Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for trim35-40

Gene Name Gene ID Reads Annotation
trim35-40 ENSDARG00000042116 398 tripartite motif containing 35-40 [Source:ZFIN;Acc:ZDB-GENE-030131-6081]










Genes with expression patterns similar to trim35-40

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. trim35-40 ENSDARG00000042116 398 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tripartite motif containing 35-40 [Source:ZFIN;Acc:ZDB-GENE-030131-6081]
2. tgs1 190 1.649 - 0.794 - - - - - 0.855 - trimethylguanosine synthase 1, transcript variant X1
3. si:ch211-76l23.6 si:ch211-76l23.6 68 1.626 - 0.750 - - - - - 0.876 -
4. chsy3 ENSDARG00000069472 271 1.615 0.763 - - - - - - 0.852 - chondroitin sulfate synthase 3 [Source:ZFIN;Acc:ZDB-GENE-030616-4]
5. pcyt1ba ENSDARG00000058162 206 1.613 - - - - 0.754 - - 0.859 - phosphate cytidylyltransferase 1, choline, beta a [Source:ZFIN;Acc:ZDB-GENE-061220-4]
6. MRAS ENSDARG00000075285 260 1.612 - - - - - - 0.724 0.888 - muscle RAS oncogene homolog [Source:HGNC Symbol;Acc:HGNC:7227]
7. uso1 ENSDARG00000019581 479 1.607 0.752 - - - - - - 0.855 - USO1 vesicle transport factor [Source:ZFIN;Acc:ZDB-GENE-040426-688]
8. dapk1 ENSDARG00000060093 351 1.587 0.772 - - - - - - 0.815 - death-associated protein kinase 1 [Source:ZFIN;Acc:ZDB-GENE-060526-177]
9. trim13 ENSDARG00000010010, ENSDARG00000110876, ENSDARG00000114862 767 1.582 0.764 - - - - - - 0.818 - tripartite motif containing 13 [Source:ZFIN;Acc:ZDB-GENE-050522-516]
10. gdf11 ENSDARG00000044924 534 1.575 0.824 0.751 - - - - - - - growth differentiation factor 11 [Source:ZFIN;Acc:ZDB-GENE-040427-2]
11. hs3st1l2 ENSDARG00000035578 279 1.565 0.815 - - - - - - 0.750 - heparan sulfate (glucosamine) 3-O-sulfotransferase 1-like 2 [Source:ZFIN;Acc:ZDB-GENE-070202-3]
12. aga ENSDARG00000004889, ENSDARG00000114305 368 1.559 0.854 - - - - - 0.705 - - aspartylglucosaminidase [Source:ZFIN;Acc:ZDB-GENE-040426-2311]
13. phf23a ENSDARG00000030887, ENSDARG00000115791 1918 1.549 - - - - - 0.771 - 0.778 - PHD finger protein 23a [Source:ZFIN;Acc:ZDB-GENE-050320-67]
14. WDR48 WDR48 448 1.538 0.702 - - - - - - 0.836 -
15. wnt3 ENSDARG00000038990, ENSDARG00000111277 626 1.53 - - - - - - 0.753 0.777 - wingless-type MMTV integration site family, member 3 [Source:ZFIN;Acc:ZDB-GENE-081003-1]
16. ssbp1 ENSDARG00000039350 809 1.515 - 0.731 - - - - - 0.784 - single-stranded DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-340]
17. zgc:174178 zgc:174178 104 1.504 0.787 0.717 - - - - - - -
18. btr21 ENSDARG00000058329, ENSDARG00000100450 120 1.5 0.772 - - - - - 0.728 - - bloodthirsty-related gene family, member 21 [Source:ZFIN;Acc:ZDB-GENE-081031-80]
19. fzd10 ENSDARG00000068213 1364 1.49 - - - - - - 0.757 0.733 - frizzled class receptor 10 [Source:ZFIN;Acc:ZDB-GENE-990415-220]
20. lysmd3 ENSDARG00000024693 754 1.483 - - - - - 0.707 0.776 - - LysM, putative peptidoglycan-binding, domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040625-88]
21. dixdc1a ENSDARG00000025302 716 1.47 - 0.725 - - - - - 0.745 - DIX domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030721-2]
