Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-14a17.7

Gene Name Gene ID Reads Annotation
si:ch211-14a17.7 ENSDARG00000038720, ENSDARG00000115206 1 si:ch211-14a17.7 [Source:ZFIN;Acc:ZDB-GENE-030616-590]










Genes with expression patterns similar to si:ch211-14a17.7

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-14a17.7 ENSDARG00000038720, ENSDARG00000115206 1 3 - - 1.000 1.000 1.000 - - - - si:ch211-14a17.7 [Source:ZFIN;Acc:ZDB-GENE-030616-590]
2. si:dkey-78k22.2 si:dkey-78k22.2 2 1.928 - - 0.928 1.000 - - - - -
3. aqp10a ENSDARG00000007086, ENSDARG00000112181 8 1.928 - - 0.928 - 1.000 - - - - aquaporin 10a [Source:ZFIN;Acc:ZDB-GENE-040718-40]
4. FNDC3B FNDC3B 2 1.859 - - 0.859 - 1.000 - - - -
5. si:ch211-233h19.2 ENSDARG00000042213 47 1.611 - - - 0.785 0.826 - - - - si:ch211-233h19.2 [Source:ZFIN;Acc:ZDB-GENE-061009-14]
6. CU694374.3 CU694374.3 28 1.459 - - 0.718 0.741 - - - - -
7. si:dkey-14a7.4 si:dkey-14a7.4 5 1 - - - - 1.000 - - - -
8. CABZ01060030.1 ENSDARG00000106579 55 1 - - - 1.000 - - - - - rho-related BTB domain-containing protein 2-like [Source:NCBI gene;Acc:100331257]
9. guca1c ENSDARG00000030758 9 1 - - - 1.000 - - - - - guanylate cyclase activator 1C [Source:ZFIN;Acc:ZDB-GENE-030829-1]
10. si:dkey-4c15.9 ENSDARG00000092152 1 1 - - - - 1.000 - - - - si:dkey-4c15.9 [Source:ZFIN;Acc:ZDB-GENE-050420-80]
11. dao.2 ENSDARG00000035603 8 1 - - - - 1.000 - - - - D-amino-acid oxidase, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2634]
12. SHISA7 SHISA7 1 1 - - - - 1.000 - - - -
13. si:dkey-11f4.14 ENSDARG00000098461 35 1 - - - - 1.000 - - - - si:dkey-11f4.14 [Source:ZFIN;Acc:ZDB-GENE-070912-355]
14. BX324198.1 BX324198.1 12 1 - - - - 1.000 - - - -
15. znf536 ENSDARG00000103648 6 1 - - - - 1.000 - - - - zinc finger protein 536 [Source:ZFIN;Acc:ZDB-GENE-030616-624]
16. C24H7orf10_1 C24H7orf10_1 0 1 - - - - 1.000 - - - -
17. zgc:114037_5 6 1 - - - 1.000 - - - - - zgc:114037
18. taf4b ENSDARG00000075732 3 1 - - - - 1.000 - - - - TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-070424-105]
19. si:dkey-155d18.1 1 1 - - - - 1.000 - - - - si:dkey-155d18.1
20. ZCCHC6 2 1 - - - - 1.000 - - - - zinc finger, CCHC domain containing 6
21. BX321875.3 ENSDARG00000112569 24 1 - - - 1.000 - - - - -
22. si:ch211-210g13.5 ENSDARG00000062575 1 1 - - - - 1.000 - - - - si:ch211-210g13.5 [Source:ZFIN;Acc:ZDB-GENE-030131-5675]
23. ZNF337_14 ZNF337_14 4 1 - - - - 1.000 - - - -
24. csrnp1b ENSDARG00000038429 10 1 - - - - 1.000 - - - - cysteine-serine-rich nuclear protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1515]
25. U6_7 U6_7 0 1 - - - - 1.000 - - - -
26. ryr2b ENSDARG00000003706 6 1 - - - 1.000 - - - - - ryanodine receptor 2b (cardiac) [Source:ZFIN;Acc:ZDB-GENE-061226-3]
27. VSIG10L ENSDARG00000089237 12 1 - - - - 1.000 - - - - V-set and immunoglobulin domain containing 10 like [Source:ZFIN;Acc:ZDB-GENE-131127-231]
28. gpr155a ENSDARG00000090804 27 1 - - - 1.000 - - - - - G protein-coupled receptor 155a [Source:ZFIN;Acc:ZDB-GENE-100922-89]
29. si:ch211-198o19.2 si:ch211-198o19.2 0 1 - - - 1.000 - - - - -
30. CABZ01090980.1 CABZ01090980.1 6 1 - - - - 1.000 - - - -
31. si:ch211-161m3.4 ENSDARG00000103375 10 1 - - - - 1.000 - - - - si:ch211-161m3.4 [Source:ZFIN;Acc:ZDB-GENE-110914-169]
32. inpp5k inpp5k 2 1 - - - 1.000 - - - - -
33. si:ch211-15p9.2 ENSDARG00000062241 1 1 - - - 1.000 - - - - - si:ch211-15p9.2 [Source:ZFIN;Acc:ZDB-GENE-060503-577]
34. MRC2 ENSDARG00000078135, ENSDARG00000111490 10 1 - - - - 1.000 - - - - mannose receptor, C type 2 [Source:ZFIN;Acc:ZDB-GENE-090915-5]
35. ONECUT2 ENSDARG00000090387 8 1 - - - 1.000 - - - - - one cut homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-120215-73]
36. GPX2 ENSDARG00000089149 10 1 - - - - 1.000 - - - - glutathione peroxidase 2 [Source:NCBI gene;Acc:100334384]
37. ptger2b ENSDARG00000037033, ENSDARG00000116581 15 1 - - - - 1.000 - - - - prostaglandin E receptor 2b (subtype EP2) [Source:ZFIN;Acc:ZDB-GENE-040724-267]
38. RBM11 ENSDARG00000090202 15 1 - - - - 1.000 - - - - RNA binding motif protein 11 [Source:ZFIN;Acc:ZDB-GENE-091204-317]
39. foxa_1 ENSDARG00000087094, ENSDARG00000110743, ENSDARG00000115019 1 1 - - - - 1.000 - - - - forkhead box A sequence [Source:ZFIN;Acc:ZDB-GENE-990415-76]
40. otogl ENSDARG00000088750 2 1 - - - - 1.000 - - - - otogelin-like [Source:ZFIN;Acc:ZDB-GENE-050419-93]
41. mir30b 4 1 - - - - 1.000 - - - - microRNA 30b
42. hyal6 ENSDARG00000038166, ENSDARG00000111343 2 1 - - - 1.000 - - - - - hyaluronoglucosaminidase 6 [Source:ZFIN;Acc:ZDB-GENE-070112-2372]
43. si:ch73-115f13.1 si:ch73-115f13.1 15 1 - - - - 1.000 - - - -
44. CABZ01084323.1 ENSDARG00000104937 5 1 - - - - 1.000 - - - - protein tyrosine phosphatase, receptor type D [Source:NCBI gene;Acc:100330629]
45. BX005421.6 BX005421.6 4 1 - - - 1.000 - - - - -
46. zgc:194659 ENSDARG00000079347 17 1 - - - - 1.000 - - - - zgc:194659 [Source:ZFIN;Acc:ZDB-GENE-081022-139]
47. FNDC7_2 FNDC7_2 18 1 - - - - 1.000 - - - -
48. FMNL1 FMNL1 7 1 - - - 1.000 - - - - -
49. AL929092.1_1 ENSDARG00000092217 3 1 - - - - 1.000 - - - -
50. GM2A ENSDARG00000088439 55 1 - - - 1.000 - - - - - GM2 ganglioside activator [Source:ZFIN;Acc:ZDB-GENE-050417-373]
51. zgc:158321 zgc:158321 1 1 - - - - 1.000 - - - -
52. guca1a ENSDARG00000010454 9 1 - - - - 1.000 - - - - guanylate cyclase activator 1A [Source:ZFIN;Acc:ZDB-GENE-011128-5]
53. top3b ENSDARG00000027586 8 1 - - - 1.000 - - - - - DNA topoisomerase III beta [Source:ZFIN;Acc:ZDB-GENE-070705-37]
54. si:dkey-111b14.1 si:dkey-111b14.1 3 1 - - - 1.000 - - - - -
55. si:dkey-85n7.7 ENSDARG00000095893 0 1 - - - - 1.000 - - - - si:dkey-85n7.7 [Source:ZFIN;Acc:ZDB-GENE-110408-52]
56. CABZ01112877.1 CABZ01112877.1 2 1 - - - - 1.000 - - - -
57. bard1 ENSDARG00000076733 40 1 - - - 1.000 - - - - - BRCA1 associated RING domain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5883]
58. ush2a ENSDARG00000029482 10 1 - - - - 1.000 - - - - Usher syndrome 2A (autosomal recessive, mild) [Source:ZFIN;Acc:ZDB-GENE-060503-794]
59. mtp 1 1 - - - 1.000 - - - - - microsomal triglyceride transfer protein
60. si:dkey-161j23.5 ENSDARG00000094441 11 1 - - - - 1.000 - - - - si:dkey-161j23.5 [Source:ZFIN;Acc:ZDB-GENE-091204-373]
61. arhgap23b ENSDARG00000026840 6 1 - - - 1.000 - - - - - Rho GTPase activating protein 23b [Source:ZFIN;Acc:ZDB-GENE-081031-78]
62. ZC3H7B_1 ZC3H7B_1 0 1 - - - - 1.000 - - - -
63. CABZ01056274.1 CABZ01056274.1 3 1 - - - - 1.000 - - - -
64. gna15.4 ENSDARG00000071416 2 1 - - - - 1.000 - - - - guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-050208-781]
65. itga6l ENSDARG00000056018 1 1 - - - - 1.000 - - - - integrin, alpha 6, like [Source:ZFIN;Acc:ZDB-GENE-040914-57]
66. wnt3a ENSDARG00000058822 5 1 - - - - 1.000 - - - - wingless-type MMTV integration site family, member 3A [Source:ZFIN;Acc:ZDB-GENE-001106-1]
67. ush1g ush1g 0 1 - - - - 1.000 - - - -
68. zgc:165627 zgc:165627 4 1 - - - - 1.000 - - - -
69. dcst2 ENSDARG00000088693 1 1 - - - 1.000 - - - - - DC-STAMP domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070809-6]
70. si:rp71-31c2.1 si:rp71-31c2.1 1 1 - - - - 1.000 - - - -
71. socs1a ENSDARG00000038095 20 1 - - - - 1.000 - - - - suppressor of cytokine signaling 1a [Source:ZFIN;Acc:ZDB-GENE-040801-205]
72. CT030048.2 CT030048.2 3 1 - - - - 1.000 - - - -
73. SYNPR ENSDARG00000037587 20 1 - - - - 1.000 - - - - synaptoporin [Source:HGNC Symbol;Acc:HGNC:16507]
74. slc18a2 ENSDARG00000015110, ENSDARG00000115207 6 1 - - 1.000 - - - - - - solute carrier family 18 (vesicular monoamine transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-080514-1]
75. BX005442.2 ENSDARG00000111949 0 1 - - - 1.000 - - - - -
76. abcc13 ENSDARG00000062519 2 1 - - - - 1.000 - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 13 [Source:ZFIN;Acc:ZDB-GENE-050517-26]
77. MYL2 MYL2 7 1 - - - 1.000 - - - - -
78. ZNF337_1 ZNF337_1 1 1 - - 1.000 - - - - - -
79. apnl ENSDARG00000090900 21 1 - - - - 1.000 - - - - actinoporin-like protein [Source:ZFIN;Acc:ZDB-GENE-030131-8907]
80. CU856681.1 CU856681.1 7 1 - - - - 1.000 - - - -
81. fam19a1 7 1 - - - - 1.000 - - - - family with sequence similarity 19 member A1, C-C motif chemokine like, transcript variant X5
82. FP103003.1_1 FP103003.1_1 6 1 - - - - 1.000 - - - -
83. ghrhr2 ENSDARG00000099218, ENSDARG00000113154 1 1 - - - - 1.000 - - - - growth hormone releasing hormone receptor 2 [Source:ZFIN;Acc:ZDB-GENE-121214-194]
84. si:ch211-251p5.6 si:ch211-251p5.6 0 1 - - - - 1.000 - - - -
85. U1_24 U1_24 0 1 - - - 1.000 - - - - -
86. U1_27 U1_27 0 1 - - - 1.000 - - - - -
87. pabpc1l ENSDARG00000002597, ENSDARG00000112364 3 1 - - - 1.000 - - - - - poly(A) binding protein, cytoplasmic 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-5836]
88. ca7 ENSDARG00000045139, ENSDARG00000113549 1 1 - - - - 1.000 - - - - carbonic anhydrase VII [Source:ZFIN;Acc:ZDB-GENE-040426-1786]
89. sstr3 ENSDARG00000014477 14 1 - - - - 1.000 - - - - somatostatin receptor 3 [Source:ZFIN;Acc:ZDB-GENE-061009-35]
90. Metazoa_SRP_4 Metazoa_SRP_4 0 1 - - - 1.000 - - - - -
91. CR626884.3 ENSDARG00000104648 1 1 - - - 1.000 - - - - -
92. CNGA1 3 1 - - - - 1.000 - - - - cyclic nucleotide gated channel alpha 1
93. asip asip 2 1 - - - - 1.000 - - - -
94. CU468142.1 CU468142.1 6 1 - - - 1.000 - - - - -
95. CABZ01089223.1 CABZ01089223.1 0 1 - - - - 1.000 - - - -
96. CT027705.3 CT027705.3 9 1 - - - - 1.000 - - - -
97. BX005256.5 BX005256.5 25 1 - - - - 1.000 - - - -
98. zgc:158654 19 1 - - - 1.000 - - - - - zgc:158654, transcript variant X1
99. si:ch211-218d20.10 si:ch211-218d20.10 4 1 - - - - 1.000 - - - -
100. U4_1 U4_1 2 1 - - - - 1.000 - - - -

There are 296 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA