Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch1073-47b13.2

Gene Name Gene ID Reads Annotation
si:ch1073-47b13.2 si:ch1073-47b13.2 3










Genes with expression patterns similar to si:ch1073-47b13.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch1073-47b13.2 si:ch1073-47b13.2 3 4 1.000 - - 1.000 - - - 1.000 1.000
2. si:dkey-14o6.7 si:dkey-14o6.7 9 1.854 0.854 - - 1.000 - - - - -
3. PLEKHS1_1 PLEKHS1_1 23 1.733 1.000 - - - - - - 0.733 -
4. dock11 ENSDARG00000062485 17 1.714 1.000 - - 0.714 - - - - - dedicator of cytokinesis 11 [Source:ZFIN;Acc:ZDB-GENE-060503-196]
5. pacrg ENSDARG00000087556 25 1.607 0.901 - - - - - - - 0.706 PARK2 co-regulated [Source:ZFIN;Acc:ZDB-GENE-041114-100]
6. CR854948.2 CR854948.2 4 1 1.000 - - - - - - - -
7. zgc:173714 ENSDARG00000103495 0 1 - - - - - - - 1.000 - zgc:173714 [Source:ZFIN;Acc:ZDB-GENE-071004-90]
8. si:dkeyp-104b3.18 ENSDARG00000101129 1 1 1.000 - - - - - - - - si:dkeyp-104b3.18 [Source:ZFIN;Acc:ZDB-GENE-070912-624]
9. SNORA68 SNORA68 1 1 - - - 1.000 - - - - -
10. CABZ01001466.1 CABZ01001466.1 1 1 - - - 1.000 - - - - -
11. si:dkey-199m13.3 si:dkey-199m13.3 2 1 - - - - - - - 1.000 -
12. si:dkey-37m8.8 si:dkey-37m8.8 1 1 - - - 1.000 - - - - -
13. trpm2 ENSDARG00000095696, ENSDARG00000101641 1 1 - - - 1.000 - - - - - transient receptor potential cation channel, subfamily M, member 2 [Source:ZFIN;Acc:ZDB-GENE-061214-4]
14. pdcd2 ENSDARG00000007892 223 1 1.000 - - - - - - - - programmed cell death 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1236]
15. mir22a-1 mir22a-1 192 1 1.000 - - - - - - - -
16. pdha1b ENSDARG00000010555, ENSDARG00000114832 4 1 1.000 - - - - - - - - pyruvate dehydrogenase E1 alpha 1 subunit b [Source:ZFIN;Acc:ZDB-GENE-040718-96]
17. CD200_1 CD200_1 1 1 1.000 - - - - - - - -
18. BX248128.5 BX248128.5 0 1 - - - - - - - 1.000 -
19. zgc:112437 ENSDARG00000009215 50 1 1.000 - - - - - - - - zgc:112437 [Source:ZFIN;Acc:ZDB-GENE-050417-293]
20. BX005082.1 ENSDARG00000098558 2 1 - - - 1.000 - - - - -
21. phc3 ENSDARG00000074604 2 1 - - - 1.000 - - - - - polyhomeotic homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070912-369]
22. si:dkey-222o15.5 si:dkey-222o15.5 27 1 - - - 1.000 - - - - -
23. im:7151068 im:7151068 2 1 - - - 1.000 - - - - -
24. mea1 ENSDARG00000039820 589 1 1.000 - - - - - - - - male-enhanced antigen 1 [Source:ZFIN;Acc:ZDB-GENE-070424-117]
25. ZNF70_1 ZNF70_1 3 1 - - - - - - - 1.000 -
26. CR392354.1 CR392354.1 20 1 1.000 - - - - - - - -
27. si:dkey-217f16.1 ENSDARG00000089602 17 1 1.000 - - - - - - - - si:dkey-217f16.1 [Source:ZFIN;Acc:ZDB-GENE-091116-95]
28. KCNB1 ENSDARG00000060095, ENSDARG00000112775 5 1 - - - 1.000 - - - - - potassium voltage-gated channel, Shab-related subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-090831-3]
29. si:dkey-185p13.1 ENSDARG00000095837 12 1 - - - 1.000 - - - - - si:dkey-185p13.1 [Source:ZFIN;Acc:ZDB-GENE-110411-125]
30. itga6l ENSDARG00000056018 1 1 - - - - - - - 1.000 - integrin, alpha 6, like [Source:ZFIN;Acc:ZDB-GENE-040914-57]
31. wisp3 ENSDARG00000071048 15 1 - - - - - - - 1.000 - WNT1 inducible signaling pathway protein 3 [Source:ZFIN;Acc:ZDB-GENE-041001-86]
32. BX511066.4 BX511066.4 6 1 - - - 1.000 - - - - -
33. rpap3 ENSDARG00000087962 22 1 - - - 1.000 - - - - - RNA polymerase II associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-928]
34. si:ch211-229l10.10 si:ch211-229l10.10 8 1 - - - - - - - 1.000 -
35. tmem184b tmem184b 2 1 1.000 - - - - - - - -
36. dnaaf3 ENSDARG00000092662 20 1 - - - 1.000 - - - - - dynein, axonemal, assembly factor 3 [Source:ZFIN;Acc:ZDB-GENE-091204-296]
37. antxr2a ENSDARG00000104118, ENSDARG00000111517 12 1 - - - 1.000 - - - - - ANTXR cell adhesion molecule 2a [Source:ZFIN;Acc:ZDB-GENE-060526-14]
38. olig1 ENSDARG00000040948 1 1 - - - 1.000 - - - - - oligodendrocyte transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050107-2]
39. SNORD35_2 SNORD35_2 5 1 - - - 1.000 - - - - -
40. irak3 ENSDARG00000053131 16 1 1.000 - - - - - - - - interleukin-1 receptor-associated kinase 3 [Source:ZFIN;Acc:ZDB-GENE-060503-710]
41. si:ch73-103l1.2 ENSDARG00000096505 17 1 - - - - - - - 1.000 - si:ch73-103l1.2 [Source:ZFIN;Acc:ZDB-GENE-121214-226]
42. VWDE_1 VWDE_1 2 1 1.000 - - - - - - - -
43. CABZ01002339.1 CABZ01002339.1 0 1 - - - 1.000 - - - - -
44. gdf7 ENSDARG00000042784 36 1 1.000 - - - - - - - - growth differentiation factor 7 [Source:ZFIN;Acc:ZDB-GENE-990714-1]
45. si:ch211-215m21.11 si:ch211-215m21.11 2 1 - - - 1.000 - - - - -
46. kiss1 ENSDARG00000075829 4 1 - - - 1.000 - - - - - KiSS-1 metastasis suppressor [Source:ZFIN;Acc:ZDB-GENE-080128-1]
47. dctn1b ENSDARG00000056753 6 1 1.000 - - - - - - - - dynactin 1b [Source:ZFIN;Acc:ZDB-GENE-050419-28]
48. si:ch211-105d18.8 si:ch211-105d18.8 38 1 - - - 1.000 - - - - -
49. SYNGAP1_1 SYNGAP1_1 66 1 1.000 - - - - - - - -
50. PDE4A ENSDARG00000032344 1 1 - - - 1.000 - - - - - phosphodiesterase 4A, cAMP-specific [Source:ZFIN;Acc:ZDB-GENE-131125-7]
51. si:dkey-111m11.1 si:dkey-111m11.1 1 1 1.000 - - - - - - - -
52. PCDH10 PCDH10 7 1 - - - 1.000 - - - - -
53. si:dkey-121b10.8 si:dkey-121b10.8 3 1 - - - 1.000 - - - - -
54. si:dkey-101n15.3 si:dkey-101n15.3 1 1 - - - 1.000 - - - - -
55. wu:fe11b02_1 wu:fe11b02_1 7 1 1.000 - - - - - - - -
56. zgc:172270 ENSDARG00000003632, ENSDARG00000111414 58 1 1.000 - - - - - - - - zgc:172270 [Source:ZFIN;Acc:ZDB-GENE-080204-67]
57. CR383676.3_2 CR383676.3_2 9 1 1.000 - - - - - - - -
58. cthrc1b ENSDARG00000001971 44 1 1.000 - - - - - - - - collagen triple helix repeat containing 1b [Source:ZFIN;Acc:ZDB-GENE-050420-46]
59. CAMK1 CAMK1 28 1 1.000 - - - - - - - -
60. si:ch1073-219n12.1 71 1 - - - 1.000 - - - - - si:ch1073-219n12.1, transcript variant X1
61. U5_3 U5_3 3 1 1.000 - - - - - - - -
62. si:ch73-36i7.2 si:ch73-36i7.2 5 1 - - - 1.000 - - - - -
63. nfatc1 ENSDARG00000036168 16 1 1.000 - - - - - - - - nuclear factor of activated T cells 1 [Source:ZFIN;Acc:ZDB-GENE-060503-677]
64. si:ch73-7i4.1 ENSDARG00000094554 771 1 1.000 - - - - - - - - si:ch73-7i4.1 [Source:ZFIN;Acc:ZDB-GENE-100921-19]
65. C6H1orf74 C6H1orf74 53 1 1.000 - - - - - - - -
66. CU570689.1 ENSDARG00000096111 0 1 - - - 1.000 - - - - -
67. mir196b ENSDARG00000081346 35 1 1.000 - - - - - - - - microRNA 196b [Source:ZFIN;Acc:ZDB-MIRNAG-081212-1]
68. si:ch211-265g21.1 si:ch211-265g21.1 35 1 1.000 - - - - - - - -
69. ugt5c2 ENSDARG00000006372 11 1 1.000 - - - - - - - - UDP glucuronosyltransferase 5 family, polypeptide C2 [Source:ZFIN;Acc:ZDB-GENE-060825-206]
70. lrrc18b ENSDARG00000076236 5 1 1.000 - - - - - - - - leucine rich repeat containing 18b [Source:ZFIN;Acc:ZDB-GENE-110315-1]
71. snR50 snR50 1 1 - - - 1.000 - - - - -
72. si:ch73-138e16.2 ENSDARG00000104894 1 1 - - - - - - - 1.000 - si:ch73-138e16.2 [Source:ZFIN;Acc:ZDB-GENE-070705-201]
73. TRIM35 TRIM35 100 1 1.000 - - - - - - - -
74. grin2ab ENSDARG00000070543 31 1 1.000 - - - - - - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2A, b [Source:ZFIN;Acc:ZDB-GENE-070424-223]
75. AL935174.1 ENSDARG00000109674 18 1 1.000 - - - - - - - -
76. rftn1a ENSDARG00000070831 5 1 - - - - - - - 1.000 - raftlin, lipid raft linker 1a [Source:ZFIN;Acc:ZDB-GENE-060503-293]
77. CYP46A1 CYP46A1 16 1 - - - - - - - 1.000 -
78. gpat2 ENSDARG00000053575 12 1 1.000 - - - - - - - - glycerol-3-phosphate acyltransferase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050309-118]
79. ENSDARG00000093467 ENSDARG00000093467 34 1 1.000 - - - - - - - -
80. CABZ01111604.1 CABZ01111604.1 140 1 - - - 1.000 - - - - -
81. CU695006.2 CU695006.2 1 1 - - - 1.000 - - - - -
82. si:dkey-113d16.9 si:dkey-113d16.9 345 1 1.000 - - - - - - - -
83. si:dkey-111b14.3 si:dkey-111b14.3 7 1 - - - 1.000 - - - - -
84. CT573234.2 CT573234.2 1 1 - - - - - - - 1.000 -
85. man2a1 ENSDARG00000102200 12 1 1.000 - - - - - - - - mannosidase, alpha, class 2A, member 1 [Source:ZFIN;Acc:ZDB-GENE-060526-31]
86. pxmp2 ENSDARG00000003144 50 1 1.000 - - - - - - - - peroxisomal membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-040912-184]
87. upk1a ENSDARG00000021866 9 1 - - - 1.000 - - - - - uroplakin 1a [Source:ZFIN;Acc:ZDB-GENE-060421-2603]
88. CD200_2 CD200_2 47 1 1.000 - - - - - - - -
89. cd44a ENSDARG00000087863 4 1 1.000 - - - - - - - - CD44 molecule (Indian blood group) a [Source:ZFIN;Acc:ZDB-GENE-110429-1]
90. NHSL1 NHSL1 182 1 1.000 - - - - - - - -
91. UBASH3B_1 UBASH3B_1 28 1 1.000 - - - - - - - -
92. agfg1a ENSDARG00000030020 6 1 - - - 1.000 - - - - - ArfGAP with FG repeats 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5808]
93. CR352226.3 ENSDARG00000095872 0 1 - - - 1.000 - - - - -
94. ugt5b3 ENSDARG00000099276 2 1 - - - - - - - 1.000 - UDP glucuronosyltransferase 5 family, polypeptide B3 [Source:ZFIN;Acc:ZDB-GENE-100406-5]
95. si:dkey-254e13.13 si:dkey-254e13.13 6 1 1.000 - - - - - - - -
96. rnf150a_1 ENSDARG00000024827 12 1 - - - 1.000 - - - - - ring finger protein 150a [Source:ZFIN;Acc:ZDB-GENE-060213-1]
97. es1 ENSDARG00000094516 2 1 - - - 1.000 - - - - - es1 protein [Source:ZFIN;Acc:ZDB-GENE-980526-188]
98. TENM3 ENSDARG00000005479 39 1 1.000 - - - - - - - - teneurin transmembrane protein 3 [Source:ZFIN;Acc:ZDB-GENE-990714-19]
99. cpn1_2 ENSDARG00000005185, ENSDARG00000096728 14 1 1.000 - - - - - - - - carboxypeptidase N, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9116]
100. zgc:112234_6 ENSDARG00000099514, ENSDARG00000102806, ENSDARG00000104588, ENSDARG00000105340, ENSDARG00000105393, ENSDARG00000105414, ENSDARG00000105468, ENSDARG00000105483, ENSDARG00000105507, ENSDARG00000111934 4 1 1.000 - - - - - - - - zgc:112234 [Source:NCBI gene;Acc:554097]

There are 328 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA