Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch1073-525h16.1

Gene Name Gene ID Reads Annotation
si:ch1073-525h16.1 si:ch1073-525h16.1 1










Genes with expression patterns similar to si:ch1073-525h16.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch1073-525h16.1 si:ch1073-525h16.1 1 2 1.000 - - - - - 1.000 - -
2. slitrk2 ENSDARG00000006636 40 1.848 0.919 - - - - - 0.929 - - SLIT and NTRK-like family, member 2 [Source:ZFIN;Acc:ZDB-GENE-080327-7]
3. znhit3 ENSDARG00000023950 61 1.798 1.000 - - - - - 0.798 - - zinc finger, HIT-type containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1114]
4. zgc:174224 ENSDARG00000093875 4 1.751 0.751 - - - - - 1.000 - - zgc:174224 [Source:ZFIN;Acc:ZDB-GENE-071004-118]
5. cnrip1b ENSDARG00000037337 39 1.732 0.732 - - - - - 1.000 - - cannabinoid receptor interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-080722-33]
6. LRFN4 LRFN4 59 1.718 1.000 - - - - - 0.718 - -
7. CDH12 CDH12 44 1.573 0.732 - - - - - 0.841 - -
8. fhl1a ENSDARG00000071498, ENSDARG00000115132 164 1 - - - - - - 1.000 - - four and a half LIM domains 1a [Source:ZFIN;Acc:ZDB-GENE-040206-1]
9. si:dkey-222f8.6 si:dkey-222f8.6 7 1 - - - - - - 1.000 - -
10. FNDC7_1 FNDC7_1 3 1 - - - - - - 1.000 - -
11. agrn_1 ENSDARG00000079388, ENSDARG00000110127 47 1 - - - - - - 1.000 - - agrin [Source:ZFIN;Acc:ZDB-GENE-030131-1033]
12. si:ch211-142k18.1 1 1 1.000 - - - - - - - - si:ch211-142k18.1
13. BX005421.3 ENSDARG00000114309 7 1 - - - - - - 1.000 - -
14. BX511182.1 BX511182.1 8 1 1.000 - - - - - - - -
15. Metazoa_SRP_29 Metazoa_SRP_29 1 1 1.000 - - - - - - - -
16. ciz1a ENSDARG00000089781 20 1 - - - - - - 1.000 - - cdkn1a interacting zinc finger protein 1a [Source:ZFIN;Acc:ZDB-GENE-100922-222]
17. C6H22orf23 C6H22orf23 15 1 - - - - - - 1.000 - -
18. gria1b ENSDARG00000032714, ENSDARG00000111658 12 1 1.000 - - - - - - - - glutamate receptor, ionotropic, AMPA 1b [Source:ZFIN;Acc:ZDB-GENE-020125-2]
19. ccdc129 37 1 1.000 - - - - - - - - coiled-coil domain containing 129, transcript variant X2
20. si:dkey-239j18.3 ENSDARG00000089806 12918 1 - - - - - - 1.000 - - si:dkey-239j18.3 [Source:ZFIN;Acc:ZDB-GENE-121214-39]
21. BX004994.2 BX004994.2 17 1 1.000 - - - - - - - -
22. scn4aa ENSDARG00000098738, ENSDARG00000113568 5 1 - - - - - - 1.000 - - sodium channel, voltage-gated, type IV, alpha, a [Source:ZFIN;Acc:ZDB-GENE-051201-2]
23. dnm2a ENSDARG00000069937 32 1 1.000 - - - - - - - - dynamin 2a [Source:ZFIN;Acc:ZDB-GENE-050913-84]
24. snx21 ENSDARG00000062770, ENSDARG00000111065 9 1 1.000 - - - - - - - - sorting nexin family member 21 [Source:ZFIN;Acc:ZDB-GENE-061013-557]
25. CR391967.1 CR391967.1 135 1 - - - - - - 1.000 - -
26. BPIFC BPIFC 11 1 - - - - - - 1.000 - -
27. pcyox1 ENSDARG00000103052 20 1 - - - - - - 1.000 - - prenylcysteine oxidase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-98]
28. KRT18_1 KRT18_1 17 1 1.000 - - - - - - - -
29. CMKLR1_1 CMKLR1_1 2 1 - - - - - - 1.000 - -
30. zdhhc2 ENSDARG00000034757, ENSDARG00000110118 28 1 1.000 - - - - - - - - zinc finger, DHHC-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-050320-58]
31. itga6l ENSDARG00000056018 1 1 - - - - - - 1.000 - - integrin, alpha 6, like [Source:ZFIN;Acc:ZDB-GENE-040914-57]
32. BX323876.2 ENSDARG00000104577 62 1 - - - - - - 1.000 - -
33. edar ENSDARG00000099088 1 1 - - - - - - 1.000 - - ectodysplasin A receptor [Source:ZFIN;Acc:ZDB-GENE-070117-2062]
34. si:dkey-258f14.3 ENSDARG00000075974 9 1 - - - - - - 1.000 - - si:dkey-258f14.3 [Source:ZFIN;Acc:ZDB-GENE-050809-43]
35. sp5l ENSDARG00000115868 361 1 - - - - - - 1.000 - - Sp5 transcription factor-like [Source:ZFIN;Acc:ZDB-GENE-030131-2981]
36. kif3cb ENSDARG00000079500 935 1 - - - - - - 1.000 - - kinesin family member 3Cb [Source:ZFIN;Acc:ZDB-GENE-080709-4]
37. tbkbp1 ENSDARG00000061473 24 1 - - - - - - 1.000 - - TBK1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-100203-1]
38. SLC35A3_1 SLC35A3_1 35 1 1.000 - - - - - - - -
39. BX004873.3 BX004873.3 59 1 - - - - - - 1.000 - -
40. CABZ01090975.1 CABZ01090975.1 9 1 1.000 - - - - - - - -
41. CCDC37 CCDC37 10 1 1.000 - - - - - - - -
42. rsad1 ENSDARG00000077698, ENSDARG00000112179 93 1 1.000 - - - - - - - - radical S-adenosyl methionine domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2508]
43. SYTL2 SYTL2 139 1 1.000 - - - - - - - -
44. rcv1 rcv1 77 1 - - - - - - 1.000 - -
45. si:ch73-127m5.3 si:ch73-127m5.3 1 1 1.000 - - - - - - - -
46. ccdc170 ENSDARG00000016161 18 1 - - - - - - 1.000 - - coiled-coil domain containing 170 [Source:ZFIN;Acc:ZDB-GENE-070112-162]
47. ccdc24 ENSDARG00000038793 7 1 - - - - - - 1.000 - - coiled-coil domain containing 24 [Source:ZFIN;Acc:ZDB-GENE-050327-18]
48. hapln4 ENSDARG00000018542 10 1 - - - - - - 1.000 - - hyaluronan and proteoglycan link protein 4 [Source:ZFIN;Acc:ZDB-GENE-060503-243]
49. si:ch211-113a14.19_4 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 18 1 - - - - - - 1.000 - - si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
50. cx28.8 ENSDARG00000071042 62 1 1.000 - - - - - - - - connexin 28.8 [Source:ZFIN;Acc:ZDB-GENE-050616-1]
51. gpr19 ENSDARG00000102226 17 1 - - - - - - 1.000 - - G protein-coupled receptor 19 [Source:ZFIN;Acc:ZDB-GENE-040426-1295]
52. RNF214_1 RNF214_1 5 1 1.000 - - - - - - - -
53. nfatc1 ENSDARG00000036168 16 1 - - - - - - 1.000 - - nuclear factor of activated T cells 1 [Source:ZFIN;Acc:ZDB-GENE-060503-677]
54. si:dkey-54f18.2 si:dkey-54f18.2 27 1 1.000 - - - - - - - -
55. matn3a ENSDARG00000069245 2410 1 1.000 - - - - - - - - matrilin 3a [Source:ZFIN;Acc:ZDB-GENE-040822-21]
56. CIT_1 CIT_1 6 1 - - - - - - 1.000 - -
57. oxtrl ENSDARG00000044175 10 1 1.000 - - - - - - - - oxytocin receptor like [Source:ZFIN;Acc:ZDB-GENE-110805-1]
58. arhgap15 ENSDARG00000062349 28 1 1.000 - - - - - - - - Rho GTPase activating protein 15 [Source:ZFIN;Acc:ZDB-GENE-070912-314]
59. ctrl ENSDARG00000068680 18 1 1.000 - - - - - - - - chymotrypsin-like [Source:ZFIN;Acc:ZDB-GENE-040912-147]
60. ptf1a ENSDARG00000014479 349 1 - - - - - - 1.000 - - pancreas associated transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-579]
61. si:dkey-61p9.11 ENSDARG00000096762, ENSDARG00000110448 2 1 1.000 - - - - - - - - si:dkey-61p9.11 [Source:ZFIN;Acc:ZDB-GENE-041210-242]
62. PLCXD1_2 PLCXD1_2 9 1 - - - - - - 1.000 - -
63. si:ch211-168h21.3 10 1 1.000 - - - - - - - - si:ch211-168h21.3
64. TRPC4_1 TRPC4_1 212 1 - - - - - - 1.000 - -
65. si:dkey-189j19.1 si:dkey-189j19.1 0 1 - - - - - - 1.000 - -
66. gaa ENSDARG00000090714 19 1 - - - - - - 1.000 - - glucosidase, alpha; acid (Pompe disease, glycogen storage disease type II) [Source:ZFIN;Acc:ZDB-GENE-070212-2]
67. htr6 ENSDARG00000016095 9 1 1.000 - - - - - - - - 5-hydroxytryptamine (serotonin) receptor 6 [Source:ZFIN;Acc:ZDB-GENE-030131-7839]
68. MYO9B ENSDARG00000078313 97 1 - - - - - - 1.000 - - myosin IXB [Source:HGNC Symbol;Acc:HGNC:7609]
69. CU468142.1 CU468142.1 6 1 - - - - - - 1.000 - -
70. cep68 ENSDARG00000039411 30 1 1.000 - - - - - - - - centrosomal protein 68 [Source:ZFIN;Acc:ZDB-GENE-030616-565]
71. b3gntl1 ENSDARG00000043431 50 1 1.000 - - - - - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 [Source:ZFIN;Acc:ZDB-GENE-050913-133]
72. kif20a ENSDARG00000044491 12 1 - - - - - - 1.000 - - kinesin family member 20A [Source:ZFIN;Acc:ZDB-GENE-050522-252]
73. tbc1d22b ENSDARG00000026988 18 1 - - - - - - 1.000 - - TBC1 domain family, member 22B [Source:ZFIN;Acc:ZDB-GENE-091118-28]
74. si:ch211-150j10.4 ENSDARG00000079336 23 1 1.000 - - - - - - - - si:ch211-150j10.4 [Source:ZFIN;Acc:ZDB-GENE-110411-215]
75. scg5_1 ENSDARG00000032126, ENSDARG00000077045 6 1 - - - - - - 1.000 - - secretogranin V [Source:ZFIN;Acc:ZDB-GENE-040426-1687]
76. MAP3K2 ENSDARG00000062884 34 1 - - - - - - 1.000 - - mitogen-activated protein kinase kinase kinase 2 [Source:ZFIN;Acc:ZDB-GENE-120215-96]
77. CU633740.1 CU633740.1 8 1 - - - - - - 1.000 - -
78. mab21l3 ENSDARG00000076013, ENSDARG00000112160 35 1 1.000 - - - - - - - - mab-21-like 3 [Source:ZFIN;Acc:ZDB-GENE-070912-242]
79. CU183952.1 CU183952.1 32 1 1.000 - - - - - - - -
80. npas4a ENSDARG00000055752 5 1 - - - - - - 1.000 - - neuronal PAS domain protein 4a [Source:ZFIN;Acc:ZDB-GENE-060616-396]
81. abcg1 ENSDARG00000063475 97 1 1.000 - - - - - - - - ATP-binding cassette, sub-family G (WHITE), member 1 [Source:ZFIN;Acc:ZDB-GENE-070424-84]
82. si:dkey-271j15.3 ENSDARG00000091627 88 1 - - - - - - 1.000 - - si:dkey-271j15.3 [Source:ZFIN;Acc:ZDB-GENE-100921-27]
83. ZNF512B ENSDARG00000071055 7 1 - - - - - - 1.000 - - zinc finger protein 512B [Source:HGNC Symbol;Acc:HGNC:29212]
84. si:dkey-20j10.2 si:dkey-20j10.2 8 1 - - - - - - 1.000 - -
85. wu:fd60c08 wu:fd60c08 35 1 - - - - - - 1.000 - -
86. si:dkey-167k11.1 si:dkey-167k11.1 14 1 - - - - - - 1.000 - -
87. slc25a3a ENSDARG00000027424 11 1 - - - - - - 1.000 - - solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3a [Source:ZFIN;Acc:ZDB-GENE-040426-1673]
88. si:dkeyp-46h3.8 ENSDARG00000093704 9 1 1.000 - - - - - - - - si:dkeyp-46h3.8 [Source:ZFIN;Acc:ZDB-GENE-060503-183]
89. CABZ01015475.1 ENSDARG00000104841 6 1 - - - - - - 1.000 - - jumonji domain containing 8 [Source:NCBI gene;Acc:100330060]
90. DUSP13_1 DUSP13_1 425 1 1.000 - - - - - - - -
91. TBC1D10C ENSDARG00000037408 18 1 - - - - - - 1.000 - - TBC1 domain family, member 10C [Source:ZFIN;Acc:ZDB-GENE-130125-1]
92. fabp10a ENSDARG00000038439 4 1 1.000 - - - - - - - - fatty acid binding protein 10a, liver basic [Source:ZFIN;Acc:ZDB-GENE-020318-1]
93. ZNF70 ZNF70 2 1 - - - - - - 1.000 - -
94. tecta ENSDARG00000059558 15 1 1.000 - - - - - - - - tectorin alpha [Source:ZFIN;Acc:ZDB-GENE-110411-120]
95. xrra1 ENSDARG00000089578 18 1 - - - - - - 1.000 - - X-ray radiation resistance associated 1 [Source:ZFIN;Acc:ZDB-GENE-101216-2]
96. zgc:195633_1 142 1 - - - - - - 1.000 - - zgc:195633
97. ptpn20 ENSDARG00000075459 1 1 1.000 - - - - - - - - protein tyrosine phosphatase, non-receptor type 20 [Source:ZFIN;Acc:ZDB-GENE-090313-90]
98. CNTNAP3 ENSDARG00000067824 25 1 - - - - - - 1.000 - - contactin associated protein like 3 [Source:ZFIN;Acc:ZDB-GENE-091113-51]
99. si:ch211-260b17.6 32 1 1.000 - - - - - - - - si:ch211-260b17.6
100. si:dkey-163m14.5 si:dkey-163m14.5 1 1 1.000 - - - - - - - -

There are 527 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA