Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-154o6.3

Gene Name Gene ID Reads Annotation
si:ch211-154o6.3 ENSDARG00000099846, ENSDARG00000112144 203 si:ch211-154o6.3 [Source:ZFIN;Acc:ZDB-GENE-030131-1030]










Genes with expression patterns similar to si:ch211-154o6.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-154o6.3 ENSDARG00000099846, ENSDARG00000112144 203 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-154o6.3 [Source:ZFIN;Acc:ZDB-GENE-030131-1030]
2. HMCES ENSDARG00000077471, ENSDARG00000110218, ENSDARG00000111784 242 1.719 - - - - - - 0.855 0.864 - 5-hydroxymethylcytosine binding, ES cell specific [Source:ZFIN;Acc:ZDB-GENE-070620-10]
3. Sep-10 Sep-10 440 1.669 - 0.820 - - - 0.849 - - -
4. CABZ01111926.1 CABZ01111926.1 249 1.651 0.868 - - - - 0.783 - - -
5. chordc1 chordc1 548 1.643 - - - - - 0.847 - 0.796 -
6. htra1b ENSDARG00000014907 146 1.626 - - - - - 0.776 - 0.850 - HtrA serine peptidase 1b [Source:ZFIN;Acc:ZDB-GENE-080219-7]
7. SHISA8 SHISA8 58 1.626 - 0.839 - - - - - - 0.787
8. si:ch211-149a19.3 ENSDARG00000079456 115 1.617 - - - - - 0.755 - 0.862 - si:ch211-149a19.3 [Source:ZFIN;Acc:ZDB-GENE-081104-128]
9. HHIPL2 ENSDARG00000060008 162 1.616 - 0.771 - - - - - 0.845 - HHIP-like 2 [Source:ZFIN;Acc:ZDB-GENE-131120-145]
10. cry1a cry1a 738 1.612 - - - - - - 0.849 0.763 -
11. ppm1db ENSDARG00000021380, ENSDARG00000112471, ENSDARG00000113667, ENSDARG00000116463 372 1.597 - 0.733 - - - - 0.864 - - protein phosphatase, Mg2+/Mn2+ dependent, 1Db [Source:ZFIN;Acc:ZDB-GENE-041114-27]
12. cers4a ENSDARG00000031387 19 1.584 - 0.720 - - - - - 0.864 - ceramide synthase 4a [Source:ZFIN;Acc:ZDB-GENE-020808-1]
13. myo3a ENSDARG00000010186 117 1.579 0.833 0.746 - - - - - - - myosin IIIA [Source:ZFIN;Acc:ZDB-GENE-041026-4]
14. DNAJB14 ENSDARG00000069996 144 1.578 - 0.789 - - - - - 0.789 - DnaJ (Hsp40) homolog, subfamily B, member 14 [Source:ZFIN;Acc:ZDB-GENE-061110-138]
15. TTF1_2 TTF1_2 26 1.575 - 0.720 - - - - - 0.855 -
16. zgc:110821 ENSDARG00000077085 210 1.574 - 0.802 - - - - - 0.772 - zgc:110821 [Source:ZFIN;Acc:ZDB-GENE-050227-8]
17. sybl1 ENSDARG00000030775, ENSDARG00000116685 201 1.572 - - - - - 0.746 - 0.826 - synaptobrevin-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1055]
18. DRD5 DRD5 142 1.571 - - - - - 0.833 - 0.738 -
19. ppp1r13bb ENSDARG00000009142 1175 1.564 0.852 - - - - - 0.712 - - protein phosphatase 1, regulatory subunit 13Bb [Source:ZFIN;Acc:ZDB-GENE-030131-4327]
20. pkmyt1 ENSDARG00000074730 213 1.556 - 0.723 - - - - - 0.833 - protein kinase, membrane associated tyrosine/threonine 1 [Source:ZFIN;Acc:ZDB-GENE-060810-80]
21. TNFRSF11B ENSDARG00000098377 98 1.552 - - - - - - - 0.823 0.729 tumor necrosis factor receptor superfamily, member 11b [Source:ZFIN;Acc:ZDB-GENE-081104-76]
22. dock9b ENSDARG00000016311 122 1.543 - - - - - - - 0.745 0.798 dedicator of cytokinesis 9b [Source:ZFIN;Acc:ZDB-GENE-090916-2]
23. rabl5 rabl5 245 1.536 - - - - - 0.814 0.722 - -
24. crfb8 crfb8 392 1.534 - 0.751 - - - - - 0.783 -
25. gnai2b ENSDARG00000017294 686 1.523 - 0.740 - - - - - 0.783 - guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5861]
26. xdh ENSDARG00000055240 250 1.522 - 0.779 - - - - - 0.743 - xanthine dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-070719-9]
27. CR855996.2 ENSDARG00000104450 310 1.516 - - - - - - 0.735 - 0.781 ATPase phospholipid transporting 8B5b [Source:NCBI gene;Acc:563450]
28. il17rd ENSDARG00000098359 1153 1.51 - 0.750 - - - - - 0.760 - interleukin 17 receptor D [Source:ZFIN;Acc:ZDB-GENE-020320-5]
29. fam160a2 ENSDARG00000078188 546 1.501 0.797 - - - - 0.704 - - - family with sequence similarity 160, member A2 [Source:ZFIN;Acc:ZDB-GENE-070912-291]
30. lrrfip1b ENSDARG00000095170 293 1.488 - 0.729 - - - - 0.759 - - leucine rich repeat (in FLII) interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-050208-324]
31. C7H7orf43 C7H7orf43 381 1.486 - 0.718 - - - - - 0.768 -
32. zgc:174315 ENSDARG00000079222 180 1.484 - 0.755 - - - 0.729 - - - zgc:174315 [Source:ZFIN;Acc:ZDB-GENE-080219-29]
33. FRRS1 FRRS1 80 1.483 - 0.720 - - - 0.763 - - -
34. si:ch211-236p5.3 ENSDARG00000086418 138 1.477 - - 0.730 - - 0.747 - - - si:ch211-236p5.3 [Source:ZFIN;Acc:ZDB-GENE-081028-31]
35. CABZ01032467.1 CABZ01032467.1 400 1.47 - - - - - - 0.737 0.733 -
36. mysm1 ENSDARG00000034693 291 1.47 - 0.742 - - - 0.728 - - - Myb-like, SWIRM and MPN domains 1 [Source:ZFIN;Acc:ZDB-GENE-041014-28]
37. prkab1a ENSDARG00000044183 264 1.462 - - - - - 0.715 0.747 - - protein kinase, AMP-activated, beta 1 non-catalytic subunit, a [Source:ZFIN;Acc:ZDB-GENE-040718-377]
38. PDXK PDXK 224 1.449 0.728 0.721 - - - - - - -
39. CABZ01041002.1 CABZ01041002.1 957 1.446 - 0.708 - - - - 0.738 - -
40. Sep-10_1 Sep-10_1 424 1.442 - 0.723 - - - - - 0.719 -
41. ect2 ENSDARG00000007278 1193 1.44 - - - - - 0.728 0.712 - - epithelial cell transforming 2 [Source:ZFIN;Acc:ZDB-GENE-040831-2]
42. chsy1 ENSDARG00000079027 455 1.439 - 0.735 0.704 - - - - - - chondroitin sulfate synthase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3127]
43. tram2 ENSDARG00000030092 1906 1.427 - - 0.725 - - - - 0.702 - translocation associated membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2024]
44. rassf10a 417 1.425 - - 0.710 - - - - 0.715 - Ras association (RalGDS/AF-6) domain family (N-terminal) member 10a
45. herpud1 ENSDARG00000024314 1207 1.418 - - - - - 0.706 - 0.712 - homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 [Source:ZFIN;Acc:ZDB-GENE-050913-47]
46. si:ch211-9d9.1 ENSDARG00000099839 75 1.413 - - - - - 0.710 - - 0.703 si:ch211-9d9.1 [Source:ZFIN;Acc:ZDB-GENE-030131-2657]
47. slc52a2 ENSDARG00000102035 57 0.923 0.923 - - - - - - - - solute carrier family 52 (riboflavin transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2552]
48. pgap1 ENSDARG00000062465 30 0.923 0.923 - - - - - - - - post-GPI attachment to proteins 1 [Source:ZFIN;Acc:ZDB-GENE-090313-216]
49. arl4ab ENSDARG00000033182, ENSDARG00000110649 181 0.915 - 0.915 - - - - - - - ADP-ribosylation factor-like 4ab [Source:ZFIN;Acc:ZDB-GENE-030219-167]
50. ccdc104 ccdc104 248 0.912 0.912 - - - - - - - -
51. tbc1d10a tbc1d10a 462 0.909 - - - - - 0.909 - - -
52. CDKN1C CDKN1C 667 0.902 - 0.902 - - - - - - -
53. smarcd2 ENSDARG00000088877 416 0.9 0.900 - - - - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 [Source:ZFIN;Acc:ZDB-GENE-080215-1]
54. gdf6a ENSDARG00000053479 121 0.897 - - - - - - - 0.897 - growth differentiation factor 6a [Source:ZFIN;Acc:ZDB-GENE-980526-373]
55. lhx2b ENSDARG00000031222 517 0.892 - - - - - 0.892 - - - LIM homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-051220-1]
56. enosf1 ENSDARG00000038359 209 0.89 - 0.890 - - - - - - - enolase superfamily member 1 [Source:ZFIN;Acc:ZDB-GENE-060929-780]
57. si:ch211-126i22.5 ENSDARG00000060911 209 0.888 - - - - - 0.888 - - - si:ch211-126i22.5 [Source:ZFIN;Acc:ZDB-GENE-091204-183]
58. slc25a15a ENSDARG00000063539 50 0.888 - - - - - - - 0.888 - solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15a [Source:ZFIN;Acc:ZDB-GENE-070112-1072]
59. FRRS1_1 FRRS1_1 831 0.888 0.888 - - - - - - - -
60. MAL_1 MAL_1 200 0.888 - - - - - - - 0.888 -
61. txnl4a ENSDARG00000036190 2048 0.885 - 0.885 - - - - - - - thioredoxin-like 4A [Source:ZFIN;Acc:ZDB-GENE-041010-25]
62. C19H18orf21 C19H18orf21 338 0.885 - - - - - - - 0.885 -
63. zgc:111868 ENSDARG00000099060 68 0.882 - - - - - 0.882 - - - zgc:111868 [Source:ZFIN;Acc:ZDB-GENE-050809-138]
64. CARD11 ENSDARG00000052741 249 0.881 - - - - - - - 0.881 - caspase recruitment domain family, member 11 [Source:ZFIN;Acc:ZDB-GENE-100219-1]
65. CU929133.1 CU929133.1 94 0.88 - - - - - - - 0.880 -
66. zgc:101640 733 0.878 0.878 - - - - - - - - zgc:101640, transcript variant X2
67. mfsd10 ENSDARG00000086786 304 0.877 - - - - - - - 0.877 - major facilitator superfamily domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-050417-154]
68. si:ch211-198d23.1 ENSDARG00000092574 104 0.874 - - - - - 0.874 - - - si:ch211-198d23.1 [Source:ZFIN;Acc:ZDB-GENE-081104-163]
69. c1qtnf3 c1qtnf3 387 0.873 - 0.873 - - - - - - -
70. CABZ01044023.1 ENSDARG00000117734 240 0.873 - - - - - - - 0.873 -
71. smarcal1 ENSDARG00000102265 1921 0.873 0.873 - - - - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 [Source:ZFIN;Acc:ZDB-GENE-041210-303]
72. si:dkey-106l3.7 ENSDARG00000093444 29 0.871 - - - - - - - 0.871 - si:dkey-106l3.7 [Source:ZFIN;Acc:ZDB-GENE-091204-216]
73. asb13b ENSDARG00000089833 251 0.87 0.870 - - - - - - - - ankyrin repeat and SOCS box containing 13b [Source:ZFIN;Acc:ZDB-GENE-091118-116]
74. CYP46A1 CYP46A1 16 0.87 - - - - - - - - 0.870
75. terf1 ENSDARG00000058710 317 0.87 - - - - - - - 0.870 - telomeric repeat binding factor (NIMA-interacting) 1 [Source:ZFIN;Acc:ZDB-GENE-090612-2]
76. msxa msxa 263 0.869 - - - - - - - 0.869 -
77. agpat9l ENSDARG00000006491, ENSDARG00000109952, ENSDARG00000112415 191 0.867 0.867 - - - - - - - - 1-acylglycerol-3-phosphate O-acyltransferase 9, like [Source:ZFIN;Acc:ZDB-GENE-060531-19]
78. chtf8 ENSDARG00000069045, ENSDARG00000115254 1525 0.866 - - - - - - - 0.866 - CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050419-148]
79. CU929089.1 CU929089.1 479 0.866 - - - - - 0.866 - - -
80. trim35-27 ENSDARG00000035009 62 0.866 - - - - - - - 0.866 - tripartite motif containing 35-27 [Source:ZFIN;Acc:ZDB-GENE-030131-6185]
81. fgf16 ENSDARG00000042233, ENSDARG00000110602 39 0.864 - - - - - - - 0.864 - fibroblast growth factor 16 [Source:ZFIN;Acc:ZDB-GENE-060427-3]
82. il17d ENSDARG00000010700, ENSDARG00000115462 102 0.864 - - - - - - - 0.864 - interleukin 17d [Source:ZFIN;Acc:ZDB-GENE-061031-4]
83. pus7l_1 ENSDARG00000069780 49 0.863 - - - - - - - 0.863 - pseudouridylate synthase 7, like [Source:ZFIN;Acc:ZDB-GENE-050419-188]
84. mns1 ENSDARG00000060169, ENSDARG00000110835 283 0.863 - - - - - - 0.863 - - meiosis-specific nuclear structural 1 [Source:ZFIN;Acc:ZDB-GENE-030521-42]
85. DVL3 1098 0.862 - 0.862 - - - - - - - dishevelled segment polarity protein 3
86. cstf1 ENSDARG00000044820 1663 0.862 - 0.862 - - - - - - - cleavage stimulation factor, 3' pre-RNA, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2958]
87. dixdc1a ENSDARG00000025302 716 0.861 - - - - - - 0.861 - - DIX domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030721-2]
88. RNF130 ENSDARG00000089767 559 0.861 - - - - - - - 0.861 - ring finger protein 130 [Source:ZFIN;Acc:ZDB-GENE-050522-525]
89. CABZ01069020.1 ENSDARG00000105806 19 0.861 - - - - - - - 0.861 - si:cabz01069020.1 [Source:NCBI gene;Acc:100332930]
90. rbbp8 ENSDARG00000043480 585 0.861 - - - - - - 0.861 - - retinoblastoma binding protein 8 [Source:ZFIN;Acc:ZDB-GENE-050220-14]
91. NMUR1 NMUR1 30 0.86 - - - - - - - 0.860 -
92. ms4a17a.2 ENSDARG00000105674 32 0.86 - - - - - - - 0.860 - membrane-spanning 4-domains, subfamily A, member 17a.2 [Source:ZFIN;Acc:ZDB-GENE-070705-367]
93. si:ch211-132g1.3 ENSDARG00000089477 769 0.859 - - - - - - - 0.859 - si:ch211-132g1.3 [Source:ZFIN;Acc:ZDB-GENE-090312-148]
94. TOR4A TOR4A 70 0.859 - - - - - 0.859 - - -
95. cdt1 ENSDARG00000051854 206 0.858 - - - - - - - 0.858 - chromatin licensing and DNA replication factor 1 [Source:ZFIN;Acc:ZDB-GENE-070111-1]
96. emp1 ENSDARG00000069632 251 0.858 - 0.858 - - - - - - - epithelial membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-070822-2]
97. CABZ01113899.1 CABZ01113899.1 11 0.858 - - - - - - - 0.858 -
98. CU638740.3 CU638740.3 164 0.858 - - - - - - - 0.858 -
99. traip ENSDARG00000011262 410 0.858 - - - - - - - 0.858 - TRAF-interacting protein [Source:ZFIN;Acc:ZDB-GENE-040801-30]
100. rxrba ENSDARG00000078954 85 0.857 - - - - - - - 0.857 - retinoid x receptor, beta a [Source:ZFIN;Acc:ZDB-GENE-980526-436]

There are 1042 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA