Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for npas4a

Gene Name Gene ID Reads Annotation
npas4a ENSDARG00000055752 5 neuronal PAS domain protein 4a [Source:ZFIN;Acc:ZDB-GENE-060616-396]










Genes with expression patterns similar to npas4a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. npas4a ENSDARG00000055752 5 6 - - 1.000 - 1.000 1.000 1.000 1.000 1.000 neuronal PAS domain protein 4a [Source:ZFIN;Acc:ZDB-GENE-060616-396]
2. CABZ01015475.1 ENSDARG00000104841 6 2 - - - - 1.000 - 1.000 - - jumonji domain containing 8 [Source:NCBI gene;Acc:100330060]
3. cart4 ENSDARG00000070142 55 1.937 - - - - - - 1.000 - 0.937 cocaine- and amphetamine-regulated transcript 4 [Source:ZFIN;Acc:ZDB-GENE-060503-863]
4. cabp5b ENSDARG00000028485, ENSDARG00000110087 1 1.915 - - 1.000 - - - - - 0.915 calcium binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-050522-146]
5. si:ch211-113a14.14_3 si:ch211-113a14.14_3 21 1.915 - - - - - - 1.000 - 0.915
6. zgc:174224 ENSDARG00000093875 4 1.915 - - - - - - 1.000 - 0.915 zgc:174224 [Source:ZFIN;Acc:ZDB-GENE-071004-118]
7. CACNA2D1_1 ENSDARG00000073752 2 1.915 - - - - 1.000 - - - 0.915 calcium voltage-gated channel auxiliary subunit alpha2delta 1 [Source:HGNC Symbol;Acc:HGNC:1399]
8. SNORA30 SNORA30 1 1.915 - - - - 1.000 - - - 0.915
9. si:ch211-223a21.3 ENSDARG00000104737 28 1.891 - - - - - - 1.000 0.891 - si:ch211-223a21.3 [Source:ZFIN;Acc:ZDB-GENE-110913-50]
10. itga6l ENSDARG00000056018 1 1.891 - - - - - - 1.000 0.891 - integrin, alpha 6, like [Source:ZFIN;Acc:ZDB-GENE-040914-57]
11. si:ch211-229l10.10 si:ch211-229l10.10 8 1.806 - - - - - - - 0.891 0.915
12. FMNL1 FMNL1 7 1.806 - - - - 1.000 - - 0.806 -
13. rrnad1_1 ENSDARG00000089033 43 1.764 - - 1.000 - - - 0.764 - - ribosomal RNA adenine dimethylase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050522-515]
14. ZNF512B ENSDARG00000071055 7 1.759 - - - - - 0.759 1.000 - - zinc finger protein 512B [Source:HGNC Symbol;Acc:HGNC:29212]
15. xrra1 ENSDARG00000089578 18 1.759 - - - - - 0.759 1.000 - - X-ray radiation resistance associated 1 [Source:ZFIN;Acc:ZDB-GENE-101216-2]
16. si:dkey-200c24.1 si:dkey-200c24.1 7 1.741 - - - - 1.000 - - 0.741 -
17. ZP2_1 ZP2_1 7 1.741 - - - - 0.741 - 1.000 - -
18. si:ch211-255g12.5 si:ch211-255g12.5 7 1.727 - - 0.727 - - - 1.000 - -
19. si:dkey-239j18.3 ENSDARG00000089806 12918 1.722 - - - - - - 1.000 0.722 - si:dkey-239j18.3 [Source:ZFIN;Acc:ZDB-GENE-121214-39]
20. CAPG CAPG 17 1.711 - - - - 0.711 - 1.000 - -
21. cdhr1a ENSDARG00000004643 7 1.708 - - - - 0.817 - - 0.891 - cadherin-related family member 1a [Source:ZFIN;Acc:ZDB-GENE-040924-4]
22. TRIM46 TRIM46 73 1.708 - - - - 0.872 - 0.836 - -
23. fzd8b ENSDARG00000038569, ENSDARG00000110687 52 1.705 - - - - 0.705 - 1.000 - - frizzled class receptor 8b [Source:ZFIN;Acc:ZDB-GENE-000328-4]
24. isl1l ENSDARG00000021055, ENSDARG00000110204 4 1.674 - - - - - 0.759 - - 0.915 islet1, like [Source:ZFIN;Acc:ZDB-GENE-040624-1]
25. CT027762.3 CT027762.3 17 1.667 - - - - 0.912 - 0.755 - -
26. si:dkeyp-87a6.2 ENSDARG00000093322 18 1.666 - - - - 0.907 0.759 - - - si:dkeyp-87a6.2 [Source:ZFIN;Acc:ZDB-GENE-091118-57]
27. crfb2 ENSDARG00000040332, ENSDARG00000109306, ENSDARG00000116866 21 1.657 - - - - 0.878 - 0.779 - - cytokine receptor family member b2 [Source:ZFIN;Acc:ZDB-GENE-070905-2]
28. ankdd1a ENSDARG00000098647 8 1.609 - - - - - - - 0.891 0.718 ankyrin repeat and death domain containing 1A [Source:ZFIN;Acc:ZDB-GENE-070615-8]
29. si:dkeyp-35e5.1 si:dkeyp-35e5.1 12 1.595 - - - - - 0.759 0.836 - -
30. si:ch211-229d2.5 ENSDARG00000079119 95 1.577 - - 0.866 - - 0.711 - - - si:ch211-229d2.5 [Source:ZFIN;Acc:ZDB-GENE-121214-200]
31. si:dkey-29j8.5 si:dkey-29j8.5 9 1.567 - - - - 0.788 - 0.779 - -
32. si:dkey-183p4.10 ENSDARG00000077907 5 1.546 - - 0.820 - - - - 0.726 - si:dkey-183p4.10 [Source:ZFIN;Acc:ZDB-GENE-081104-337]
33. STK31 ENSDARG00000056339 37 1.534 - - - - - 0.759 - 0.775 - serine/threonine kinase 31 [Source:ZFIN;Acc:ZDB-GENE-140106-59]
34. fndc7 fndc7 3 1.526 - - 0.767 - - 0.759 - - -
35. MAP4K2 ENSDARG00000001234 39 1.463 - - - - - 0.759 0.704 - - mitogen-activated protein kinase kinase kinase kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030616-163]
36. CU570981.1 CU570981.1 9 1 - - 1.000 - - - - - -
37. CMA1_4 CMA1_4 23 1 - - - - - - 1.000 - -
38. GABRA2_1 ENSDARG00000113737 5 1 - - - - 1.000 - - - - gamma-aminobutyric acid type A receptor alpha2 subunit [Source:HGNC Symbol;Acc:HGNC:4076]
39. si:ch211-57m13.9 ENSDARG00000095884 10 1 - - - - - - 1.000 - - si:ch211-57m13.9 [Source:ZFIN;Acc:ZDB-GENE-110411-61]
40. MEX3D MEX3D 293 1 - - - - - - 1.000 - -
41. si:dkeyp-104f11.5 si:dkeyp-104f11.5 30 1 - - - - - - 1.000 - -
42. eomesa ENSDARG00000006640 257 1 - - - - - - 1.000 - - eomesodermin homolog a [Source:ZFIN;Acc:ZDB-GENE-001228-1]
43. si:ch211-113a14.26_2 0 1 - - - - - - 1.000 - - si:ch211-113a14.26
44. drd2a ENSDARG00000056926 40 1 - - - - - - 1.000 - - dopamine receptor D2a [Source:ZFIN;Acc:ZDB-GENE-021119-2]
45. sez6l ENSDARG00000100594 35 1 - - - - - - 1.000 - - seizure related 6 homolog (mouse)-like [Source:ZFIN;Acc:ZDB-GENE-091204-162]
46. zfp64 ENSDARG00000061147 44 1 - - - - - - 1.000 - - zinc finger protein 64 homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-031118-80]
47. BX005410.2 BX005410.2 44 1 - - - - 1.000 - - - -
48. si:dkey-40j3.3 ENSDARG00000103597 5 1 - - - - 1.000 - - - - si:dkey-40j3.3 [Source:ZFIN;Acc:ZDB-GENE-110913-109]
49. si:dkey-92c21.3 si:dkey-92c21.3 2 1 - - 1.000 - - - - - -
50. si:ch211-57m13.8 ENSDARG00000078271 1 1 - - - - 1.000 - - - - si:ch211-57m13.8 [Source:ZFIN;Acc:ZDB-GENE-110411-238]
51. morc3b ENSDARG00000043271 8 1 - - 1.000 - - - - - - MORC family CW-type zinc finger 3b [Source:ZFIN;Acc:ZDB-GENE-040801-98]
52. pm20d1.1 ENSDARG00000037551 11 1 - - - - - - 1.000 - - peptidase M20 domain containing 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-051120-102]
53. si:dkey-93m18.5 si:dkey-93m18.5 2 1 - - 1.000 - - - - - -
54. si:dkey-228d14.8 si:dkey-228d14.8 3 1 - - 1.000 - - - - - -
55. cyp2aa12 ENSDARG00000102805 3 1 - - - - - 1.000 - - - cytochrome P450, family 2, subfamily AA, polypeptide 12 [Source:ZFIN;Acc:ZDB-GENE-071004-47]
56. hs3st4 ENSDARG00000052648 6 1 - - - - 1.000 - - - - heparan sulfate (glucosamine) 3-O-sulfotransferase 4 [Source:ZFIN;Acc:ZDB-GENE-070202-8]
57. si:ch211-66k16.24 si:ch211-66k16.24 1 1 - - - - 1.000 - - - -
58. CABZ01089980.1 ENSDARG00000117446 16 1 - - - - - - 1.000 - -
59. fabp7b ENSDARG00000034650 397 1 - - - - - - 1.000 - - fatty acid binding protein 7, brain, b [Source:ZFIN;Acc:ZDB-GENE-040614-4]
60. si:ch211-281p14.2 22 1 - - - - - - 1.000 - - si:ch211-281p14.2, transcript variant X2
61. prl ENSDARG00000037946 80 1 - - - - - - 1.000 - - prolactin [Source:ZFIN;Acc:ZDB-GENE-030513-1]
62. si:dkey-235h8.1 si:dkey-235h8.1 2457 1 - - - - - - 1.000 - -
63. si:dkey-30g5.2 si:dkey-30g5.2 1 1 - - - - 1.000 - - - -
64. CABZ01036418.1 CABZ01036418.1 0 1 - - - - - - 1.000 - -
65. clock clock 32 1 - - - - - - 1.000 - -
66. zdhhc18a ENSDARG00000069807 8 1 - - - - - - 1.000 - - zinc finger, DHHC-type containing 18a [Source:ZFIN;Acc:ZDB-GENE-060929-424]
67. si:ch211-198c19.3 ENSDARG00000095533 5 1 - - - - - - 1.000 - - si:ch211-198c19.3 [Source:ZFIN;Acc:ZDB-GENE-100922-226]
68. ubxn1 ENSDARG00000090309 17 1 - - - - - 1.000 - - - UBX domain protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-792]
69. CU459012.3 ENSDARG00000109688 1 1 - - - - 1.000 - - - -
70. twsg1b 7 1 - - 1.000 - - - - - - twisted gastrulation BMP signaling modulator 1b
71. hmgcra ENSDARG00000052734, ENSDARG00000109336 45 1 - - - - - - 1.000 - - 3-hydroxy-3-methylglutaryl-CoA reductase a [Source:ZFIN;Acc:ZDB-GENE-040401-2]
72. CT573253.1 CT573253.1 4 1 - - - - 1.000 - - - -
73. cyp3c4 ENSDARG00000070021 95 1 - - - - - - 1.000 - - cytochrome P450, family 3, subfamily C, polypeptide 4 [Source:ZFIN;Acc:ZDB-GENE-060929-96]
74. si:ch211-160j14.4 si:ch211-160j14.4 0 1 - - 1.000 - - - - - -
75. si:ch211-93g21.3 si:ch211-93g21.3 1 1 - - - - 1.000 - - - -
76. si:ch211-71k14.1 ENSDARG00000087061 48 1 - - - - - - 1.000 - - si:ch211-71k14.1 [Source:ZFIN;Acc:ZDB-GENE-110411-283]
77. BX936443.2 BX936443.2 28 1 - - - - - - 1.000 - -
78. wu:fe38f03 wu:fe38f03 22 1 - - - - - - 1.000 - -
79. fam154b fam154b 2 1 - - 1.000 - - - - - -
80. PRPF6 ENSDARG00000091367 48 1 - - - - - - 1.000 - - PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-2575]
81. si:dkey-258p11.1 si:dkey-258p11.1 48 1 - - - - - - 1.000 - -
82. si:ch211-244h4.2 si:ch211-244h4.2 1 1 - - - - 1.000 - - - -
83. zgc:56231 ENSDARG00000010332 0 1 - - - - - - 1.000 - - zgc:56231 [Source:ZFIN;Acc:ZDB-GENE-040426-1914]
84. tbr1a ENSDARG00000076259 341 1 - - - - - - 1.000 - - T-box, brain, 1a [Source:ZFIN;Acc:ZDB-GENE-060810-93]
85. cnrip1b ENSDARG00000037337 39 1 - - - - - - 1.000 - - cannabinoid receptor interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-080722-33]
86. BEGAIN BEGAIN 39 1 - - - - - - 1.000 - -
87. si:ch73-343l4.6 ENSDARG00000025547, ENSDARG00000095127 1 1 - - - - 1.000 - - - - si:ch73-343l4.6 [Source:ZFIN;Acc:ZDB-GENE-090313-158]
88. si:dkey-222p3.1 ENSDARG00000071103, ENSDARG00000109854 16 1 - - - - - - 1.000 - - si:dkey-222p3.1 [Source:ZFIN;Acc:ZDB-GENE-050208-374]
89. NOTCH2NL NOTCH2NL 5 1 - - - - - - 1.000 - -
90. si:ch211-113a14.18 ENSDARG00000051735 1253 1 - - - - - - 1.000 - - si:ch211-113a14.18 [Source:ZFIN;Acc:ZDB-GENE-121214-116]
91. BX323089.1 BX323089.1 0 1 - - - - - - 1.000 - -
92. SNORD14 SNORD14 31 1 - - - - - - 1.000 - -
93. opn4a ENSDARG00000022098, ENSDARG00000110010 3 1 - - 1.000 - - - - - - opsin 4a (melanopsin) [Source:ZFIN;Acc:ZDB-GENE-070111-2]
94. zbtb38 ENSDARG00000100607 17 1 - - - - - - 1.000 - - zinc finger and BTB domain containing 38 [Source:ZFIN;Acc:ZDB-GENE-091204-308]
95. SLC4A8 ENSDARG00000015531 16 1 - - 1.000 - - - - - - solute carrier family 4, sodium bicarbonate cotransporter, member 8 [Source:ZFIN;Acc:ZDB-GENE-131119-88]
96. si:ch211-277p15.1 2 1 - - - - - - 1.000 - - si:ch211-277p15.1, transcript variant X5
97. rnasekb ENSDARG00000104458 13 1 - - - - - - 1.000 - - ribonuclease, RNase K b [Source:ZFIN;Acc:ZDB-GENE-060825-160]
98. ANGEL1 ENSDARG00000077567 38 1 - - - - - - 1.000 - - angel homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-111020-12]
99. si:dkey-85k7.12 ENSDARG00000078731 3 1 - - - - 1.000 - - - - si:dkey-85k7.12 [Source:ZFIN;Acc:ZDB-GENE-130530-855]
100. si:dkey-61f9.2 2 1 - - - - 1.000 - - - - si:dkey-61f9.2

There are 925 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA