Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for setx

Gene Name Gene ID Reads Annotation
setx ENSDARG00000022996 385 senataxin [Source:ZFIN;Acc:ZDB-GENE-070402-1]










Genes with expression patterns similar to setx

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. setx ENSDARG00000022996 385 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 senataxin [Source:ZFIN;Acc:ZDB-GENE-070402-1]
2. si:dkey-14k9.3 ENSDARG00000045595 256 1.783 - - - 0.887 - - - 0.896 - si:dkey-14k9.3 [Source:ZFIN;Acc:ZDB-GENE-030131-2893]
3. CIT CIT 212 1.722 - - - - - 0.771 - 0.951 -
4. CR381544.1 ENSDARG00000088187 821 1.687 - - - 0.734 - - - 0.953 -
5. ITFG3 ITFG3 1803 1.681 - - - 0.836 - - - 0.845 -
6. fgf12a ENSDARG00000027957 143 1.639 0.707 - - - - - - 0.932 - fibroblast growth factor 12a [Source:ZFIN;Acc:ZDB-GENE-050221-6]
7. ddx56 ENSDARG00000020913 1070 1.632 - - - 0.721 - - - 0.911 - DEAD (Asp-Glu-Ala-Asp) box helicase 56 [Source:ZFIN;Acc:ZDB-GENE-040825-3]
8. qrsl1 ENSDARG00000032704 200 1.628 - - - 0.824 - 0.804 - - - glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5540]
9. zdhhc14 ENSDARG00000037069 479 1.617 - - - - - - 0.716 0.901 - zinc finger, DHHC-type containing 14 [Source:ZFIN;Acc:ZDB-GENE-040724-21]
10. scn8ab ENSDARG00000018032, ENSDARG00000112543 883 1.615 - - - 0.821 - - - 0.794 - sodium channel, voltage gated, type VIII, alpha subunit b [Source:ZFIN;Acc:ZDB-GENE-060906-2]
11. rdh12l ENSDARG00000045277 139 1.603 - - - 0.886 - - - 0.717 - retinol dehydrogenase 12, like [Source:ZFIN;Acc:ZDB-GENE-040801-48]
12. itpkca ENSDARG00000002994 710 1.577 - 0.739 - - - - - 0.838 - inositol-trisphosphate 3-kinase Ca [Source:ZFIN;Acc:ZDB-GENE-030131-6009]
13. ak4 ENSDARG00000006546 1528 1.573 - - - 0.705 - - - 0.868 - adenylate kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2505]
14. pcgf1 ENSDARG00000001249 409 1.571 - - - 0.852 - - 0.719 - - polycomb group ring finger 1 [Source:ZFIN;Acc:ZDB-GENE-030616-605]
15. IRS2 IRS2 485 1.564 - - - 0.824 - 0.740 - - -
16. ZBTB7B ENSDARG00000021891 843 1.534 - - - 0.743 - - - 0.791 - zinc finger and BTB domain containing 7B [Source:ZFIN;Acc:ZDB-GENE-040426-1134]
17. stk40 ENSDARG00000098135 2683 1.521 - - - 0.768 - - - 0.753 - serine/threonine kinase 40 [Source:ZFIN;Acc:ZDB-GENE-030131-4831]
18. snai1b ENSDARG00000046019 886 1.481 - - - 0.738 - - - 0.743 - snail family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-980526-514]
19. riok2 ENSDARG00000035264, ENSDARG00000116349 613 1.474 - 0.705 - - - - - 0.769 - RIO kinase 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2913]
20. ubald1a_1 ENSDARG00000002362 401 1.424 0.715 - - 0.709 - - - - - UBA-like domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-040718-191]
21. cyp4v8 ENSDARG00000062132, ENSDARG00000111608 92 0.97 - - - - - - - 0.970 - cytochrome P450, family 4, subfamily V, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-061103-601]
22. hoxa4a 37 0.965 - - - - - - - 0.965 - homeobox A4a, transcript variant X4
23. chrna3 ENSDARG00000100991, ENSDARG00000116434 63 0.963 - - - - - - - 0.963 - cholinergic receptor, nicotinic, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-070822-1]
24. pnn ENSDARG00000015851 1269 0.961 - - - - - - - 0.961 - pinin, desmosome associated protein [Source:ZFIN;Acc:ZDB-GENE-060519-3]
25. TTF1_4 TTF1_4 504 0.961 - - - - - - - 0.961 -
26. GDPD4_1 GDPD4_1 190 0.958 - - - - - - - 0.958 -
27. adora1 adora1 149 0.958 - - - - - - - 0.958 -
28. spef2 ENSDARG00000098330 59 0.958 - - - - - - - 0.958 - sperm flagellar 2 [Source:ZFIN;Acc:ZDB-GENE-060526-47]
29. jam3a ENSDARG00000114589 630 0.958 - - - - - - - 0.958 - junctional adhesion molecule 3a [Source:ZFIN;Acc:ZDB-GENE-070424-177]
30. pex5la ENSDARG00000022518, ENSDARG00000109971, ENSDARG00000110029, ENSDARG00000112628 28 0.957 - - - - - - - 0.957 - peroxisomal biogenesis factor 5-like a [Source:ZFIN;Acc:ZDB-GENE-070705-298]
31. pde6b ENSDARG00000011671 44 0.957 - - - - - - - 0.957 - phosphodiesterase 6B, cGMP-specific, rod, beta [Source:ZFIN;Acc:ZDB-GENE-090421-2]
32. ALPK1 195 0.957 - - - - - - - 0.957 - alpha-kinase 1
33. adcyap1a ENSDARG00000004015 67 0.957 - - - - - - - 0.957 - adenylate cyclase activating polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-020809-4]
34. IKZF4 ENSDARG00000037068 36 0.957 - - - - - - - 0.957 - IKAROS family zinc finger 4 [Source:ZFIN;Acc:ZDB-GENE-180319-1]
35. si:dkey-100h21.2 si:dkey-100h21.2 30 0.957 - - - - - - - 0.957 -
36. ankdd1b ENSDARG00000025866 51 0.957 - - - - - - - 0.957 - ankyrin repeat and death domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-060526-136]
37. mir130b 180 0.957 - - - - - - - 0.957 - microRNA 130b
38. si:ch73-167f18.3 si:ch73-167f18.3 78 0.957 - - - - - - - 0.957 -
39. pus7 ENSDARG00000031774 195 0.956 - - - - - - - 0.956 - pseudouridylate synthase 7 [Source:ZFIN;Acc:ZDB-GENE-060620-1]
40. rpgra ENSDARG00000056617 77 0.956 - - - - - - - 0.956 - retinitis pigmentosa GTPase regulator a [Source:ZFIN;Acc:ZDB-GENE-070912-423]
41. si:dkey-157e10.7 si:dkey-157e10.7 105 0.955 - - - - - - - 0.955 -
42. si:dkey-8k3.2 ENSDARG00000038424 285 0.955 - - - - - - - 0.955 - si:dkey-8k3.2 [Source:ZFIN;Acc:ZDB-GENE-100922-98]
43. VDAC3 ENSDARG00000003695 34 0.955 - - - - - - - 0.955 - voltage-dependent anion channel 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2380]
44. MAP7 MAP7 98 0.955 - - - - - - - 0.955 -
45. pard3 pard3 161 0.955 - - - - - - - 0.955 -
46. pars2 ENSDARG00000044404, ENSDARG00000109425 271 0.954 - - - - - - - 0.954 - prolyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-4219]
47. POLQ ENSDARG00000044622, ENSDARG00000110374 94 0.954 - - - - - - - 0.954 - polymerase (DNA directed), theta [Source:ZFIN;Acc:ZDB-GENE-040724-232]
48. timm10 ENSDARG00000069116 4459 0.954 - - - - - - - 0.954 - translocase of inner mitochondrial membrane 10 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-427]
49. b3galtla b3galtla 111 0.953 - - - - - - - 0.953 -
50. mea1 ENSDARG00000039820 589 0.953 - - - - - - - 0.953 - male-enhanced antigen 1 [Source:ZFIN;Acc:ZDB-GENE-070424-117]
51. KBTBD13_1 KBTBD13_1 116 0.952 - - - - - - - 0.952 -
52. nrxn2b ENSDARG00000063150 343 0.952 - - - - - - - 0.952 - neurexin 2b [Source:ZFIN;Acc:ZDB-GENE-070206-7]
53. zgc:174877 ENSDARG00000079278 143 0.951 - - - - - - - 0.951 - zgc:174877 [Source:ZFIN;Acc:ZDB-GENE-041008-66]
54. TFPT ENSDARG00000089572, ENSDARG00000111694 112 0.951 - - - - - - - 0.951 - TCF3 (E2A) fusion partner [Source:ZFIN;Acc:ZDB-GENE-140106-241]
55. ly75 ENSDARG00000053113 196 0.951 - - - - - - - 0.951 - lymphocyte antigen 75 [Source:ZFIN;Acc:ZDB-GENE-050309-166]
56. prkag3b ENSDARG00000000369 1945 0.95 - - - - - - - 0.950 - protein kinase, AMP-activated, gamma 3b non-catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-060421-6938]
57. zgc:174688 zgc:174688 170 0.95 - - - - - - - 0.950 -
58. tarsl2 ENSDARG00000092774 505 0.95 - - - - - - - 0.950 - threonyl-tRNA synthetase-like 2 [Source:ZFIN;Acc:ZDB-GENE-081104-490]
59. si:dkey-17e6.2 si:dkey-17e6.2 72 0.948 - - - - - - - 0.948 -
60. usp4 ENSDARG00000014770 1684 0.948 - - - - - - - 0.948 - ubiquitin specific peptidase 4 (proto-oncogene) [Source:ZFIN;Acc:ZDB-GENE-041008-187]
61. enosf1 ENSDARG00000038359 209 0.947 - - - - - - - 0.947 - enolase superfamily member 1 [Source:ZFIN;Acc:ZDB-GENE-060929-780]
62. BX005410.2 BX005410.2 44 0.947 - - - - - - - 0.947 -
63. hn1a hn1a 115 0.947 - - - - - - - 0.947 -
64. si:ch211-283g2.2 ENSDARG00000108340, ENSDARG00000108953 59 0.946 - - - - - - - 0.946 - si:ch211-283g2.2 [Source:ZFIN;Acc:ZDB-GENE-060526-151]
65. SHANK1 ENSDARG00000060539 102 0.946 - - - - - - - 0.946 - SH3 and multiple ankyrin repeat domains 1 [Source:ZFIN;Acc:ZDB-GENE-130530-691]
66. rwdd2b ENSDARG00000055426 294 0.945 - - - - - - - 0.945 - RWD domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-041001-119]
67. smarcd2 ENSDARG00000088877 416 0.944 - - - - - - - 0.944 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 [Source:ZFIN;Acc:ZDB-GENE-080215-1]
68. CABZ01045230.1 CABZ01045230.1 158 0.943 - - - - - - - 0.943 -
69. slc6a6a ENSDARG00000012534 183 0.943 - - - - - - - 0.943 - solute carrier family 6 (neurotransmitter transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-081104-1]
70. aatkb ENSDARG00000104442 392 0.941 - - - - - - - 0.941 - apoptosis-associated tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-100812-6]
71. ncoa6 ENSDARG00000071272 759 0.941 - - - - - - - 0.941 - nuclear receptor coactivator 6 [Source:ZFIN;Acc:ZDB-GENE-080403-12]
72. commd1 ENSDARG00000031203 340 0.94 - - - - - - - 0.940 - copper metabolism (Murr1) domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060512-329]
73. camk2d1 ENSDARG00000043010 669 0.94 - - - - - - - 0.940 - calcium/calmodulin-dependent protein kinase (CaM kinase) II delta 1 [Source:ZFIN;Acc:ZDB-GENE-040801-121]
74. nrp2b ENSDARG00000038446 783 0.939 - - - - - - - 0.939 - neuropilin 2b [Source:ZFIN;Acc:ZDB-GENE-040611-3]
75. si:dkey-169l5.3 si:dkey-169l5.3 239 0.939 - - - - - - - 0.939 -
76. BX511021.1 ENSDARG00000073936 647 0.939 - - - - - - - 0.939 - ferritin, middle subunit-like [Source:NCBI gene;Acc:100006428]
77. p2rx3b ENSDARG00000029718 105 0.937 - - - - - - - 0.937 - purinergic receptor P2X, ligand-gated ion channel, 3b [Source:ZFIN;Acc:ZDB-GENE-030319-3]
78. si:dkey-253d23.2 ENSDARG00000071589 143 0.936 - - - - - - - 0.936 - si:dkey-253d23.2 [Source:ZFIN;Acc:ZDB-GENE-050208-410]
79. dclk1a ENSDARG00000018856 177 0.935 - - - - - - - 0.935 - doublecortin-like kinase 1a [Source:ZFIN;Acc:ZDB-GENE-061013-124]
80. reep1 ENSDARG00000014854 915 0.935 - - - - - - - 0.935 - receptor accessory protein 1 [Source:ZFIN;Acc:ZDB-GENE-110411-267]
81. ANGPT4 ENSDARG00000076787 140 0.935 - - - - - - - 0.935 - angiopoietin 4 [Source:ZFIN;Acc:ZDB-GENE-110104-1]
82. CABZ01080599.2 CABZ01080599.2 192 0.934 - - - - - - - 0.934 -
83. pdxka ENSDARG00000088959 217 0.934 - - - - - - - 0.934 - pyridoxal (pyridoxine, vitamin B6) kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-8376]
84. git2a ENSDARG00000061915 884 0.933 - - - - - - - 0.933 - G protein-coupled receptor kinase interacting ArfGAP 2a [Source:ZFIN;Acc:ZDB-GENE-060526-267]
85. nrg2a ENSDARG00000077818 854 0.932 - - - - - - - 0.932 - neuregulin 2a [Source:ZFIN;Acc:ZDB-GENE-070615-10]
86. cplx4b ENSDARG00000059486 3192 0.93 - - - 0.930 - - - - - complexin 4b [Source:ZFIN;Acc:ZDB-GENE-070705-157]
87. tiprl ENSDARG00000032353 1045 0.929 - - - - - - - 0.929 - TIP41, TOR signaling pathway regulator-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1611]
88. zgc:122979 ENSDARG00000004187 61 0.929 - - - - - - - 0.929 - zgc:122979 [Source:ZFIN;Acc:ZDB-GENE-051127-45]
89. LMOD3 ENSDARG00000062662, ENSDARG00000115769 456 0.928 - - - - - - - 0.928 - leiomodin 3 (fetal) [Source:ZFIN;Acc:ZDB-GENE-090313-353]
90. ypel2b ENSDARG00000087258, ENSDARG00000116766 539 0.927 - - - - - - - 0.927 - yippee-like 2b [Source:ZFIN;Acc:ZDB-GENE-110419-2]
91. pemt ENSDARG00000103614 474 0.927 - - - - - - - 0.927 - phosphatidylethanolamine N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-040426-719]
92. bola1 ENSDARG00000039915 658 0.927 - - - - - - - 0.927 - bolA family member 1 [Source:ZFIN;Acc:ZDB-GENE-040801-76]
93. NHSL2 ENSDARG00000089066 374 0.926 - - - - - - - 0.926 - NHS-like 2 [Source:ZFIN;Acc:ZDB-GENE-130530-951]
94. CR790363.1 ENSDARG00000097364 145 0.926 - - - - - - - 0.926 -
95. zgc:162948 ENSDARG00000053695 301 0.926 - - - - - - - 0.926 - zgc:162948 [Source:ZFIN;Acc:ZDB-GENE-070424-46]
96. tmem161b ENSDARG00000055989 680 0.926 - - - - - - - 0.926 - transmembrane protein 161B [Source:ZFIN;Acc:ZDB-GENE-040426-2693]
97. HYKK HYKK 261 0.926 - - - - - - - 0.926 -
98. C20H1orf112 C20H1orf112 316 0.925 - - - - - - - 0.925 -
99. TCAIM ENSDARG00000079881 424 0.923 - - - - - - - 0.923 - T cell activation inhibitor, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-160113-67]
100. ZNF70_11 ZNF70_11 1246 0.921 - - - - - - - 0.921 -

There are 758 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA