Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rprml

Gene Name Gene ID Reads Annotation
rprml ENSDARG00000056768 18 reprimo-like [Source:ZFIN;Acc:ZDB-GENE-070615-20]










Genes with expression patterns similar to rprml

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rprml ENSDARG00000056768 18 4 - - 1.000 - 1.000 - - 1.000 1.000 reprimo-like [Source:ZFIN;Acc:ZDB-GENE-070615-20]
2. CR391998.1 ENSDARG00000091817 15 1.786 - - - - - - - 0.908 0.878 putative protein TPRXL [Source:NCBI gene;Acc:101882255]
3. pvalb5 ENSDARG00000032836 242 1.704 - - - - - - - 0.769 0.935 parvalbumin 5 [Source:ZFIN;Acc:ZDB-GENE-050417-336]
4. lhx2a ENSDARG00000037964 3 1.611 - - - - - - - 0.730 0.881 LIM homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-091118-109]
5. or125-4 ENSDARG00000095417 2 1.611 - - - - - - - 0.730 0.881 odorant receptor, family E, subfamily 125, member 4 [Source:ZFIN;Acc:ZDB-GENE-070806-94]
6. or115-12 ENSDARG00000044748 2 1.611 - - - - - - - 0.730 0.881 odorant receptor, family F, subfamily 115, member 12 [Source:ZFIN;Acc:ZDB-GENE-070806-13]
7. or115-1 ENSDARG00000018521 1 1.608 - - - - - - - 0.730 0.878 odorant receptor, family F, subfamily 115, member 1 [Source:ZFIN;Acc:ZDB-GENE-010309-2]
8. v2rl1 ENSDARG00000005942 1 1.608 - - - - - - - 0.730 0.878 vomeronasal 2 receptor, l1 [Source:ZFIN;Acc:ZDB-GENE-050419-65]
9. or128-1 ENSDARG00000105730 1 1.608 - - - - - - - 0.730 0.878 odorant receptor, family E, subfamily 128, member 1 [Source:ZFIN;Acc:ZDB-GENE-070806-106]
10. foxg1d ENSDARG00000070053 32 1.574 - - - - - - - 0.831 0.743 forkhead box G1d [Source:ZFIN;Acc:ZDB-GENE-080305-12]
11. taar14h ENSDARG00000090464 22 1.522 - - - - - - - 0.710 0.812 trace amine associated receptor 14h [Source:ZFIN;Acc:ZDB-GENE-041014-32]
12. SATB1 SATB1 928 1.465 - - - - - - - 0.751 0.714
13. fam167aa ENSDARG00000067665, ENSDARG00000112798 13 1 - - 1.000 - - - - - - family with sequence similarity 167, member Aa [Source:ZFIN;Acc:ZDB-GENE-061013-209]
14. PATL2 PATL2 10 1 - - 1.000 - - - - - -
15. CR932358.2 CR932358.2 15 1 - - 1.000 - - - - - -
16. sync ENSDARG00000035944 8 1 - - 1.000 - - - - - - syncoilin, intermediate filament protein [Source:ZFIN;Acc:ZDB-GENE-060503-747]
17. PPHLN1 ENSDARG00000045692 4 1 - - 1.000 - - - - - - periphilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1873]
18. Metazoa_SRP_23 Metazoa_SRP_23 3 1 - - 1.000 - - - - - -
19. LRRC2 LRRC2 23 1 - - 1.000 - - - - - -
20. Metazoa_SRP_24 Metazoa_SRP_24 4 1 - - 1.000 - - - - - -
21. ggh ENSDARG00000037176 9 1 - - 1.000 - - - - - - gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase) [Source:ZFIN;Acc:ZDB-GENE-040426-2615]
22. hoxb13a ENSDARG00000056015 174 1 - - - - 1.000 - - - - homeobox B13a [Source:ZFIN;Acc:ZDB-GENE-050812-1]
23. HTRA2_9 HTRA2_9 1 1 - - 1.000 - - - - - -
24. CR847893.2 CR847893.2 2 1 - - 1.000 - - - - - -
25. si:dkey-85n7.9 si:dkey-85n7.9 1 1 - - 1.000 - - - - - -
26. zgc:112408 ENSDARG00000016207, ENSDARG00000116632, ENSDARG00000117067 19 1 - - 1.000 - - - - - - zgc:112408 [Source:ZFIN;Acc:ZDB-GENE-050417-63]
27. si:ch211-132b12.1 ENSDARG00000061480 3 1 - - 1.000 - - - - - - si:ch211-132b12.1 [Source:ZFIN;Acc:ZDB-GENE-050420-315]
28. ndr1 ENSDARG00000057096, ENSDARG00000116539 10 1 - - 1.000 - - - - - - nodal-related 1 [Source:ZFIN;Acc:ZDB-GENE-990415-256]
29. dnaaf3 ENSDARG00000092662 20 1 - - 1.000 - - - - - - dynein, axonemal, assembly factor 3 [Source:ZFIN;Acc:ZDB-GENE-091204-296]
30. DEPDC7 19 0.997 - - - - 0.997 - - - - DEP domain containing 7, transcript variant X1
31. ccdc37 ccdc37 36 0.996 - - - - 0.996 - - - -
32. cnih3 ENSDARG00000014953 25 0.995 - - 0.995 - - - - - - cornichon family AMPA receptor auxiliary protein 3 [Source:ZFIN;Acc:ZDB-GENE-041001-180]
33. sst6 ENSDARG00000093804, ENSDARG00000116656 31 0.992 - - 0.992 - - - - - - somatostatin 6 [Source:ZFIN;Acc:ZDB-GENE-081022-199]
34. MBLAC1 ENSDARG00000077314 1 0.987 - - 0.987 - - - - - - metallo-beta-lactamase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-111102-2]
35. tcte1 ENSDARG00000077387 2 0.987 - - 0.987 - - - - - - t-complex-associated-testis-expressed 1 [Source:ZFIN;Acc:ZDB-GENE-120406-12]
36. hivep3a ENSDARG00000075928 17 0.981 - - 0.981 - - - - - - human immunodeficiency virus type I enhancer binding protein 3a [Source:ZFIN;Acc:ZDB-GENE-081029-2]
37. hhat ENSDARG00000074428 8 0.981 - - 0.981 - - - - - - hedgehog acyltransferase [Source:ZFIN;Acc:ZDB-GENE-051118-1]
38. PEG3_21 PEG3_21 2 0.979 - - 0.979 - - - - - -
39. cyp11c1 ENSDARG00000042014 11 0.976 - - 0.976 - - - - - - cytochrome P450, family 11, subfamily C, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-070828-1]
40. atf5a ENSDARG00000068096 573 0.974 - - - - - - - 0.974 - activating transcription factor 5a [Source:ZFIN;Acc:ZDB-GENE-060526-205]
41. cnga4 ENSDARG00000069383 6 0.973 - - - - - - - - 0.973 cyclic nucleotide gated channel alpha 4 [Source:ZFIN;Acc:ZDB-GENE-070912-292]
42. MFRP MFRP 6 0.973 - - - - - - - - 0.973
43. ube2l3b ENSDARG00000027141 26 0.971 - - - - 0.971 - - - - ubiquitin-conjugating enzyme E2L 3b [Source:ZFIN;Acc:ZDB-GENE-030131-662]
44. cpn1_2 ENSDARG00000005185, ENSDARG00000096728 14 0.971 - - 0.971 - - - - - - carboxypeptidase N, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9116]
45. FRMPD1_2 FRMPD1_2 2 0.971 - - - - - - - - 0.971
46. tbx6 ENSDARG00000011785 132 0.962 - - - - 0.962 - - - - T-box 6 [Source:ZFIN;Acc:ZDB-GENE-020416-5]
47. irf1b ENSDARG00000043249 30 0.959 - - - - - - - - 0.959 interferon regulatory factor 1b [Source:ZFIN;Acc:ZDB-GENE-041114-13]
48. si:dkey-46g23.3 si:dkey-46g23.3 16 0.958 - - 0.958 - - - - - -
49. CT583679.2 CT583679.2 10 0.958 - - 0.958 - - - - - -
50. dolk ENSDARG00000076991 7 0.958 - - 0.958 - - - - - - dolichol kinase [Source:ZFIN;Acc:ZDB-GENE-070410-59]
51. lonrf1 ENSDARG00000075048 13 0.947 - - 0.947 - - - - - - LON peptidase N-terminal domain and ring finger 1 [Source:ZFIN;Acc:ZDB-GENE-101021-4]
52. C13H2orf50 C13H2orf50 87 0.946 - - - - 0.946 - - - -
53. her1 ENSDARG00000014722 29 0.944 - - - - 0.944 - - - - hairy-related 1 [Source:ZFIN;Acc:ZDB-GENE-980526-125]
54. ccdc42b ccdc42b 18 0.94 - - - - 0.940 - - - -
55. tbx16 ENSDARG00000007329 255 0.939 - - - - 0.939 - - - - T-box 16 [Source:ZFIN;Acc:ZDB-GENE-990615-5]
56. oaz2b ENSDARG00000059815 38 0.937 - - 0.937 - - - - - - ornithine decarboxylase antizyme 2b [Source:ZFIN;Acc:ZDB-GENE-070313-1]
57. tnfb ENSDARG00000013598 94 0.926 - - 0.926 - - - - - - tumor necrosis factor b (TNF superfamily, member 2) [Source:ZFIN;Acc:ZDB-GENE-050601-2]
58. BX571811.2 ENSDARG00000105655 11 0.923 - - 0.923 - - - - - -
59. wnt5a ENSDARG00000104973 21 0.92 - - - - 0.920 - - - - wingless-type MMTV integration site family, member 5a [Source:ZFIN;Acc:ZDB-GENE-060328-3]
60. cysltr1 ENSDARG00000058246, ENSDARG00000116295 25 0.918 - - 0.918 - - - - - - cysteinyl leukotriene receptor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-250]
61. si:ch211-197h24.7 si:ch211-197h24.7 25 0.918 - - 0.918 - - - - - -
62. cyp2aa2 ENSDARG00000104811 77 0.917 - - 0.917 - - - - - - y cytochrome P450, family 2, subfamily AA, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061027-232]
63. hoxa13b ENSDARG00000036254 404 0.915 - - - - 0.915 - - - - homeobox A13b [Source:ZFIN;Acc:ZDB-GENE-980526-365]
64. rem2 ENSDARG00000074064, ENSDARG00000109687 219 0.915 - - - - 0.915 - - - - RAS (RAD and GEM)-like GTP binding 2 [Source:ZFIN;Acc:ZDB-GENE-081110-1]
65. NOTUM NOTUM 232 0.912 - - - - 0.912 - - - -
66. stxbp6l ENSDARG00000028354, ENSDARG00000112083, ENSDARG00000113476 43 0.911 - - 0.911 - - - - - - syntaxin binding protein 6 (amisyn), like [Source:ZFIN;Acc:ZDB-GENE-040724-16]
67. f2rl1.1 ENSDARG00000068856 47 0.911 - - - - 0.911 - - - - coagulation factor II (thrombin) receptor-like 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-061215-140]
68. si:ch211-176g6.2 ENSDARG00000079791 4 0.909 - - 0.909 - - - - - - si:ch211-176g6.2 [Source:ZFIN;Acc:ZDB-GENE-121214-224]
69. CR936975.1 ENSDARG00000096862 22 0.908 - - 0.908 - - - - - -
70. kcnj1a.1 ENSDARG00000091232 110 0.908 - - 0.908 - - - - - - potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-031118-55]
71. Mar-02_1 Mar-02_1 146 0.908 - - - - 0.908 - - - -
72. si:rp71-1f1.4 ENSDARG00000092476 11 0.905 - - 0.905 - - - - - - si:rp71-1f1.4 [Source:ZFIN;Acc:ZDB-GENE-040724-93]
73. kif26bb ENSDARG00000024575 18 0.901 - - - - - - - 0.901 - kinesin family member 26Bb [Source:ZFIN;Acc:ZDB-GENE-041001-188]
74. cpa6 ENSDARG00000012013 73 0.9 - - - - 0.900 - - - - carboxypeptidase A6 [Source:ZFIN;Acc:ZDB-GENE-091204-331]
75. hoxa13a ENSDARG00000100312 543 0.897 - - - - 0.897 - - - - homeobox A13a [Source:ZFIN;Acc:ZDB-GENE-990415-5]
76. plaub ENSDARG00000039145 35 0.894 - - 0.894 - - - - - - plasminogen activator, urokinase b [Source:ZFIN;Acc:ZDB-GENE-030619-15]
77. ssr1 ENSDARG00000101627 151 0.894 - - - - 0.894 - - - - signal sequence receptor, alpha [Source:ZFIN;Acc:ZDB-GENE-030826-28]
78. dok6 ENSDARG00000063032 88 0.894 - - - - - - - 0.894 - docking protein 6 [Source:ZFIN;Acc:ZDB-GENE-070410-50]
79. fgf3 ENSDARG00000101540 75 0.893 - - - - 0.893 - - - - fibroblast growth factor 3 [Source:ZFIN;Acc:ZDB-GENE-980526-178]
80. nif3l1 ENSDARG00000045249 28 0.891 - - 0.891 - - - - - - NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050706-80]
81. foxj1b ENSDARG00000088290 343 0.89 - - - - 0.890 - - - - forkhead box J1b [Source:ZFIN;Acc:ZDB-GENE-041212-76]
82. mgat3 mgat3 195 0.889 - - 0.889 - - - - - -
83. si:dkey-56m15.3 ENSDARG00000104262 3 0.889 - - 0.889 - - - - - - si:dkey-56m15.3 [Source:ZFIN;Acc:ZDB-GENE-110913-96]
84. pou5f3 ENSDARG00000044774 212 0.888 - - - - 0.888 - - - - POU domain, class 5, transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-980526-485]
85. lppr5b lppr5b 23 0.888 - - 0.888 - - - - - -
86. CT583626.2 CT583626.2 53 0.887 - - - - 0.887 - - - -
87. neurod2 ENSDARG00000016854 6 0.886 - - - - - - - - 0.886 neurogenic differentiation 2 [Source:ZFIN;Acc:ZDB-GENE-010608-3]
88. hoxa11a ENSDARG00000104162 283 0.885 - - - - 0.885 - - - - homeobox A11a [Source:ZFIN;Acc:ZDB-GENE-000823-8]
89. or128-5 ENSDARG00000087635 5 0.884 - - - - - - - - 0.884 odorant receptor, family E, subfamily 128, member 5 [Source:ZFIN;Acc:ZDB-GENE-980526-343]
90. sepn1 801 0.882 - - - - 0.882 - - - - selenoprotein N, 1
91. FOXO6 FOXO6 5 0.881 - - - - - - - - 0.881
92. si:ch211-286m4.1 si:ch211-286m4.1 47 0.881 - - - - - - - - 0.881
93. or111-3 ENSDARG00000086633 1 0.881 - - - - - - - - 0.881 odorant receptor, family D, subfamily 111, member 3 [Source:ZFIN;Acc:ZDB-GENE-010308-17]
94. asic4a ENSDARG00000025162 25 0.881 - - 0.881 - - - - - - acid-sensing (proton-gated) ion channel family member 4a [Source:ZFIN;Acc:ZDB-GENE-040513-5]
95. PDE1C_1 PDE1C_1 2 0.881 - - - - - - - - 0.881
96. CR388231.2 ENSDARG00000105547 25 0.881 - - - - - - - - 0.881 uncharacterized LOC101883418 [Source:NCBI gene;Acc:101883418]
97. DHDH DHDH 15 0.881 - - - - - - - - 0.881
98. kcnh4 kcnh4 6 0.881 - - - - - - - - 0.881
99. abcg2d ENSDARG00000016818 0 0.881 - - - - - - - - 0.881 ATP-binding cassette, sub-family G (WHITE), member 2d [Source:ZFIN;Acc:ZDB-GENE-050517-38]
100. TMBIM1 TMBIM1 2 0.881 - - - - - - - - 0.881

There are 379 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA