Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for top3b

Gene Name Gene ID Reads Annotation
top3b ENSDARG00000027586 8 DNA topoisomerase III beta [Source:ZFIN;Acc:ZDB-GENE-070705-37]










Genes with expression patterns similar to top3b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. top3b ENSDARG00000027586 8 6 - - 1.000 1.000 1.000 1.000 1.000 - 1.000 DNA topoisomerase III beta [Source:ZFIN;Acc:ZDB-GENE-070705-37]
2. PGBD4_4 PGBD4_4 15 2 - - - - - 1.000 1.000 - -
3. si:dkeyp-3f10.17 ENSDARG00000087254 1 2 - - - - - 1.000 1.000 - - si:dkeyp-3f10.17 [Source:ZFIN;Acc:ZDB-GENE-081104-467]
4. IQGAP3 ENSDARG00000098650 5 2 - - - - 1.000 - - - 1.000 IQ motif containing GTPase activating protein 3 [Source:ZFIN;Acc:ZDB-GENE-160226-1]
5. zgc:171551 ENSDARG00000073708, ENSDARG00000111940 24 2 - - - - - 1.000 1.000 - - zgc:171551 [Source:ZFIN;Acc:ZDB-GENE-080220-8]
6. PLEKHS1_2 PLEKHS1_2 21 2 - - - - 1.000 - 1.000 - -
7. si:ch211-220b11.4 si:ch211-220b11.4 8 1.916 - - - - 0.916 1.000 - - -
8. si:ch211-105d18.7 si:ch211-105d18.7 6 1.914 - - - 1.000 - - 0.914 - -
9. KCNK17 ENSDARG00000105453 16 1.861 - - - - - 0.861 - - 1.000 potassium channel, subfamily K, member 17 [Source:ZFIN;Acc:ZDB-GENE-120113-3]
10. nub1 ENSDARG00000061417 33 1.858 - - - - - 0.954 0.904 - - negative regulator of ubiquitin-like proteins 1 [Source:ZFIN;Acc:ZDB-GENE-080212-11]
11. GM2A ENSDARG00000088439 55 1.845 - - - 1.000 - - 0.845 - - GM2 ganglioside activator [Source:ZFIN;Acc:ZDB-GENE-050417-373]
12. si:ch211-237l4.6 ENSDARG00000056915 49 1.785 - - - - - 0.871 0.914 - - si:ch211-237l4.6 [Source:ZFIN;Acc:ZDB-GENE-040724-42]
13. si:ch211-233h19.2 ENSDARG00000042213 47 1.785 - - - 0.785 - - 1.000 - - si:ch211-233h19.2 [Source:ZFIN;Acc:ZDB-GENE-061009-14]
14. CU104716.2 CU104716.2 10 1.781 - - - - 0.781 - 1.000 - -
15. TMBIM1 TMBIM1 2 1.772 - - - - - 1.000 - - 0.772
16. si:ch211-190k17.13 si:ch211-190k17.13 48 1.769 - - - 0.769 - - 1.000 - -
17. si:ch73-248e21.5 ENSDARG00000088283 19 1.723 - - - - - - 1.000 - 0.723 si:ch73-248e21.5 [Source:ZFIN;Acc:ZDB-GENE-120215-255]
18. gsto1 ENSDARG00000022183 13 1.72 - - - - 0.962 - 0.758 - - glutathione S-transferase omega 1 [Source:ZFIN;Acc:ZDB-GENE-040718-365]
19. avpr2aa ENSDARG00000007436 43 1.713 - - - 0.713 - - 1.000 - - arginine vasopressin receptor 2a, duplicate a [Source:ZFIN;Acc:ZDB-GENE-090313-344]
20. si:dkey-86e18.1 ENSDARG00000043536 75 1.621 - - - - - 0.717 0.904 - - si:dkey-86e18.1 [Source:ZFIN;Acc:ZDB-GENE-041014-18]
21. ENSDARG00000092910 ENSDARG00000092910 44 1.602 - - - - - 0.808 0.794 - -
22. si:dkey-165i8.5 si:dkey-165i8.5 21 1.581 - - - - - 0.808 0.773 - -
23. si:dkey-7n6.2 ENSDARG00000094602, ENSDARG00000111257 56 1.57 - - - - 0.750 - 0.820 - - si:dkey-7n6.2 [Source:ZFIN;Acc:ZDB-GENE-091204-262]
24. rag1 ENSDARG00000052122 13 1.486 - - 0.712 - - - - - 0.774 recombination activating gene 1 [Source:ZFIN;Acc:ZDB-GENE-990415-234]
25. si:ch211-197n1.2 58 1.476 - - - - - - 0.750 - 0.726 si:ch211-197n1.2, transcript variant X1
26. si:ch211-132g1.6 ENSDARG00000093102 13 1.446 - - - 0.709 - 0.737 - - - si:ch211-132g1.6 [Source:ZFIN;Acc:ZDB-GENE-091204-469]
27. katnal2 ENSDARG00000012275 0 1 - - - - - - - - 1.000 katanin p60 subunit A-like 2 [Source:ZFIN;Acc:ZDB-GENE-051113-156]
28. si:dkey-15h8.13 si:dkey-15h8.13 3 1 - - - - - 1.000 - - -
29. si:dkey-148e22.3 si:dkey-148e22.3 4 1 - - - - - - 1.000 - -
30. ciita ENSDARG00000090851 5 1 - - - - 1.000 - - - - class II, major histocompatibility complex, transactivator [Source:ZFIN;Acc:ZDB-GENE-071116-6]
31. CABZ01041769.3 CABZ01041769.3 5 1 - - - - - 1.000 - - -
32. lratb 3 1 - - - - - - 1.000 - - lecithin retinol acyltransferase b (phosphatidylcholine-retinol O-acyltransferase), transcript variant X2
33. zgc:152938 ENSDARG00000102586 97 1 - - - - - - 1.000 - - zgc:152938 [Source:ZFIN;Acc:ZDB-GENE-061013-458]
34. U1_24 U1_24 0 1 - - - 1.000 - - - - -
35. ifit2 ifit2 11 1 - - - - - 1.000 - - -
36. si:ch211-76l23.4 ENSDARG00000096242 202 1 - - - - - 1.000 - - - si:ch211-76l23.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8310]
37. si:dkey-208k4.10 si:dkey-208k4.10 1 1 - - - - - - - - 1.000
38. CR533575.1 CR533575.1 0 1 - - - - - 1.000 - - -
39. pabpc1l ENSDARG00000002597, ENSDARG00000112364 3 1 - - - 1.000 - - - - - poly(A) binding protein, cytoplasmic 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-5836]
40. tmem86a ENSDARG00000044034 1 1 - - - - - 1.000 - - - transmembrane protein 86A [Source:ZFIN;Acc:ZDB-GENE-050320-81]
41. usp46 ENSDARG00000045343 65 1 - - - - - 1.000 - - - ubiquitin specific peptidase 46 [Source:ZFIN;Acc:ZDB-GENE-070705-213]
42. U1_27 U1_27 0 1 - - - 1.000 - - - - -
43. irx4a ENSDARG00000035648 71 1 - - - - - - 1.000 - - iroquois homeobox 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1825]
44. CR762480.5 CR762480.5 1 1 - - - - - - 1.000 - -
45. BX005442.2 ENSDARG00000111949 0 1 - - - 1.000 - - - - -
46. rpe65c ENSDARG00000054420, ENSDARG00000113640 28 1 - - - - - - - - 1.000 retinal pigment epithelium-specific protein 65c [Source:ZFIN;Acc:ZDB-GENE-081104-505]
47. si:ch1073-181h11.2 ENSDARG00000103883 24 1 - - - - - - 1.000 - - si:ch1073-181h11.2 [Source:ZFIN;Acc:ZDB-GENE-081031-58]
48. si:dkey-150h13.1 si:dkey-150h13.1 1 1 - - - - - - 1.000 - -
49. cnr1 ENSDARG00000009020 33 1 - - - - - 1.000 - - - cannabinoid receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040312-3]
50. CACNA2D1_1 ENSDARG00000073752 2 1 - - - - - 1.000 - - - calcium voltage-gated channel auxiliary subunit alpha2delta 1 [Source:HGNC Symbol;Acc:HGNC:1399]
51. zgc:174704 10 1 - - - - - 1.000 - - - zgc:174704, transcript variant X2
52. chst2b ENSDARG00000058585 33 1 - - - - - 1.000 - - - carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2b [Source:ZFIN;Acc:ZDB-GENE-060720-33]
53. CT583626.2 CT583626.2 53 1 - - - - - 1.000 - - -
54. fbxo32 ENSDARG00000040277 93 1 - - - - - - 1.000 - - F-box protein 32 [Source:ZFIN;Acc:ZDB-GENE-040426-1040]
55. CCL19 CCL19 6 1 - - - - - 1.000 - - -
56. si:dkey-11f14.2 si:dkey-11f14.2 2 1 - - - - - 1.000 - - -
57. grtp1b ENSDARG00000030269 24 1 - - - - - - 1.000 - - growth hormone regulated TBC protein 1b [Source:ZFIN;Acc:ZDB-GENE-050417-346]
58. MYL2 MYL2 7 1 - - - 1.000 - - - - -
59. tcte1 ENSDARG00000077387 2 1 - - - - - - - - 1.000 t-complex-associated-testis-expressed 1 [Source:ZFIN;Acc:ZDB-GENE-120406-12]
60. si:dkey-4e4.1 ENSDARG00000096026, ENSDARG00000109251 48 1 - - - - - 1.000 - - - si:dkey-4e4.1 [Source:ZFIN;Acc:ZDB-GENE-110914-73]
61. rhot1b ENSDARG00000103313, ENSDARG00000109702, ENSDARG00000114871 44 1 - - - - - 1.000 - - - ras homolog family member T1 [Source:ZFIN;Acc:ZDB-GENE-061009-52]
62. cyp2n13 ENSDARG00000042953 10 1 - - - - - - 1.000 - - cytochrome P450, family 2, subfamily N, polypeptide 13 [Source:ZFIN;Acc:ZDB-GENE-041001-158]
63. U1_35 U1_35 1 1 - - - - - - 1.000 - -
64. si:dkey-202i12.5 si:dkey-202i12.5 20 1 - - - - - 1.000 - - -
65. CU181898.1 CU181898.1 0 1 - - - 1.000 - - - - -
66. tlr20al tlr20al 0 1 - - - - - 1.000 - - -
67. fibcd1 ENSDARG00000060393, ENSDARG00000109954 0 1 - - - - - - - - 1.000 fibrinogen C domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-070424-245]
68. si:dkey-122c11.1 ENSDARG00000093747 19 1 - - - - - - 1.000 - - si:dkey-122c11.1 [Source:ZFIN;Acc:ZDB-GENE-060531-74]
69. CENPA 63 1 - - - - - 1.000 - - - histone H3-like centromeric protein A
70. fabp10a ENSDARG00000038439 4 1 - - - - - 1.000 - - - fatty acid binding protein 10a, liver basic [Source:ZFIN;Acc:ZDB-GENE-020318-1]
71. EGFLAM 0 1 - - - - - 1.000 - - - EGF like, fibronectin type III and laminin G domains, transcript variant X2
72. ZBED1 ZBED1 2 1 - - - - - 1.000 - - -
73. si:dkey-163m14.6 5 1 - - - - 1.000 - - - - si:dkey-163m14.6
74. cd44a ENSDARG00000087863 4 1 - - - 1.000 - - - - - CD44 molecule (Indian blood group) a [Source:ZFIN;Acc:ZDB-GENE-110429-1]
75. si:dkey-16p6.1_2 ENSDARG00000088245, ENSDARG00000089179, ENSDARG00000090033, ENSDARG00000090192, ENSDARG00000090734, ENSDARG00000091746, ENSDARG00000098189, ENSDARG00000098515, ENSDARG00000099262, ENSDARG00000100061, ENSDARG00000100164, ENSDARG00000101351, ENSDARG00000101689, ENSDARG00000101828, ENSDARG00000102212, ENSDARG00000104416, ENSDARG00000104897, ENSDARG00000105266, ENSDARG00000111518 1 1 - - - - - - 1.000 - - si:dkey-16p6.1 [Source:ZFIN;Acc:ZDB-GENE-081103-43]
76. si:dkey-78k22.2 si:dkey-78k22.2 2 1 - - - 1.000 - - - - -
77. PSMD2 ENSDARG00000099653 97 1 - - - - - 1.000 - - - proteasome 26S subunit, non-ATPase 2 [Source:HGNC Symbol;Acc:HGNC:9559]
78. dzank1 ENSDARG00000055787, ENSDARG00000111473 26 1 - - - - - 1.000 - - - double zinc ribbon and ankyrin repeat domains 1 [Source:ZFIN;Acc:ZDB-GENE-051113-296]
79. BX927362.1 ENSDARG00000097469 13 1 - - - - 1.000 - - - -
80. ighv14-1 ENSDARG00000096418 17 1 - - - 1.000 - - - - - immunoglobulin heavy variable 14-1 [Source:ZFIN;Acc:ZDB-GENE-040514-42]
81. zp2.5 ENSDARG00000086522 15 1 - - - - - - 1.000 - - zona pellucida glycoprotein 2, tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-090306-1]
82. si:dkey-220o21.2 si:dkey-220o21.2 19 1 - - - - - 1.000 - - -
83. si:ch211-244b2.4 ENSDARG00000045530 32 1 - - - - - 1.000 - - - si:ch211-244b2.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8699]
84. SNORD88 SNORD88 232 1 - - - - - 1.000 - - -
85. CABZ01054391.1 ENSDARG00000103952 2 1 - - - - - 1.000 - - - NACHT, LRR and PYD domains-containing protein 12-like [Source:NCBI gene;Acc:100150280]
86. phf21aa ENSDARG00000006878 31 1 - - - - - - 1.000 - - PHD finger protein 21Aa [Source:ZFIN;Acc:ZDB-GENE-050208-99]
87. Metazoa_SRP_4 Metazoa_SRP_4 0 1 - - - 1.000 - - - - -
88. si:dkey-22i16.9 ENSDARG00000095949 16 1 - - - - - 1.000 - - - si:dkey-22i16.9 [Source:ZFIN;Acc:ZDB-GENE-090313-261]
89. CR626884.3 ENSDARG00000104648 1 1 - - - 1.000 - - - - -
90. si:dkey-286j17.3 si:dkey-286j17.3 8 1 - - - - - - 1.000 - -
91. CR855327.1 CR855327.1 6 1 - - - - - 1.000 - - -
92. or106-10 ENSDARG00000091143, ENSDARG00000111913, ENSDARG00000114806 1 1 - - - - - - 1.000 - - odorant receptor, family G, subfamily 106, member 10 [Source:ZFIN;Acc:ZDB-GENE-070806-62]
93. si:dkey-56i24.1 ENSDARG00000053345, ENSDARG00000078152 11 1 - - - - - - 1.000 - - si:dkey-56i24.1 [Source:ZFIN;Acc:ZDB-GENE-081105-8]
94. XKR8 XKR8 9 1 - - - - - - 1.000 - -
95. dbpa ENSDARG00000063014 107 1 - - - - - - 1.000 - - D site albumin promoter binding protein a [Source:ZFIN;Acc:ZDB-GENE-060503-802]
96. BX511021.2 ENSDARG00000097646 5 1 - - - - - - 1.000 - -
97. EFEMP1_1 EFEMP1_1 8 1 - - - - - 1.000 - - -
98. zgc:158654 19 1 - - - 1.000 - - - - - zgc:158654, transcript variant X1
99. pigr ENSDARG00000101890 10 1 - - - - - - 1.000 - - polymeric immunoglobulin receptor [Source:ZFIN;Acc:ZDB-GENE-060503-327]
100. CU468142.1 CU468142.1 6 1 - - - 1.000 - - - - -

There are 825 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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