Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for TRIM35

Gene Name Gene ID Reads Annotation
TRIM35 TRIM35 100










Genes with expression patterns similar to TRIM35

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. TRIM35 TRIM35 100 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. zgc:174698 ENSDARG00000075731, ENSDARG00000077266, ENSDARG00000098236 24 2 1.000 1.000 - - - - - - - zgc:174698 [Source:ZFIN;Acc:ZDB-GENE-080204-74]
3. si:ch211-73m21.1 ENSDARG00000096491 10 2 - 1.000 - - 1.000 - - - - si:ch211-73m21.1 [Source:ZFIN;Acc:ZDB-GENE-120709-61]
4. PARP9 ENSDARG00000006848 34 2 1.000 1.000 - - - - - - - poly(ADP-ribose) polymerase family member 9 [Source:ZFIN;Acc:ZDB-GENE-081104-179]
5. AL935174.1 ENSDARG00000109674 18 2 1.000 1.000 - - - - - - -
6. tmprss3a ENSDARG00000053315 5 1.991 - 1.000 0.991 - - - - - - transmembrane serine protease 3a [Source:ZFIN;Acc:ZDB-GENE-070912-70]
7. vti1a ENSDARG00000045065 7 1.991 - 1.000 0.991 - - - - - - vesicle transport through interaction with t-SNAREs 1A [Source:ZFIN;Acc:ZDB-GENE-050809-135]
8. TMEM132A ENSDARG00000105005 4 1.979 - - 0.979 - 1.000 - - - - transmembrane protein 132A [Source:ZFIN;Acc:ZDB-GENE-140106-237]
9. wu:fb63c12 26 1.949 - 1.000 0.949 - - - - - - wu:fb63c12
10. TAF2_1 TAF2_1 222 1.888 - 1.000 0.888 - - - - - -
11. si:dkey-283b1.7 ENSDARG00000053460 10 1.871 - 1.000 - - 0.871 - - - - si:dkey-283b1.7 [Source:ZFIN;Acc:ZDB-GENE-120215-126]
12. stk35_1 ENSDARG00000086856 3 1.854 0.854 1.000 - - - - - - - serine/threonine kinase 35 [Source:ZFIN;Acc:ZDB-GENE-061103-553]
13. dvr1 dvr1 24 1.842 - 1.000 0.842 - - - - - -
14. zgc:173716 9 1.814 - 1.000 - - 0.814 - - - - zgc:173716
15. zgc:172270 ENSDARG00000003632, ENSDARG00000111414 58 1.789 1.000 - - - - - 0.789 - - zgc:172270 [Source:ZFIN;Acc:ZDB-GENE-080204-67]
16. cyp27a1.4 ENSDARG00000055159 47 1.784 - 1.000 0.784 - - - - - - cytochrome P450, family 27, subfamily A, polypeptide 1, gene 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1060]
17. ankrd1b ENSDARG00000076192 204 1.772 - 1.000 - - - 0.772 - - - ankyrin repeat domain 1b (cardiac muscle) [Source:ZFIN;Acc:ZDB-GENE-070820-13]
18. IL17RA_1 IL17RA_1 39 1.759 - 1.000 - - 0.759 - - - -
19. dock11 ENSDARG00000062485 17 1.739 1.000 - 0.739 - - - - - - dedicator of cytokinesis 11 [Source:ZFIN;Acc:ZDB-GENE-060503-196]
20. NETO2 121 1.71 - 1.000 0.710 - - - - - - neuropilin and tolloid like 2, transcript variant X2
21. KLHL38 KLHL38 15 1.707 - 1.000 - 0.707 - - - - -
22. PLCXD1_3 PLCXD1_3 35 1.634 0.730 - - - 0.904 - - - -
23. si:ch211-195m9.3 ENSDARG00000096365 38 1.612 0.818 - - - - 0.794 - - - si:ch211-195m9.3 [Source:ZFIN;Acc:ZDB-GENE-120215-210]
24. si:dkey-208k4.7 si:dkey-208k4.7 14 1.551 0.818 - - - - - 0.733 - -
25. si:ch1073-184j22.2 ENSDARG00000078598 707 1.514 - - - - - 0.754 0.760 - - si:ch1073-184j22.2 [Source:ZFIN;Acc:ZDB-GENE-081104-32]
26. BX901915.1 ENSDARG00000109857 195 1.51 - 0.757 - - - 0.753 - - -
27. pfkmb ENSDARG00000060797, ENSDARG00000109412, ENSDARG00000109653, ENSDARG00000115422 3323 1.477 - 0.701 - - - - 0.776 - - phosphofructokinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-081114-1]
28. ank2b ENSDARG00000043313 3065 1.474 - 0.705 - - - - 0.769 - - ankyrin 2b, neuronal [Source:ZFIN;Acc:ZDB-GENE-041010-165]
29. cthrc1a ENSDARG00000087198 1001 1.446 - 0.702 - - - - 0.744 - - collagen triple helix repeat containing 1a [Source:ZFIN;Acc:ZDB-GENE-040808-22]
30. dhrs13l1 ENSDARG00000098746 102 1 - 1.000 - - - - - - - dehydrogenase/reductase (SDR family) member 13 like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1907]
31. fam221a ENSDARG00000027599 1 1 1.000 - - - - - - - - family with sequence similarity 221, member A [Source:ZFIN;Acc:ZDB-GENE-050320-27]
32. ZBED1_4 ZBED1_4 2 1 - - - - 1.000 - - - -
33. SLC22A14 SLC22A14 24 1 - 1.000 - - - - - - -
34. lgi3 ENSDARG00000041358 46 1 - 1.000 - - - - - - - leucine-rich repeat LGI family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060217-4]
35. CR377211.1 ENSDARG00000079364 24 1 - 1.000 - - - - - - - olfactory receptor 2T2-like [Source:NCBI gene;Acc:103910036]
36. hpse ENSDARG00000063634, ENSDARG00000112827 35 1 - - - - 1.000 - - - - heparanase [Source:ZFIN;Acc:ZDB-GENE-041111-200]
37. BX927064.1 BX927064.1 46 1 - 1.000 - - - - - - -
38. PLEKHS1_1 PLEKHS1_1 23 1 1.000 - - - - - - - -
39. scospondin ENSDARG00000067859 4 1 - - - - 1.000 - - - - subcommissural organ spondin [Source:ZFIN;Acc:ZDB-GENE-051114-1]
40. ZC3H12A ENSDARG00000005271 5 1 - 1.000 - - - - - - - zinc finger CCCH-type containing 12A [Source:ZFIN;Acc:ZDB-GENE-110411-6]
41. CABZ01051901.1 ENSDARG00000113246 12 1 - 1.000 - - - - - - - zona pellucida sperm-binding protein 4-like [Source:NCBI gene;Acc:100334275]
42. pdgfb pdgfb 5 1 - 1.000 - - - - - - -
43. CR391991.2 ENSDARG00000103510 0 1 - - - - 1.000 - - - -
44. SLCO5A1 SLCO5A1 6 1 - 1.000 - - - - - - -
45. vwf ENSDARG00000077231 5 1 - 1.000 - - - - - - - von Willebrand factor [Source:ZFIN;Acc:ZDB-GENE-070103-1]
46. BX005106.1 BX005106.1 22 1 - - - - 1.000 - - - -
47. nt5c1ba ENSDARG00000018153 31 1 1.000 - - - - - - - - 5'-nucleotidase, cytosolic IB a [Source:ZFIN;Acc:ZDB-GENE-070424-103]
48. lonrf1 ENSDARG00000075048 13 1 - 1.000 - - - - - - - LON peptidase N-terminal domain and ring finger 1 [Source:ZFIN;Acc:ZDB-GENE-101021-4]
49. ddhd1b ENSDARG00000037042, ENSDARG00000111543, ENSDARG00000113512 12 1 - 1.000 - - - - - - - DDHD domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-040724-18]
50. BX465848.2 ENSDARG00000116920 6 1 - 1.000 - - - - - - -
51. TRIM14_10 TRIM14_10 9 1 - 1.000 - - - - - - -
52. si:ch211-67f24.7 ENSDARG00000092721, ENSDARG00000092896 11 1 - 1.000 - - - - - - - si:ch211-67f24.7 [Source:ZFIN;Acc:ZDB-GENE-090313-129]
53. gabrr2a ENSDARG00000052982 21 1 - 1.000 - - - - - - - gamma-aminobutyric acid (GABA) A receptor, rho 2a [Source:ZFIN;Acc:ZDB-GENE-060825-164]
54. calhm1 ENSDARG00000077021 2 1 - - - - 1.000 - - - - calcium homeostasis modulator 1 [Source:ZFIN;Acc:ZDB-GENE-081107-71]
55. KIF9 ENSDARG00000031693 11 1 - 1.000 - - - - - - - kinesin family member 9 [Source:ZFIN;Acc:ZDB-GENE-160728-129]
56. flj13639 ENSDARG00000010764 29 1 1.000 - - - - - - - - flj13639 [Source:ZFIN;Acc:ZDB-GENE-030131-8104]
57. spice1 ENSDARG00000004647 27 1 - 1.000 - - - - - - - spindle and centriole associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-041212-64]
58. hoxb1a ENSDARG00000008174 462 1 - 1.000 - - - - - - - homeobox B1a [Source:ZFIN;Acc:ZDB-GENE-990415-101]
59. cdk5r1a ENSDARG00000037916 46 1 1.000 - - - - - - - - cyclin-dependent kinase 5, regulatory subunit 1a (p35) [Source:ZFIN;Acc:ZDB-GENE-080723-17]
60. pmelb ENSDARG00000033760 206 1 - 1.000 - - - - - - - premelanosome protein b [Source:ZFIN;Acc:ZDB-GENE-050912-2]
61. si:ch211-131e11.21 si:ch211-131e11.21 1 1 1.000 - - - - - - - -
62. zgc:174642_1 zgc:174642_1 20 1 - 1.000 - - - - - - -
63. ATP6AP1L ATP6AP1L 164 1 - 1.000 - - - - - - -
64. znf804b ENSDARG00000103396 11 1 - 1.000 - - - - - - - zinc finger protein 804B [Source:ZFIN;Acc:ZDB-GENE-100922-265]
65. BX000999.2 BX000999.2 2353 1 - 1.000 - - - - - - -
66. osbpl6 ENSDARG00000063730 2 1 - 1.000 - - - - - - - oxysterol binding protein-like 6 [Source:ZFIN;Acc:ZDB-GENE-070912-206]
67. U2_2 U2_2 2 1 - - - - 1.000 - - - -
68. nab1a ENSDARG00000042940 26 1 - 1.000 - - - - - - - NGFI-A binding protein 1a (EGR1 binding protein 1) [Source:ZFIN;Acc:ZDB-GENE-050208-574]
69. dclk3 ENSDARG00000078997 2 1 - 1.000 - - - - - - - doublecortin-like kinase 3 [Source:ZFIN;Acc:ZDB-GENE-081104-224]
70. lrp2b ENSDARG00000007906 23 1 - 1.000 - - - - - - - low density lipoprotein receptor-related protein 2b [Source:ZFIN;Acc:ZDB-GENE-111115-1]
71. si:ch211-235f12.5 si:ch211-235f12.5 1 1 1.000 - - - - - - - -
72. tlr5a ENSDARG00000044415 3 1 - - - - 1.000 - - - - toll-like receptor 5a [Source:ZFIN;Acc:ZDB-GENE-040219-14]
73. CU183952.2 CU183952.2 6 1 - 1.000 - - - - - - -
74. cdc42ep2 ENSDARG00000053959 32 1 - 1.000 - - - - - - - CDC42 effector protein (Rho GTPase binding) 2 [Source:ZFIN;Acc:ZDB-GENE-050320-104]
75. CU896645.1 CU896645.1 10 1 - 1.000 - - - - - - -
76. eif2b1_1 ENSDARG00000091402, ENSDARG00000114640 36 1 - 1.000 - - - - - - - eukaryotic translation initiation factor 2B, subunit 1 alpha [Source:ZFIN;Acc:ZDB-GENE-040625-25]
77. uhrf1bp1 ENSDARG00000077011 6 1 - 1.000 - - - - - - - UHRF1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-090312-82]
78. KLHL29 ENSDARG00000087688 1 1 - 1.000 - - - - - - - kelch-like family member 29 [Source:ZFIN;Acc:ZDB-GENE-121114-1]
79. XYLT2 ENSDARG00000059557 1 1 - 1.000 - - - - - - - xylosyltransferase II [Source:ZFIN;Acc:ZDB-GENE-081022-125]
80. CR936337.1 CR936337.1 38 1 - 1.000 - - - - - - -
81. si:ch211-237l4.6 ENSDARG00000056915 49 1 1.000 - - - - - - - - si:ch211-237l4.6 [Source:ZFIN;Acc:ZDB-GENE-040724-42]
82. cpa5 ENSDARG00000021339 61 1 1.000 - - - - - - - - carboxypeptidase A5 [Source:ZFIN;Acc:ZDB-GENE-020514-1]
83. nsun5_1 ENSDARG00000043209 3 1 1.000 - - - - - - - - NOP2/Sun domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2476]
84. CU367845.1 CU367845.1 215 1 - 1.000 - - - - - - -
85. slc12a2_1 ENSDARG00000104573 1 1 - 1.000 - - - - - - - solute carrier family 12 (sodium/potassium/chloride transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040625-53]
86. trim108 ENSDARG00000061762, ENSDARG00000114698 5 1 1.000 - - - - - - - - tripartite motif containing 108 [Source:ZFIN;Acc:ZDB-GENE-060503-670]
87. ATG16L2 ENSDARG00000043238, ENSDARG00000109384 0 1 - - - - 1.000 - - - - ATG16 autophagy related 16-like 2 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060503-197]
88. cabp5b ENSDARG00000028485, ENSDARG00000110087 1 1 - 1.000 - - - - - - - calcium binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-050522-146]
89. CABZ01054405.2 CABZ01054405.2 46 1 - 1.000 - - - - - - -
90. si:dkey-83m22.8 si:dkey-83m22.8 1 1 - 1.000 - - - - - - -
91. si:dkey-91i10.7 si:dkey-91i10.7 9 1 - 1.000 - - - - - - -
92. CNTD1 2 1 - - - - 1.000 - - - - cyclin N-terminal domain containing 1
93. U1 U1 0 1 - - - - 1.000 - - - -
94. soga3a ENSDARG00000063311, ENSDARG00000088571, ENSDARG00000097245 11 1 - 1.000 - - - - - - - SOGA family member 3a [Source:ZFIN;Acc:ZDB-GENE-100921-84]
95. CR932358.2 CR932358.2 15 1 1.000 - - - - - - - -
96. si:ch211-207c6.7 si:ch211-207c6.7 8 1 - 1.000 - - - - - - -
97. SLC1A7 SLC1A7 3 1 1.000 - - - - - - - -
98. C2H10orf67 C2H10orf67 3 1 - 1.000 - - - - - - -
99. si:dkeyp-82h4.2 si:dkeyp-82h4.2 494 1 - 1.000 - - - - - - -
100. styx ENSDARG00000057699 48 1 1.000 - - - - - - - - serine/threonine/tyrosine interacting protein [Source:ZFIN;Acc:ZDB-GENE-050522-45]

There are 1166 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA