZFIN;Acc:ZDB-GENE-061009-35]
93. smtlb ENSDARG00000017251 7 1 - - - - - - 1.000 - - somatolactin beta [Source:ZFIN;Acc:ZDB-GENE-060123-1]
94. tbxas1 ENSDARG00000002249 55 1 - - - - - - 1.000 - - thromboxane A synthase 1 (platelet) [Source:ZFIN;Acc:ZDB-GENE-030131-8805]
95. si:ch211-173n18.3 ENSDARG00000028478 8 1 - - - - - 1.000 - - - si:ch211-173n18.3 [Source:ZFIN;Acc:ZDB-GENE-120215-62]
96. SCARNA1 SCARNA1 0 1 - - 1.000 - - - - - -
97. sf3b3 ENSDARG00000103553 57 1 - - - - - - 1.000 - - splicing factor 3b, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2901]
98. HIST1H4J_4 HIST1H4J_4 9 1 - - - - - - 1.000 - -
99. arl11l arl11l 31 1 - - - - - - 1.000 - -
100. si:ch211-225h9.2 si:ch211-225h9.2 16 1 - - - - - 1.000 - - -

There are 1504 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA