Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for snR50

Gene Name Gene ID Reads Annotation
snR50 snR50 1










Genes with expression patterns similar to snR50

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. snR50 snR50 1 3 - - - 1.000 - 1.000 - - 1.000
2. ccdc14 ENSDARG00000098734 3 1.811 - - - 0.811 - 1.000 - - - coiled-coil domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-120215-134]
3. si:dkey-14o6.7 si:dkey-14o6.7 9 1.805 - - - 1.000 - - - - 0.805
4. XRCC2 ENSDARG00000013933 15 1.79 - - - 0.790 - - - - 1.000 X-ray repair cross complementing 2 [Source:HGNC Symbol;Acc:HGNC:12829]
5. cdh10 cdh10 38 1.645 - - - 0.702 - 0.943 - - -
6. si:ch211-225p5.3 si:ch211-225p5.3 10 1 - - - 1.000 - - - - -
7. si:dkey-149m13.1 si:dkey-149m13.1 6 1 - - - 1.000 - - - - -
8. ripply2 ENSDARG00000070535 18 1 - - - - - 1.000 - - - ripply transcriptional repressor 2 [Source:ZFIN;Acc:ZDB-GENE-060113-2]
9. tirap ENSDARG00000074371 10 1 - - - - - - - - 1.000 toll-interleukin 1 receptor (TIR) domain containing adaptor protein [Source:ZFIN;Acc:ZDB-GENE-040219-4]
10. si:ch211-121a2.3 si:ch211-121a2.3 1 1 - - - 1.000 - - - - -
11. HMGXB3 ENSDARG00000077823 2 1 - - - - - 1.000 - - - HMG box domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-111012-1]
12. CR846080.4 CR846080.4 6 1 - - - - - - - - 1.000
13. mhc1uma ENSDARG00000039164 16 1 - - - 1.000 - - - - - major histocompatibility complex class I UMA [Source:ZFIN;Acc:ZDB-GENE-140820-1]
14. CR631122.1 ENSDARG00000044534 8 1 - - - - - - - - 1.000 protein RD3-like [Source:NCBI gene;Acc:100149591]
15. CELA1_2 CELA1_2 2 1 - - - - - 1.000 - - -
16. m17 ENSDARG00000035435 28 1 - - - - - 1.000 - - - IL-6 subfamily cytokine M17 [Source:ZFIN;Acc:ZDB-GENE-060526-368]
17. CMA1_8 CMA1_8 10 1 - - - - - 1.000 - - -
18. naa40_1 ENSDARG00000024109, ENSDARG00000090570 1 1 - - - 1.000 - - - - - N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-105]
19. si:dkey-9a20.8 si:dkey-9a20.8 8 1 - - - - - - - - 1.000
20. si:ch211-218m3.13 ENSDARG00000053779 0 1 - - - 1.000 - - - - - si:ch211-218m3.13 [Source:ZFIN;Acc:ZDB-GENE-091113-55]
21. CNTNAP5 CNTNAP5 20 1 - - - 1.000 - - - - -
22. si:dkey-1b17.11 si:dkey-1b17.11 3 1 - - - 1.000 - - - - -
23. CABZ01071058.1 CABZ01071058.1 4 1 - - - 1.000 - - - - -
24. si:ch211-145h19.2 7 1 - - - - - - - - 1.000 si:ch211-145h19.2
25. syndig1l ENSDARG00000042390, ENSDARG00000113400 17 1 - - - - - 1.000 - - - synapse differentiation inducing 1-like [Source:ZFIN;Acc:ZDB-GENE-041001-116]
26. si:dkeyp-46h3.3 ENSDARG00000092887 11 1 - - - - - - - - 1.000 si:dkeyp-46h3.3 [Source:ZFIN;Acc:ZDB-GENE-060503-748]
27. v2rh11 ENSDARG00000115088 1 1 - - - - - 1.000 - - - vomeronasal 2 receptor, h11 [Source:ZFIN;Acc:ZDB-GENE-050419-222]
28. sts ENSDARG00000053241 10 1 - - - - - - - - 1.000 steroid sulfatase (microsomal), isozyme S [Source:ZFIN;Acc:ZDB-GENE-030717-5]
29. nog3 ENSDARG00000053528, ENSDARG00000116141, ENSDARG00000116361 1 1 - - - - - - - - 1.000 noggin 3 [Source:ZFIN;Acc:ZDB-GENE-990714-8]
30. CABZ01074423.1 CABZ01074423.1 8 1 - - - 1.000 - - - - -
31. KCNT1 ENSDARG00000079484 0 1 - - - 1.000 - - - - - potassium channel, subfamily T, member 1 [Source:ZFIN;Acc:ZDB-GENE-091231-1]
32. prlhr2a ENSDARG00000044900 0 1 - - - 1.000 - - - - - prolactin releasing hormone receptor 2a [Source:ZFIN;Acc:ZDB-GENE-060209-1]
33. slc25a19 ENSDARG00000100385 2 1 - - - - - 1.000 - - - solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19 [Source:ZFIN;Acc:ZDB-GENE-050417-292]
34. HIST2H4A HIST2H4A 33 1 - - - 1.000 - - - - -
35. BX248410.1 ENSDARG00000090038 3 1 - - - 1.000 - - - - - Schwann cell myelin protein-like [Source:NCBI gene;Acc:101884775]
36. si:dkey-176f19.2 si:dkey-176f19.2 6 1 - - - 1.000 - - - - -
37. BX323793.3 BX323793.3 7 1 - - - - - 1.000 - - -
38. SNORD57 SNORD57 2 1 - - - 1.000 - - - - -
39. POGK POGK 1 1 - - - - - 1.000 - - -
40. zgc:112958 zgc:112958 5 1 - - - 1.000 - - - - -
41. gp1bb ENSDARG00000074441 116 1 - - - - - 1.000 - - - glycoprotein Ib platelet subunit beta [Source:ZFIN;Acc:ZDB-GENE-081104-406]
42. PDILT PDILT 6 1 - - - 1.000 - - - - -
43. BX284672.1 BX284672.1 11 1 - - - - - 1.000 - - -
44. GCSH GCSH 0 1 - - - 1.000 - - - - -
45. si:dkey-263b2.2 si:dkey-263b2.2 1 1 - - - 1.000 - - - - -
46. mib mib 1 1 - - - - - - - - 1.000
47. NMI 3 1 - - - - - 1.000 - - - N-myc (and STAT) interactor
48. BX649314.1 BX649314.1 3 1 - - - - - - - - 1.000
49. CABZ01071177.1 CABZ01071177.1 1 1 - - - - - - - - 1.000
50. ZDHHC1 ENSDARG00000077546 14 1 - - - 1.000 - - - - - zinc finger, DHHC-type containing 1 [Source:ZFIN;Acc:ZDB-GENE-130925-1]
51. fgf9 ENSDARG00000078625 2 1 - - - 1.000 - - - - - fibroblast growth factor 9 [Source:ZFIN;Acc:ZDB-GENE-070424-238]
52. adarb2 ENSDARG00000071823 1 1 - - - - - - - - 1.000 adenosine deaminase, RNA-specific, B2 (non-functional) [Source:ZFIN;Acc:ZDB-GENE-060503-160]
53. C2CD4C C2CD4C 4 1 - - - - - - - - 1.000
54. ucmaa ENSDARG00000027799 2 1 - - - 1.000 - - - - - upper zone of growth plate and cartilage matrix associated a [Source:ZFIN;Acc:ZDB-GENE-070410-71]
55. BICD1 BICD1 9 1 - - - - - 1.000 - - -
56. NAT14 ENSDARG00000115349 21 1 - - - - - 1.000 - - - N-acetyltransferase 14 (GCN5-related, putative) [Source:ZFIN;Acc:ZDB-GENE-060825-15]
57. CR936371.2 ENSDARG00000117302 2 1 - - - - - - - - 1.000
58. zgc:171731 ENSDARG00000014657, ENSDARG00000112592 5 1 - - - 1.000 - - - - - zgc:171731 [Source:ZFIN;Acc:ZDB-GENE-071004-27]
59. rsad2 ENSDARG00000004952 1 1 - - - 1.000 - - - - - radical S-adenosyl methionine domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-050913-129]
60. ccdc41 ccdc41 97 1 - - - - - 1.000 - - -
61. WNK4 WNK4 0 1 - - - - - - - - 1.000
62. irf1b ENSDARG00000043249 30 1 - - - - - 1.000 - - - interferon regulatory factor 1b [Source:ZFIN;Acc:ZDB-GENE-041114-13]
63. crybb1l2 ENSDARG00000016793 723 1 - - - - - 1.000 - - - crystallin, beta B1, like 2 [Source:ZFIN;Acc:ZDB-GENE-070822-18]
64. SBSPON ENSDARG00000110160 2 1 - - - - - - - - 1.000 somatomedin B and thrombospondin type 1 domain containing [Source:HGNC Symbol;Acc:HGNC:30362]
65. si:dkey-249p7.4 ENSDARG00000096663 9 1 - - - 1.000 - - - - - si:dkey-249p7.4 [Source:ZFIN;Acc:ZDB-GENE-121214-270]
66. sh2d4b sh2d4b 1 1 - - - - - - - - 1.000
67. syt6a ENSDARG00000076730 4 1 - - - - - 1.000 - - - synaptotagmin VIa [Source:ZFIN;Acc:ZDB-GENE-090601-2]
68. U5_7 U5_7 0 1 - - - - - - - - 1.000
69. CABZ01019905.2 CABZ01019905.2 1 1 - - - - - - - - 1.000
70. rhobtb2b ENSDARG00000089340 4 1 - - - - - 1.000 - - - Rho related BTB domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-071125-1]
71. DIAPH2 ENSDARG00000076060 1 1 - - - - - - - - 1.000 diaphanous-related formin 2 [Source:ZFIN;Acc:ZDB-GENE-090115-1]
72. CT573264.1 ENSDARG00000110089 0 1 - - - - - - - - 1.000
73. ppp4r1 ENSDARG00000101316 1 1 - - - - - - - - 1.000 protein phosphatase 4, regulatory subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040426-753]
74. phox2ba ENSDARG00000075330 1 1 - - - 1.000 - - - - - paired-like homeobox 2ba [Source:ZFIN;Acc:ZDB-GENE-090313-51]
75. hdhd2 ENSDARG00000024728 5 1 - - - 1.000 - - - - - haloacid dehalogenase-like hydrolase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-050320-37]
76. oscp1a ENSDARG00000101222, ENSDARG00000104403 17 1 - - - - - 1.000 - - - organic solute carrier partner 1a [Source:ZFIN;Acc:ZDB-GENE-080204-2]
77. FAM160A1 FAM160A1 1 1 - - - 1.000 - - - - -
78. CABZ01112210.1 CABZ01112210.1 48 1 - - - - - 1.000 - - -
79. CMA1 CMA1 0 1 - - - 1.000 - - - - -
80. ugt5c1 ENSDARG00000061444 6 1 - - - - - - - - 1.000 UDP glucuronosyltransferase 5 family, polypeptide C1 [Source:ZFIN;Acc:ZDB-GENE-050419-68]
81. TMEM121_1 TMEM121_1 22 1 - - - - - 1.000 - - -
82. URB1 ENSDARG00000060308 78 1 - - - - - 1.000 - - - URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5181]
83. si:dkey-11f4.7 ENSDARG00000099207 1 1 - - - 1.000 - - - - - si:dkey-11f4.7 [Source:ZFIN;Acc:ZDB-GENE-070912-361]
84. si:dkey-14d8.2 38 1 - - - - - - - - 1.000 si:dkey-14d8.2
85. veph veph 3 1 - - - 1.000 - - - - -
86. si:ch211-13b16.1 si:ch211-13b16.1 1 1 - - - 1.000 - - - - -
87. PRTFDC1 ENSDARG00000011683 11 1 - - - - - 1.000 - - - phosphoribosyl transferase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-980526-324]
88. tectb ENSDARG00000045268 3 1 - - - 1.000 - - - - - tectorin beta [Source:ZFIN;Acc:ZDB-GENE-041212-16]
89. zgc:153759 ENSDARG00000068969, ENSDARG00000092381 44 1 - - - - - 1.000 - - - zgc:153759 [Source:ZFIN;Acc:ZDB-GENE-060825-148]
90. slc13a1 ENSDARG00000045638, ENSDARG00000114835 13 1 - - - 1.000 - - - - - solute carrier family 13 member 1 [Source:ZFIN;Acc:ZDB-GENE-031222-3]
91. si:ch211-254p10.3 si:ch211-254p10.3 5 1 - - - - - - - - 1.000
92. si:dkey-240h12.3 ENSDARG00000095458 7 1 - - - - - - - - 1.000 si:dkey-240h12.3 [Source:ZFIN;Acc:ZDB-GENE-070705-405]
93. themis ENSDARG00000010619 5 1 - - - - - 1.000 - - - thymocyte selection associated [Source:ZFIN;Acc:ZDB-GENE-041008-160]
94. ftr76 ENSDARG00000076093 1 1 - - - 1.000 - - - - - finTRIM family, member 76 [Source:ZFIN;Acc:ZDB-GENE-090508-15]
95. FAM196A 82 1 - - - - - 1.000 - - - family with sequence similarity 196 member A
96. tmem167b ENSDARG00000059400 9 1 - - - - - - - - 1.000 transmembrane protein 167B [Source:ZFIN;Acc:ZDB-GENE-040808-17]
97. TNFRSF14_1 TNFRSF14_1 165 1 - - - - - - - - 1.000
98. NOX4 3 1 - - - - - 1.000 - - - NADPH oxidase 4
99. si:ch1073-47b13.2 si:ch1073-47b13.2 3 1 - - - 1.000 - - - - -
100. TGFBR2 TGFBR2 2 1 - - - - - 1.000 - - -

There are 415 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA