Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for scn1a

Gene Name Gene ID Reads Annotation
scn1a 8 sodium channel, voltage-gated, type I, alpha, transcript variant X1










Genes with expression patterns similar to scn1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. scn1a 8 7 1.000 1.000 1.000 - 1.000 1.000 - 1.000 1.000 sodium channel, voltage-gated, type I, alpha, transcript variant X1
2. slc18a2 ENSDARG00000015110, ENSDARG00000115207 6 2.705 - - - - - 1.000 - 0.705 1.000 solute carrier family 18 (vesicular monoamine transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-080514-1]
3. CNTNAP3 ENSDARG00000067824 25 2.694 0.713 1.000 - - 0.981 - - - - contactin associated protein like 3 [Source:ZFIN;Acc:ZDB-GENE-091113-51]
4. dph2 ENSDARG00000078077 36 2.458 0.838 0.736 - - 0.884 - - - - DPH2 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030219-100]
5. zgc:110789 ENSDARG00000052497, ENSDARG00000111073 171 2 1.000 1.000 - - - - - - - zgc:110789 [Source:ZFIN;Acc:ZDB-GENE-050306-38]
6. si:dkey-188i13.8 ENSDARG00000092725 1 2 - - - - - 1.000 - - 1.000 si:dkey-188i13.8 [Source:ZFIN;Acc:ZDB-GENE-090312-93]
7. si:dkey-4j21.1 17 2 - - - - - 1.000 - - 1.000 si:dkey-4j21.1, transcript variant X2
8. CABZ01056274.1 CABZ01056274.1 3 2 - 1.000 - - - - - - 1.000
9. si:dkey-65b12.13 si:dkey-65b12.13 7 2 - 1.000 - - - 1.000 - - -
10. si:ch211-132b12.7 ENSDARG00000068374 30 2 1.000 - - - - 1.000 - - - si:ch211-132b12.7 [Source:ZFIN;Acc:ZDB-GENE-050419-250]
11. si:dkey-51d8.6 ENSDARG00000090769 17 2 1.000 1.000 - - - - - - - si:dkey-51d8.6 [Source:ZFIN;Acc:ZDB-GENE-110914-115]
12. pwwp2b ENSDARG00000101080 138 2 - 1.000 - - - 1.000 - - - PWWP domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-110930-2]
13. si:dkey-93m18.5 si:dkey-93m18.5 2 2 - - - - - 1.000 - - 1.000
14. BX000999.2 BX000999.2 2353 2 1.000 1.000 - - - - - - -
15. DSEL DSEL 1 2 1.000 - - - - - - - 1.000
16. c6ast1 ENSDARG00000069216 8 2 1.000 - - - - 1.000 - - - six-cysteine containing astacin protease 1 [Source:ZFIN;Acc:ZDB-GENE-070621-1]
17. si:ch211-113a14.19_1 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 15 2 - 1.000 - - - - - - 1.000 si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
18. BX321870.1 ENSDARG00000098519 9 2 - - - - - 1.000 - - 1.000
19. CU861664.1 CU861664.1 53 2 - 1.000 - - - 1.000 - - -
20. LOXL2 LOXL2 2 2 - 1.000 - - - 1.000 - - -
21. si:dkey-98f17.5 ENSDARG00000068863, ENSDARG00000116489 7 2 - 1.000 - - - - - - 1.000 si:dkey-98f17.5 [Source:ZFIN;Acc:ZDB-GENE-060526-354]
22. KCNN2 ENSDARG00000014939 25 1.983 0.983 1.000 - - - - - - - potassium calcium-activated channel subfamily N member 2 [Source:HGNC Symbol;Acc:HGNC:6291]
23. lonrf1 ENSDARG00000075048 13 1.972 - 1.000 - - 0.972 - - - - LON peptidase N-terminal domain and ring finger 1 [Source:ZFIN;Acc:ZDB-GENE-101021-4]
24. CU672227.1 ENSDARG00000105807 15 1.954 1.000 - - - 0.954 - - - -
25. ggcta ENSDARG00000076406 33 1.893 - - 0.893 - - 1.000 - - - gamma-glutamylcyclotransferase a [Source:ZFIN;Acc:ZDB-GENE-081104-129]
26. fbxo43 ENSDARG00000104186 40 1.889 1.000 0.889 - - - - - - - F-box protein 43 [Source:ZFIN;Acc:ZDB-GENE-040426-1645]
27. c1ql3a ENSDARG00000010350 179 1.875 - - - - 0.875 1.000 - - - complement component 1, q subcomponent-like 3a [Source:ZFIN;Acc:ZDB-GENE-080417-1]
28. ENSDARG00000092910 ENSDARG00000092910 44 1.871 0.871 1.000 - - - - - - -
29. org ENSDARG00000076474 16 1.87 - - - - 0.870 - - - 1.000 oogenesis-related gene [Source:ZFIN;Acc:ZDB-GENE-050208-584]
30. impact ENSDARG00000043288 7 1.861 - - 0.861 - - 1.000 - - - impact RWD domain protein [Source:ZFIN;Acc:ZDB-GENE-040927-10]
31. HIST1H2BA ENSDARG00000116654 10 1.854 1.000 - 0.854 - - - - - - histone cluster 1 H2B family member a [Source:HGNC Symbol;Acc:HGNC:18730]
32. si:dkey-23a23.2 ENSDARG00000023036 123 1.815 0.916 0.899 - - - - - - - si:dkey-23a23.2 [Source:ZFIN;Acc:ZDB-GENE-060503-158]
33. FJX1 ENSDARG00000035873 22 1.811 - - 0.811 - - - - - 1.000 four jointed box 1 [Source:ZFIN;Acc:ZDB-GENE-100422-10]
34. usp47 ENSDARG00000102645 16 1.799 1.000 0.799 - - - - - - - ubiquitin specific peptidase 47 [Source:ZFIN;Acc:ZDB-GENE-070719-7]
35. tmem168b ENSDARG00000062168 17 1.797 - - - - - 1.000 - - 0.797 transmembrane protein 168b [Source:ZFIN;Acc:ZDB-GENE-090406-3]
36. si:dkey-117n7.2 ENSDARG00000093135 40 1.796 - - - - 0.796 1.000 - - - si:dkey-117n7.2 [Source:ZFIN;Acc:ZDB-GENE-060503-49]
37. SNORA81_1 SNORA81_1 8 1.794 - - 0.794 - - 1.000 - - -
38. si:dkey-122c11.4 si:dkey-122c11.4 13 1.761 1.000 - - - - - - - 0.761
39. CU367845.1 CU367845.1 215 1.756 0.756 1.000 - - - - - - -
40. mamdc2b ENSDARG00000073695 26 1.749 1.000 - - - - - - - 0.749 MAM domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-091117-16]
41. SLX1A SLX1A 15 1.742 - 1.000 - - - 0.742 - - -
42. omga ENSDARG00000086573 3 1.742 - 1.000 - - - 0.742 - - - oligodendrocyte myelin glycoprotein a [Source:ZFIN;Acc:ZDB-GENE-091204-203]
43. ccdc127a 39 1.741 0.741 - - - - 1.000 - - - coiled-coil domain containing 127a, transcript variant X2
44. klhl5 ENSDARG00000062122, ENSDARG00000114563, ENSDARG00000115909 27 1.741 0.741 1.000 - - - - - - - kelch-like family member 5 [Source:ZFIN;Acc:ZDB-GENE-080424-7]
45. mapk8a ENSDARG00000031888 44 1.735 0.842 0.893 - - - - - - - mitogen-activated protein kinase 8a [Source:ZFIN;Acc:ZDB-GENE-080218-17]
46. DLGAP2 DLGAP2 36 1.723 0.723 1.000 - - - - - - -
47. LIX1 ENSDARG00000052154 9 1.723 0.723 - - - - - - - 1.000 limb and CNS expressed 1 [Source:ZFIN;Acc:ZDB-GENE-060526-123]
48. gata2b ENSDARG00000009094 16 1.71 - - - - - 1.000 - 0.710 - GATA binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-040718-440]
49. MYCT1 MYCT1 64 1.707 - 1.000 - - - 0.707 - - -
50. si:ch211-222k6.1 20 1.687 - 0.714 - - 0.973 - - - - si:ch211-222k6.1, transcript variant X6
51. hpse ENSDARG00000063634, ENSDARG00000112827 35 1.686 0.823 - 0.863 - - - - - - heparanase [Source:ZFIN;Acc:ZDB-GENE-041111-200]
52. rsph4a ENSDARG00000067606 132 1.631 - 0.889 - - - 0.742 - - - radial spoke head component 4A [Source:ZFIN;Acc:ZDB-GENE-030131-7437]
53. C1S_1 C1S_1 11 1.575 - 0.714 0.861 - - - - - -
54. atad5b ENSDARG00000101126, ENSDARG00000111647, ENSDARG00000116936 16 1.544 - 0.705 - - - - - 0.839 - ATPase family, AAA domain containing 5b [Source:ZFIN;Acc:ZDB-GENE-030131-338]
55. stim1b ENSDARG00000061560 146 1.485 0.760 - - - 0.725 - - - - stromal interaction molecule 1b [Source:ZFIN;Acc:ZDB-GENE-060531-4]
56. nr4a2a ENSDARG00000017007 140 1.437 0.723 0.714 - - - - - - - nuclear receptor subfamily 4, group A, member 2a [Source:ZFIN;Acc:ZDB-GENE-990415-184]
57. TRIM35 TRIM35 100 1 - 1.000 - - - - - - -
58. htra1b ENSDARG00000014907 146 1 1.000 - - - - - - - - HtrA serine peptidase 1b [Source:ZFIN;Acc:ZDB-GENE-080219-7]
59. cdc14aa ENSDARG00000013858 18 1 - - - - - - - - 1.000 cell division cycle 14Aa [Source:ZFIN;Acc:ZDB-GENE-040426-1214]
60. BX927130.1 ENSDARG00000099328 7 1 - - - - - - - - 1.000 si:dkey-27n6.5 [Source:NCBI gene;Acc:557869]
61. or111-2 ENSDARG00000025658 2 1 - - - - - 1.000 - - - odorant receptor, family D, subfamily 111, member 2 [Source:ZFIN;Acc:ZDB-GENE-010308-19]
62. c6ast4 ENSDARG00000052578 6 1 1.000 - - - - - - - - six-cysteine containing astacin protease 4 [Source:ZFIN;Acc:ZDB-GENE-050626-100]
63. myh11a ENSDARG00000009782 80 1 - 1.000 - - - - - - - myosin, heavy chain 11a, smooth muscle [Source:ZFIN;Acc:ZDB-GENE-050531-1]
64. htr5al htr5al 6 1 - - - - - - - - 1.000
65. si:ch1073-109g21.1 si:ch1073-109g21.1 0 1 - - - - - - - - 1.000
66. MCOLN2 ENSDARG00000098918 12 1 - 1.000 - - - - - - - mucolipin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-692]
67. psme2 ENSDARG00000033144 3 1 - - - - - 1.000 - - - proteasome activator subunit 2 [Source:ZFIN;Acc:ZDB-GENE-991110-16]
68. c1ql3b_1 ENSDARG00000028521, ENSDARG00000036483 16 1 - - - - - 1.000 - - - complement component 1, q subcomponent-like 3b [Source:ZFIN;Acc:ZDB-GENE-040426-1836]
69. ZBTB32 ENSDARG00000073726 1 1 - - - - - 1.000 - - - zinc finger and BTB domain containing 32 [Source:ZFIN;Acc:ZDB-GENE-131121-166]
70. C6H1orf74 C6H1orf74 53 1 - - - - - 1.000 - - -
71. SLC41A2_1 SLC41A2_1 69 1 - 1.000 - - - - - - -
72. si:dkey-182i3.11 ENSDARG00000069270 3 1 - - - - - 1.000 - - - si:dkey-182i3.11 [Source:ZFIN;Acc:ZDB-GENE-121214-258]
73. si:dkey-32n7.4 ENSDARG00000002956 3 1 - - - - - 1.000 - - - si:dkey-32n7.4 [Source:ZFIN;Acc:ZDB-GENE-110411-175]
74. MEI1 MEI1 2 1 - - - - - - - - 1.000
75. CR450785.2 ENSDARG00000111875 1 1 1.000 - - - - - - - -
76. si:ch211-10p21.1 si:ch211-10p21.1 6 1 - - - - - 1.000 - - -
77. ankrd1b ENSDARG00000076192 204 1 - 1.000 - - - - - - - ankyrin repeat domain 1b (cardiac muscle) [Source:ZFIN;Acc:ZDB-GENE-070820-13]
78. FP102016.2 FP102016.2 0 1 - - - - - - - - 1.000
79. si:ch211-114l13.12 ENSDARG00000088019 1 1 - - - - - 1.000 - - - si:ch211-114l13.12 [Source:ZFIN;Acc:ZDB-GENE-120215-211]
80. si:dkey-14o6.8 ENSDARG00000103239 3 1 - - - - - 1.000 - - - si:dkey-14o6.8 [Source:ZFIN;Acc:ZDB-GENE-110913-90]
81. zgc:92161 ENSDARG00000101749 27 1 - - - - - - - - 1.000 zgc:92161 [Source:ZFIN;Acc:ZDB-GENE-040912-22]
82. SLCO2B1 ENSDARG00000054609 0 1 - - - - - - - - 1.000 solute carrier organic anion transporter family, member 2B1 [Source:ZFIN;Acc:ZDB-GENE-051023-6]
83. fshb ENSDARG00000010841 0 1 - 1.000 - - - - - - - follicle stimulating hormone subunit beta [Source:ZFIN;Acc:ZDB-GENE-040806-1]
84. VOPP1 ENSDARG00000076373 12 1 - - - - - 1.000 - - - VOPP1, WBP1/VOPP1 family member [Source:ZFIN;Acc:ZDB-GENE-091204-64]
85. si:dkey-7n6.2 ENSDARG00000094602, ENSDARG00000111257 56 1 - 1.000 - - - - - - - si:dkey-7n6.2 [Source:ZFIN;Acc:ZDB-GENE-091204-262]
86. KIAA0319 KIAA0319 2 1 - - - - - - - - 1.000
87. zgc:123060_1 5 1 - - - - - 1.000 - - - zgc:123060
88. prkar2ab ENSDARG00000009477 2 1 - 1.000 - - - - - - - protein kinase, cAMP-dependent, regulatory, type II, alpha, B [Source:ZFIN;Acc:ZDB-GENE-040426-2427]
89. si:ch211-209p16.1 si:ch211-209p16.1 1 1 - 1.000 - - - - - - -
90. si:dkey-16p6.1_1 ENSDARG00000088245, ENSDARG00000089179, ENSDARG00000090033, ENSDARG00000090192, ENSDARG00000090734, ENSDARG00000091746, ENSDARG00000098189, ENSDARG00000098515, ENSDARG00000099262, ENSDARG00000100061, ENSDARG00000100164, ENSDARG00000101351, ENSDARG00000101689, ENSDARG00000101828, ENSDARG00000102212, ENSDARG00000104416, ENSDARG00000104897, ENSDARG00000105266, ENSDARG00000111518 37 1 - 1.000 - - - - - - - si:dkey-16p6.1 [Source:ZFIN;Acc:ZDB-GENE-081103-43]
91. CR936540.2 CR936540.2 4 1 1.000 - - - - - - - -
92. il11a ENSDARG00000037859 5 1 - 1.000 - - - - - - - interleukin 11a [Source:ZFIN;Acc:ZDB-GENE-051019-1]
93. CT737184.1 ENSDARG00000102726 0 1 - - - - - - - - 1.000
94. TFR2 ENSDARG00000103727 1 1 - 1.000 - - - - - - - transferrin receptor 2 [Source:ZFIN;Acc:ZDB-GENE-041220-3]
95. sult4a1 ENSDARG00000101967 205 1 1.000 - - - - - - - - sulfotransferase family 4A, member 1 [Source:ZFIN;Acc:ZDB-GENE-060421-2705]
96. AL935174.1 ENSDARG00000109674 18 1 - 1.000 - - - - - - -
97. esr2b ENSDARG00000034181 20 1 - - - - - 1.000 - - - estrogen receptor 2b [Source:ZFIN;Acc:ZDB-GENE-030116-1]
98. BX119910.4 BX119910.4 0 1 - - - - - - - - 1.000
99. rc3h2 ENSDARG00000063050 7 1 - - - - - 1.000 - - - ring finger and CCCH-type domains 2 [Source:ZFIN;Acc:ZDB-GENE-060503-694]
100. CABZ01012080.1 CABZ01012080.1 10 1 - 1.000 - - - - - - -

There are 1212 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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