Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch1073-219n12.1

Gene Name Gene ID Reads Annotation
si:ch1073-219n12.1 71 si:ch1073-219n12.1, transcript variant X1










Genes with expression patterns similar to si:ch1073-219n12.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch1073-219n12.1 71 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch1073-219n12.1, transcript variant X1
2. gdf11 ENSDARG00000044924 534 2.412 0.905 0.787 - - - 0.720 - - - growth differentiation factor 11 [Source:ZFIN;Acc:ZDB-GENE-040427-2]
3. si:ch73-36i7.2 si:ch73-36i7.2 5 2 - - - 1.000 - 1.000 - - -
4. PCDH10 PCDH10 7 2 - - - 1.000 - 1.000 - - -
5. si:ch211-202m22.1 ENSDARG00000094491 24 1.935 - - - - - 1.000 - - 0.935 si:ch211-202m22.1 [Source:ZFIN;Acc:ZDB-GENE-060531-31]
6. si:ch211-12e1.5 si:ch211-12e1.5 14 1.895 0.895 - - - - 1.000 - - -
7. si:dkey-6a5.10 si:dkey-6a5.10 17 1.895 0.895 - - - - 1.000 - - -
8. zgc:171759_2 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 48 1.867 0.867 - - - - 1.000 - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
9. asic4a ENSDARG00000025162 25 1.84 - - - - - 1.000 - - 0.840 acid-sensing (proton-gated) ion channel family member 4a [Source:ZFIN;Acc:ZDB-GENE-040513-5]
10. mdm1 ENSDARG00000045675 64 1.787 - 0.787 - - - 1.000 - - - Mdm1 nuclear protein homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-041210-117]
11. gng2 ENSDARG00000056831 81 1.77 0.770 - - - - 1.000 - - - guanine nucleotide binding protein (G protein), gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050417-59]
12. rnf165a ENSDARG00000077906 133 1.758 - 0.758 - - - 1.000 - - - ring finger protein 165a [Source:ZFIN;Acc:ZDB-GENE-091118-64]
13. CU633848.1 CU633848.1 4 1.742 - - - - - 1.000 0.742 - -
14. slc13a1 ENSDARG00000045638, ENSDARG00000114835 13 1.742 - - - 1.000 - - 0.742 - - solute carrier family 13 member 1 [Source:ZFIN;Acc:ZDB-GENE-031222-3]
15. tceanc2 ENSDARG00000062919 32 1.742 - - - - - 1.000 0.742 - - transcription elongation factor A (SII) N-terminal and central domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070705-486]
16. si:dkey-162b3.5 si:dkey-162b3.5 24 1.742 - - - - - 1.000 0.742 - -
17. CR339051.1 CR339051.1 9 1.742 - - - - - 1.000 0.742 - -
18. cdc42ep2 ENSDARG00000053959 32 1.742 - - - - - 1.000 0.742 - - CDC42 effector protein (Rho GTPase binding) 2 [Source:ZFIN;Acc:ZDB-GENE-050320-104]
19. crlf1b ENSDARG00000006368 14 1.736 - - - 0.817 - - - - 0.919 cytokine receptor-like factor 1b [Source:ZFIN;Acc:ZDB-GENE-080108-1]
20. zgc:195245 ENSDARG00000078917, ENSDARG00000115812 49 1.688 - - - - - 0.937 0.751 - - zgc:195245 [Source:ZFIN;Acc:ZDB-GENE-081022-200]
21. zgc:103508 ENSDARG00000099273 50 1.681 0.878 - - - - - 0.803 - - zgc:103508 [Source:ZFIN;Acc:ZDB-GENE-041212-28]
22. rgs9b ENSDARG00000045156, ENSDARG00000111650 77 1.637 0.895 - - - - - 0.742 - - regulator of G protein signaling 9b [Source:ZFIN;Acc:ZDB-GENE-040426-1708]
23. SNORD36_1 SNORD36_1 44 1.619 - 0.715 - - - - - - 0.904
24. sst3 61 1.604 - - - - - 0.862 0.742 - - somatostatin 3
25. si:dkey-260c8.4 si:dkey-260c8.4 106 1.578 0.823 - - - - - - - 0.755
26. foxd5 ENSDARG00000042485, ENSDARG00000109712 216 1.55 - - - - - - 0.841 - 0.709 forkhead box D5 [Source:ZFIN;Acc:ZDB-GENE-980605-4]
27. ANO7 ANO7 54 1.524 - - - - - - 0.701 - 0.823
28. wu:fb37b09 wu:fb37b09 10685 1.519 0.777 - - - - - 0.742 - -
29. brinp3b ENSDARG00000075352 14 1.513 - - - - - 0.771 0.742 - - bone morphogenetic protein/retinoic acid inducible neural-specific 3b [Source:ZFIN;Acc:ZDB-GENE-121022-1]
30. akap9 ENSDARG00000079610 654 1.496 0.790 0.706 - - - - - - - A kinase (PRKA) anchor protein 9 [Source:ZFIN;Acc:ZDB-GENE-030131-7276]
31. zbtb12.2 ENSDARG00000070658 55 1.48 - - - - - 0.771 0.709 - - zinc finger and BTB domain containing 12, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060503-27]
32. CCDC74B CCDC74B 8 1.473 - - - 0.731 - - 0.742 - -
33. BX897671.1 BX897671.1 10 1.47 - - - - - 0.728 0.742 - -
34. trim35-40 ENSDARG00000042116 398 1.45 0.736 0.714 - - - - - - - tripartite motif containing 35-40 [Source:ZFIN;Acc:ZDB-GENE-030131-6081]
35. BX005082.1 ENSDARG00000098558 2 1 - - - 1.000 - - - - -
36. mapk8a ENSDARG00000031888 44 1 - - - - - - 1.000 - - mitogen-activated protein kinase 8a [Source:ZFIN;Acc:ZDB-GENE-080218-17]
37. serpine3 ENSDARG00000057108 49 1 - - - - - 1.000 - - - serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3 [Source:ZFIN;Acc:ZDB-GENE-050309-223]
38. rnaset2l ENSDARG00000058413 17 1 - - - - - 1.000 - - - ribonuclease T2, like [Source:ZFIN;Acc:ZDB-GENE-090819-2]
39. pgap2 ENSDARG00000044596 60 1 - - - - - 1.000 - - - post-GPI attachment to proteins 2 [Source:ZFIN;Acc:ZDB-GENE-050320-119]
40. GBGT1_1 GBGT1_1 19 1 - - - - - 1.000 - - -
41. TMEM240 TMEM240 13 1 - - - - - 1.000 - - -
42. si:dkey-37m8.8 si:dkey-37m8.8 1 1 - - - 1.000 - - - - -
43. nphp1 ENSDARG00000009046, ENSDARG00000113790 104 1 - - - - - 1.000 - - - nephronophthisis 1 [Source:ZFIN;Acc:ZDB-GENE-060929-1234]
44. trpm2 ENSDARG00000095696, ENSDARG00000101641 1 1 - - - 1.000 - - - - - transient receptor potential cation channel, subfamily M, member 2 [Source:ZFIN;Acc:ZDB-GENE-061214-4]
45. SNORA23 SNORA23 1 1 - - - - - 1.000 - - -
46. FAM78A FAM78A 61 1 - - - - - 1.000 - - -
47. CABZ01001466.1 CABZ01001466.1 1 1 - - - 1.000 - - - - -
48. DIP2B DIP2B 18 1 - - - - - 1.000 - - -
49. SNORA68 SNORA68 1 1 - - - 1.000 - - - - -
50. cul4a ENSDARG00000096578 14 1 - - - - - 1.000 - - - cullin 4A [Source:ZFIN;Acc:ZDB-GENE-040426-1357]
51. hif1al2 ENSDARG00000044550 140 1 - - - - - 1.000 - - - hypoxia inducible factor 1 subunit alpha, like 2 [Source:ZFIN;Acc:ZDB-GENE-050211-2]
52. CABZ01113374.2 CABZ01113374.2 27 1 - - - - - 1.000 - - -
53. CABZ01069081.1 CABZ01069081.1 16 1 - - - - - 1.000 - - -
54. wdr65 wdr65 251 1 - - - - - 1.000 - - -
55. HSPA8 ENSDARG00000068992, ENSDARG00000114726 120 1 - - - - - 1.000 - - - heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
56. si:ch211-113a14.24 ENSDARG00000051718 183 1 - - - - - 1.000 - - - si:ch211-113a14.24 [Source:ZFIN;Acc:ZDB-GENE-121214-122]
57. si:ch211-59m15.2 si:ch211-59m15.2 3 1 - - - - - 1.000 - - -
58. PHKA1 PHKA1 10 1 - - - - - 1.000 - - -
59. bbs5 ENSDARG00000039827 211 1 - - - - - 1.000 - - - Bardet-Biedl syndrome 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1083]
60. rpap3 ENSDARG00000087962 22 1 - - - 1.000 - - - - - RNA polymerase II associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-928]
61. cngb3 cngb3 12 1 - - - - - 1.000 - - -
62. BX511066.4 BX511066.4 6 1 - - - 1.000 - - - - -
63. antxr1d ENSDARG00000060845 10 1 - - - - - 1.000 - - - ANTXR cell adhesion molecule 1d [Source:ZFIN;Acc:ZDB-GENE-090313-28]
64. mctp1b ENSDARG00000060871 20 1 - - - - - 1.000 - - - multiple C2 domains, transmembrane 1b [Source:ZFIN;Acc:ZDB-GENE-090313-382]
65. CABZ01049059.1 CABZ01049059.1 0 1 - - - - - 1.000 - - -
66. si:dkey-248g17.3 si:dkey-248g17.3 34 1 - - - - - 1.000 - - -
67. KCNB1 ENSDARG00000060095, ENSDARG00000112775 5 1 - - - 1.000 - - - - - potassium voltage-gated channel, Shab-related subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-090831-3]
68. CABZ01087111.1 CABZ01087111.1 42 1 - - - - - 1.000 - - -
69. si:dkey-185p13.1 ENSDARG00000095837 12 1 - - - 1.000 - - - - - si:dkey-185p13.1 [Source:ZFIN;Acc:ZDB-GENE-110411-125]
70. FDFT1 ENSDARG00000101062 6 1 - - - - - 1.000 - - - farnesyl-diphosphate farnesyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-081104-242]
71. BX640518.1 BX640518.1 24 1 - - - - - 1.000 - - -
72. mos ENSDARG00000069744, ENSDARG00000110060, ENSDARG00000110181 11 1 - - - - - 1.000 - - - v-mos Moloney murine sarcoma viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040428-3]
73. zgc:113516 20 1 - - - - - 1.000 - - - zgc:113516
74. arhgap23b ENSDARG00000026840 6 1 - - - - - 1.000 - - - Rho GTPase activating protein 23b [Source:ZFIN;Acc:ZDB-GENE-081031-78]
75. pcdh15b ENSDARG00000008127 2 1 - - - - - 1.000 - - - protocadherin-related 15b [Source:ZFIN;Acc:ZDB-GENE-050214-1]
76. aqp1a.2 ENSDARG00000091027 6 1 - - - - - 1.000 - - - aquaporin 1a (Colton blood group), tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-100409-1]
77. rpz3 ENSDARG00000069728 11 1 - - - - - 1.000 - - - rapunzel 3 [Source:ZFIN;Acc:ZDB-GENE-030131-4784]
78. si:dkey-222o15.5 si:dkey-222o15.5 27 1 - - - 1.000 - - - - -
79. LRRK1_1 LRRK1_1 11 1 - - - - - 1.000 - - -
80. ENKD1 ENSDARG00000043550 44 1 - - - - - 1.000 - - - enkurin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25246]
81. im:7151068 im:7151068 2 1 - - - 1.000 - - - - -
82. ush2a ENSDARG00000029482 10 1 - - - - - 1.000 - - - Usher syndrome 2A (autosomal recessive, mild) [Source:ZFIN;Acc:ZDB-GENE-060503-794]
83. phc3 ENSDARG00000074604 2 1 - - - 1.000 - - - - - polyhomeotic homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070912-369]
84. ctrb1 ENSDARG00000090428, ENSDARG00000110297 1 1 - - - - - 1.000 - - - chymotrypsinogen B1 [Source:ZFIN;Acc:ZDB-GENE-030131-1171]
85. ahr1b ENSDARG00000023537 44 1 - - - - - 1.000 - - - aryl hydrocarbon receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050922-1]
86. si:ch211-3o3.8 si:ch211-3o3.8 2 1 - - - - - 1.000 - - -
87. CABZ01031627.2 CABZ01031627.2 1 1 - - - - - 1.000 - - -
88. RBM20 74 1 - - - - - 1.000 - - - RNA binding motif protein 20, transcript variant X1
89. SNORD35_2 SNORD35_2 5 1 - - - 1.000 - - - - -
90. snf8 ENSDARG00000058076 384 1 - - - - - 1.000 - - - SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041114-117]
91. si:ch211-268b13.6 si:ch211-268b13.6 0 1 - - - - - 1.000 - - -
92. si:ch211-113a14.19_4 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 18 1 - - - - - 1.000 - - - si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
93. si:ch211-196c10.5 si:ch211-196c10.5 3 1 - - - - - 1.000 - - -
94. olig1 ENSDARG00000040948 1 1 - - - 1.000 - - - - - oligodendrocyte transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050107-2]
95. emc4 ENSDARG00000039268 553 1 - - - - - 1.000 - - - ER membrane protein complex subunit 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1891]
96. dnaaf3 ENSDARG00000092662 20 1 - - - 1.000 - - - - - dynein, axonemal, assembly factor 3 [Source:ZFIN;Acc:ZDB-GENE-091204-296]
97. antxr2a ENSDARG00000104118, ENSDARG00000111517 12 1 - - - 1.000 - - - - - ANTXR cell adhesion molecule 2a [Source:ZFIN;Acc:ZDB-GENE-060526-14]
98. mir124-6 64 1 - - - - - 1.000 - - - microRNA 124-6
99. si:ch211-10j20.4 si:ch211-10j20.4 0 1 - - - - - 1.000 - - -
100. si:dkey-40n15.1 ENSDARG00000116117 1 1 - - - - - 1.000 - - - si:dkey-40n15.1 [Source:ZFIN;Acc:ZDB-GENE-110914-64]

There are 1002 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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