22. foxq1b ENSDARG00000055395 549 1.463 0.755 - - - - - 0.708 - - forkhead box Q1b [Source:ZFIN;Acc:ZDB-GENE-040426-2090]
23. nsun3 ENSDARG00000013023 136 1.463 - 0.723 - - - - 0.740 - - NOP2/Sun domain family, member 3 [Source:ZFIN;Acc:ZDB-GENE-050706-95]
24. si:ch1073-219n12.1 71 1.45 0.736 0.714 - - - - - - - si:ch1073-219n12.1, transcript variant X1
25. DTX2 ENSDARG00000032933, ENSDARG00000109243 909 1.434 - - - - - 0.705 - 0.729 - deltex 2, E3 ubiquitin ligase [Source:ZFIN;Acc:ZDB-GENE-081022-150]
26. gas2l3 ENSDARG00000045880 614 0.949 - 0.949 - - - - - - - growth arrest-specific 2 like 3 [Source:ZFIN;Acc:ZDB-GENE-030131-2560]
27. TMEM150A TMEM150A 975 0.936 - - - - - - - 0.936 -
28. tnfrsf1b ENSDARG00000070165 467 0.931 - - - - - - - 0.931 - tumor necrosis factor receptor superfamily, member 1B [Source:ZFIN;Acc:ZDB-GENE-070410-133]
29. ap1s1 ENSDARG00000056803 3854 0.93 - - - - - - - 0.930 - adaptor related protein complex 1 subunit sigma 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1119]
30. lmo4b ENSDARG00000054749, ENSDARG00000115402 1397 0.916 - - - - - - - 0.916 - LIM domain only 4b [Source:ZFIN;Acc:ZDB-GENE-030131-3570]
31. si:dkey-30k6.5 ENSDARG00000057238 617 0.906 - - - - - - - 0.906 - si:dkey-30k6.5 [Source:ZFIN;Acc:ZDB-GENE-091204-299]
32. pdzd4 175 0.903 - - - - - - - 0.903 - PDZ domain containing 4, transcript variant X2
33. uvrag ENSDARG00000023815 424 0.903 - - - - - - - 0.903 - UV radiation resistance associated gene [Source:ZFIN;Acc:ZDB-GENE-040426-924]
34. CR388231.3 ENSDARG00000105601 2404 0.897 - - - - - - - 0.897 -
35. FAM171A2 FAM171A2 707 0.891 - - - - - - - 0.891 -
36. epn1 ENSDARG00000010411 725 0.889 - - - - - - - 0.889 - epsin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2680]
37. gcfc2 ENSDARG00000079020 479 0.888 - - - - - - - 0.888 - GC-rich sequence DNA-binding factor 2 [Source:ZFIN;Acc:ZDB-GENE-080204-19]
38. qdpra ENSDARG00000040190 4064 0.888 - - - - - - - 0.888 - quinoid dihydropteridine reductase a [Source:ZFIN;Acc:ZDB-GENE-070705-197]
39. CELA1_1 CELA1_1 104 0.887 0.887 - - - - - - - -
40. tmem30aa ENSDARG00000030236 2842 0.887 - - - - - - - 0.887 - transmembrane protein 30Aa [Source:ZFIN;Acc:ZDB-GENE-040704-26]
41. dvl2 ENSDARG00000056184 1525 0.883 - - - - - - - 0.883 - dishevelled segment polarity protein 2 [Source:ZFIN;Acc:ZDB-GENE-041118-20]
42. ATP13A3 ENSDARG00000076622 1000 0.881 - - - - - - - 0.881 - ATPase 13A3 [Source:ZFIN;Acc:ZDB-GENE-120521-1]
43. TP53I3 60 0.878 0.878 - - - - - - - - tumor protein p53 inducible protein 3, transcript variant X1
44. st6galnac1.2 ENSDARG00000043816 51 0.878 - - - - - - - 0.878 - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-041014-161]
45. gltscr1l gltscr1l 782 0.878 - 0.878 - - - - - - -
46. adcy1b ENSDARG00000088634 44 0.878 - - - - - - - 0.878 - adenylate cyclase 1b [Source:ZFIN;Acc:ZDB-GENE-100805-1]
47. lrit2 ENSDARG00000030626 69 0.878 - - - - - - - 0.878 - leucine-rich repeat, immunoglobulin-like and transmembrane domains 2 [Source:ZFIN;Acc:ZDB-GENE-050522-160]
48. rgs9bp ENSDARG00000009466 41 0.877 - - - - - - - 0.877 - regulator of G protein signaling 9 binding protein [Source:ZFIN;Acc:ZDB-GENE-030728-1]
49. GRIK3 ENSDARG00000077715 178 0.877 - - - - - - - 0.877 - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
50. CABZ01027547.1 CABZ01027547.1 128 0.877 - - - - - - - 0.877 -
51. CR942805.1 CR942805.1 94 0.876 - - - - - - - 0.876 -
52. gpr84 ENSDARG00000077308, ENSDARG00000111475 93 0.876 - - - - - - - 0.876 - G protein-coupled receptor 84 [Source:ZFIN;Acc:ZDB-GENE-070928-33]
53. gnat2 ENSDARG00000042529 112 0.876 - - - - - - - 0.876 - guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-011128-10]
54. cabp2b ENSDARG00000052277 119 0.876 - - - - - - - 0.876 - calcium binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-081028-55]
55. gtf3c2 ENSDARG00000004574 153 0.876 - - - - - - - 0.876 - general transcription factor IIIC, polypeptide 2, beta [Source:ZFIN;Acc:ZDB-GENE-041014-349]
56. ZNF337_21 ZNF337_21 53 0.876 - - - - - - - 0.876 -
57. si:ch211-57i17.2 ENSDARG00000093354 58 0.876 - - - - - - - 0.876 - si:ch211-57i17.2 [Source:ZFIN;Acc:ZDB-GENE-041014-258]
58. il21r il21r 74 0.875 - - - - - - - 0.875 -
59. ENSDARG00000089986 ENSDARG00000089986 308 0.875 - - - - - - - 0.875 -
60. si:dkey-15h14.4 si:dkey-15h14.4 118 0.875 - - - - - - - 0.875 -
61. med27 ENSDARG00000009681 1857 0.875 - - - - - - - 0.875 - mediator complex subunit 27 [Source:ZFIN;Acc:ZDB-GENE-040426-1601]
62. zdhhc3 zdhhc3 152 0.875 - - - - - - - 0.875 -
63. syt5b ENSDARG00000011640 70 0.875 - - - - - - - 0.875 - synaptotagmin Vb [Source:ZFIN;Acc:ZDB-GENE-050522-134]
64. CU181898.3 CU181898.3 440 0.873 - - - - - - - 0.873 -
65. gucy1b3 92 0.873 - - - - - - - 0.873 - guanylate cyclase 1, soluble, beta 3
66. lingo4b ENSDARG00000078527 235 0.872 - - - - - - - 0.872 - leucine rich repeat and Ig domain containing 4b [Source:ZFIN;Acc:ZDB-GENE-091214-3]
67. CABZ01066957.1 CABZ01066957.1 161 0.872 - - - - - - - 0.872 -
68. slc35b1_1 ENSDARG00000038213 194 0.872 - - - - - - - 0.872 - solute carrier family 35, member B1 [Source:ZFIN;Acc:ZDB-GENE-040912-148]
69. draxin ENSDARG00000058256, ENSDARG00000111676 266 0.872 - - - - - - - 0.872 - dorsal inhibitory axon guidance protein [Source:ZFIN;Acc:ZDB-GENE-050913-20]
70. inaa ENSDARG00000011862 115 0.872 - - - - - - - 0.872 - internexin neuronal intermediate filament protein, alpha a [Source:ZFIN;Acc:ZDB-GENE-060531-65]
71. fdx1b ENSDARG00000038956, ENSDARG00000113144 66 0.872 - - - - - - - 0.872 - ferredoxin 1b [Source:ZFIN;Acc:ZDB-GENE-060526-382]
72. cplx4c ENSDARG00000094889 253 0.872 - - - - - - - 0.872 - complexin 4c [Source:ZFIN;Acc:ZDB-GENE-101018-1]
73. exd3 ENSDARG00000063140 119 0.872 - - - - - - - 0.872 - exonuclease 3'-5' domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-091204-349]
74. edem2 ENSDARG00000028448 236 0.871 - - - - - - 0.871 - - ER degradation enhancer, mannosidase alpha-like 2 [Source:ZFIN;Acc:ZDB-GENE-060519-1]
75. NFKBIB ENSDARG00000030087, ENSDARG00000109444 306 0.871 - - - - - - - 0.871 - nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta [Source:ZFIN;Acc:ZDB-GENE-070705-529]
76. fabp7b ENSDARG00000034650 397 0.871 - - - - - - - 0.871 - fatty acid binding protein 7, brain, b [Source:ZFIN;Acc:ZDB-GENE-040614-4]
77. wnt8b ENSDARG00000006911 98 0.871 - - - - - - - 0.871 - wingless-type MMTV integration site family, member 8b [Source:ZFIN;Acc:ZDB-GENE-990415-279]
78. zgc:112001 ENSDARG00000078034 93 0.871 - - - - - - - 0.871 - zgc:112001 [Source:ZFIN;Acc:ZDB-GENE-050417-178]
79. CACFD1 ENSDARG00000090818 1298 0.87 - - - - - - - 0.870 - calcium channel flower domain containing 1 [Source:HGNC Symbol;Acc:HGNC:1365]
80. lnx2b ENSDARG00000071478 654 0.87 - - - - - - - 0.870 - ligand of numb-protein X 2b [Source:ZFIN;Acc:ZDB-GENE-040426-2500]
81. sec22c ENSDARG00000063387 203 0.87 - - - - - - - 0.870 - SEC22 homolog C, vesicle trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060227-2]
82. scrn2 ENSDARG00000043497 204 0.87 - - - - - - - 0.870 - secernin 2 [Source:ZFIN;Acc:ZDB-GENE-040724-75]
83. si:dkey-13a21.4 ENSDARG00000026098, ENSDARG00000113692 87 0.87 - - - - - - - 0.870 - si:dkey-13a21.4 [Source:ZFIN;Acc:ZDB-GENE-040724-163]
84. si:dkey-170k13.3 si:dkey-170k13.3 397 0.869 - - - - - - - 0.869 -
85. saal1 ENSDARG00000018681, ENSDARG00000109471 480 0.869 - - - - - - - 0.869 - serum amyloid A-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-725]
86. bag5 ENSDARG00000017316 195 0.869 - - - - - - - 0.869 - BCL2 associated athanogene 5 [Source:ZFIN;Acc:ZDB-GENE-050913-58]
87. gtf3c3 ENSDARG00000043247 202 0.869 - - - - - - - 0.869 - general transcription factor IIIC, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-040914-80]
88. FBXO48 ENSDARG00000086184 110 0.869 - - - - - - - 0.869 - F-box protein 48 [Source:HGNC Symbol;Acc:HGNC:33857]
89. vhl ENSDARG00000070617 663 0.869 - - - - - - - 0.869 - von Hippel-Lindau tumor suppressor [Source:ZFIN;Acc:ZDB-GENE-070112-1042]
90. glipr1b ENSDARG00000030078 73 0.868 - - - - - - - 0.868 - GLI pathogenesis-related 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1459]
91. fam86a fam86a 174 0.868 - - - - - - - 0.868 -
92. WIZ WIZ 1188 0.868 - - - - - - - 0.868 -
93. ftr29 ENSDARG00000075355 172 0.868 - - - - - - - 0.868 - finTRIM family, member 29 [Source:ZFIN;Acc:ZDB-GENE-050417-159]
94. tmem145 ENSDARG00000088342 183 0.867 - - - - - - - 0.867 - transmembrane protein 145 [Source:ZFIN;Acc:ZDB-GENE-110411-84]
95. BX000999.4_1 BX000999.4_1 222 0.867 - - - - - - - 0.867 -
96. dnase2 ENSDARG00000073893 141 0.867 - - - - - - - 0.867 - deoxyribonuclease II, lysosomal [Source:ZFIN;Acc:ZDB-GENE-010724-16]
97. zmiz1b ENSDARG00000102279 26 0.867 - - - - - - 0.867 - - zinc finger, MIZ-type containing 1b [Source:ZFIN;Acc:ZDB-GENE-120206-3]
98. siae ENSDARG00000040527, ENSDARG00000111850 186 0.867 - - - - - - - 0.867 - sialic acid acetylesterase [Source:ZFIN;Acc:ZDB-GENE-040426-1032]
99. CLNK 8 0.867 - 0.867 - - - - - - - cytokine dependent hematopoietic cell linker
100. si:dkey-4e7.3 ENSDARG00000042124 319 0.866 - 0.866 - - - - - - - si:dkey-4e7.3 [Source:ZFIN;Acc:ZDB-GENE-070912-542]

There are 755 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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