Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rpgrb

Gene Name Gene ID Reads Annotation
rpgrb ENSDARG00000057074 117 retinitis pigmentosa GTPase regulator b [Source:ZFIN;Acc:ZDB-GENE-081015-2]










Genes with expression patterns similar to rpgrb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rpgrb ENSDARG00000057074 117 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 retinitis pigmentosa GTPase regulator b [Source:ZFIN;Acc:ZDB-GENE-081015-2]
2. vil1 ENSDARG00000040466 81 1.689 - 0.823 - - 0.866 - - - - villin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-799]
3. TSPEAR TSPEAR 9 1.67 - 0.839 0.831 - - - - - -
4. slc35e1 ENSDARG00000011945 201 1.662 - - - - - 0.909 0.753 - - solute carrier family 35, member E1 [Source:ZFIN;Acc:ZDB-GENE-040426-2033]
5. si:ch1073-160m15.1 si:ch1073-160m15.1 74 1.638 - - - - 0.756 - 0.882 - -
6. ca4b ENSDARG00000042293 5 1.637 0.798 0.839 - - - - - - - carbonic anhydrase IV b [Source:ZFIN;Acc:ZDB-GENE-080815-5]
7. zgc:162183 ENSDARG00000074663, ENSDARG00000116229 403 1.632 - 0.887 - - 0.745 - - - - zgc:162183 [Source:ZFIN;Acc:ZDB-GENE-070410-30]
8. map3k8 ENSDARG00000061710 76 1.623 0.798 - 0.825 - - - - - - mitogen-activated protein kinase kinase kinase 8 [Source:ZFIN;Acc:ZDB-GENE-100316-8]
9. KCNN2 ENSDARG00000014939 25 1.621 0.806 - 0.815 - - - - - - potassium calcium-activated channel subfamily N member 2 [Source:HGNC Symbol;Acc:HGNC:6291]
10. CABZ01081748.1 ENSDARG00000102139 31 1.607 0.798 0.809 - - - - - - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:100007471]
11. si:dkey-6f10.3 ENSDARG00000093660 116 1.606 - 0.741 - - - 0.865 - - - si:dkey-6f10.3 [Source:ZFIN;Acc:ZDB-GENE-041210-339]
12. pcsk5a ENSDARG00000067537 44 1.599 - - - - 0.881 - 0.718 - - proprotein convertase subtilisin/kexin type 5a [Source:ZFIN;Acc:ZDB-GENE-060531-130]
13. KCNAB1 KCNAB1 918 1.596 0.798 0.798 - - - - - - -
14. camsap1b ENSDARG00000035122 492 1.587 0.773 0.814 - - - - - - - calmodulin regulated spectrin-associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-070705-301]
15. BX511263.1_1 BX511263.1_1 368 1.587 - 0.720 - - - 0.867 - - -
16. CU571260.1 CU571260.1 163 1.582 0.846 0.736 - - - - - - -
17. CR790363.1 ENSDARG00000097364 145 1.582 - - - - - 0.720 0.862 - -
18. map3k1 ENSDARG00000098405 3043 1.578 - 0.804 - - - 0.774 - - - mitogen-activated protein kinase kinase kinase 1, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-090313-412]
19. C20H1orf95 C20H1orf95 12 1.571 0.732 0.839 - - - - - - -
20. sass6 ENSDARG00000058346 225 1.565 - 0.857 - - 0.708 - - - - SAS-6 centriolar assembly protein [Source:ZFIN;Acc:ZDB-GENE-040426-2784]
21. gabrr2b ENSDARG00000014057 9 1.559 - 0.839 - - - 0.720 - - - gamma-aminobutyric acid (GABA) A receptor, rho 2b [Source:ZFIN;Acc:ZDB-GENE-041014-174]
22. FASTKD5 181 1.555 - 0.828 0.727 - - - - - - FAST kinase domains 5
23. dmrta2 ENSDARG00000039412 328 1.554 0.751 0.803 - - - - - - - DMRT-like family A2 [Source:ZFIN;Acc:ZDB-GENE-041116-2]
24. fopnl ENSDARG00000071198 1002 1.554 0.715 0.839 - - - - - - - fgfr1op N-terminal like [Source:ZFIN;Acc:ZDB-GENE-101124-1]
25. sorcs3b ENSDARG00000077349 72 1.547 - 0.839 - - - - 0.708 - - sortilin related VPS10 domain containing receptor 3b [Source:ZFIN;Acc:ZDB-GENE-131121-455]
26. si:ch73-186j5.4 si:ch73-186j5.4 70 1.546 - 0.772 - - 0.774 - - - -
27. zgc:162945 ENSDARG00000028815, ENSDARG00000116996 439 1.537 0.717 - - - - - 0.820 - - zgc:162945 [Source:ZFIN;Acc:ZDB-GENE-030131-3975]
28. GPRIN3 GPRIN3 169 1.535 - - - - 0.824 - 0.711 - -
29. SBK1 SBK1 154 1.534 - 0.759 - - 0.775 - - - -
30. CCDC115 ENSDARG00000033533, ENSDARG00000109365 353 1.534 - 0.772 - - - 0.762 - - - coiled-coil domain containing 115 [Source:ZFIN;Acc:ZDB-GENE-050227-20]
31. CR677591.1 CR677591.1 19 1.526 - 0.806 - - - 0.720 - - -
32. kif16ba ENSDARG00000100225 114 1.526 - 0.812 - - - - 0.714 - - kinesin family member 16Ba [Source:ZFIN;Acc:ZDB-GENE-090313-233]
33. grm7p grm7p 225 1.52 - - - - - 0.788 0.732 - -
34. NMUR1 NMUR1 30 1.52 0.798 - - - - 0.722 - - -
35. si:dkey-9i23.6 ENSDARG00000094678 58 1.518 0.798 - - - - 0.720 - - - si:dkey-9i23.6 [Source:ZFIN;Acc:ZDB-GENE-090313-365]
36. exoc4 ENSDARG00000004336 32 1.517 - 0.797 - - - 0.720 - - - exocyst complex component 4 [Source:ZFIN;Acc:ZDB-GENE-041210-112]
37. fgf24 ENSDARG00000037677 242 1.507 - 0.713 0.794 - - - - - - fibroblast growth factor 24 [Source:ZFIN;Acc:ZDB-GENE-030708-1]
38. si:dkey-54g2.6 si:dkey-54g2.6 252 1.5 - 0.731 - - - - 0.769 - -
39. syne2a 63 1.483 - 0.770 - - - 0.713 - - - spectrin repeat containing, nuclear envelope 2a
40. SHPRH ENSDARG00000075884 382 1.482 - 0.711 - - - - 0.771 - - SNF2 histone linker PHD RING helicase [Source:ZFIN;Acc:ZDB-GENE-110512-2]
41. si:dkey-165n16.1 ENSDARG00000087048 283 1.472 0.727 - 0.745 - - - - - - si:dkey-165n16.1 [Source:ZFIN;Acc:ZDB-GENE-100922-224]
42. hist2h3c ENSDARG00000094154 124 1.468 0.702 0.766 - - - - - - - histone cluster 2, H3c [Source:ZFIN;Acc:ZDB-GENE-070424-8]
43. PDE2A 122 1.448 - 0.729 - - 0.719 - - - - phosphodiesterase 2A
44. GRAMD2 GRAMD2 300 1.436 0.731 - 0.705 - - - - - -
45. CABZ01085657.1 CABZ01085657.1 23 1.435 - 0.715 - - - 0.720 - - -
46. POLR2M ENSDARG00000074968, ENSDARG00000113507 137 1.425 0.702 - - - 0.723 - - - - RNA polymerase II subunit M [Source:ZFIN;Acc:ZDB-GENE-160728-95]
47. KCTD9 KCTD9 147 0.944 - - - - - 0.944 - - -
48. snx29 ENSDARG00000077317 239 0.935 - - - - - 0.935 - - - sorting nexin 29 [Source:ZFIN;Acc:ZDB-GENE-121105-13]
49. tmem120b ENSDARG00000042929, ENSDARG00000115087 92 0.927 - - - - 0.927 - - - - transmembrane protein 120B [Source:ZFIN;Acc:ZDB-GENE-050522-49]
50. CABZ01061146.1 CABZ01061146.1 28 0.926 - - - - - 0.926 - - -
51. her4.2 ENSDARG00000056729, ENSDARG00000094426 289 0.924 - - - - 0.924 - - - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
52. fam155a ENSDARG00000075858 91 0.923 - - - - - 0.923 - - - family with sequence similarity 155, member A [Source:ZFIN;Acc:ZDB-GENE-090313-34]
53. SMC6 ENSDARG00000091821 165 0.923 - - - - - 0.923 - - - structural maintenance of chromosomes 6 [Source:ZFIN;Acc:ZDB-GENE-110303-1]
54. si:dkey-178a21.3 si:dkey-178a21.3 23 0.917 - - - - 0.917 - - - -
55. zgc:194469 ENSDARG00000104367 93 0.907 - - - - 0.907 - - - - zgc:194469 [Source:ZFIN;Acc:ZDB-GENE-081022-114]
56. si:dkeyp-84g1.3 si:dkeyp-84g1.3 25 0.906 - - - - 0.906 - - - -
57. ints12_1 ENSDARG00000091678 11 0.906 - - - - 0.906 - - - - integrator complex subunit 12 [Source:ZFIN;Acc:ZDB-GENE-040625-178]
58. sts ENSDARG00000053241 10 0.905 - - - - 0.905 - - - - steroid sulfatase (microsomal), isozyme S [Source:ZFIN;Acc:ZDB-GENE-030717-5]
59. nkx2.7 ENSDARG00000021232 38 0.905 - - - - 0.905 - - - - NK2 transcription factor related 7 [Source:ZFIN;Acc:ZDB-GENE-990415-179]
60. BX957278.1_1 ENSDARG00000010940 9 0.905 - - - - 0.905 - - - -
61. PCBP3 ENSDARG00000054378 17 0.904 - - - - 0.904 - - - - poly(rC) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-157]
62. BX664721.1 ENSDARG00000051804 21 0.904 - - - - 0.904 - - - -
63. lnx2b ENSDARG00000071478 654 0.904 - 0.904 - - - - - - - ligand of numb-protein X 2b [Source:ZFIN;Acc:ZDB-GENE-040426-2500]
64. si:dkey-91i10.7 si:dkey-91i10.7 9 0.904 - - - - 0.904 - - - -
65. GALNT9 ENSDARG00000006832 120 0.903 - - - - 0.903 - - - - polypeptide N-acetylgalactosaminyltransferase 9 [Source:ZFIN;Acc:ZDB-GENE-060526-21]
66. CU467982.1 CU467982.1 12 0.903 - - - - 0.903 - - - -
67. BX664622.3 BX664622.3 42 0.903 - - - - 0.903 - - - -
68. pacsin1b ENSDARG00000042128 1051 0.902 - 0.902 - - - - - - - protein kinase C and casein kinase substrate in neurons 1b [Source:ZFIN;Acc:ZDB-GENE-050913-35]
69. PRF1 PRF1 69 0.901 - - - - 0.901 - - - -
70. IGFN1_1 IGFN1_1 29 0.901 - - - - - 0.901 - - -
71. pgr ENSDARG00000035966 10 0.899 - - - - 0.899 - - - - progesterone receptor [Source:ZFIN;Acc:ZDB-GENE-990415-214]
72. gtf3c3 ENSDARG00000043247 202 0.899 - - - - - 0.899 - - - general transcription factor IIIC, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-040914-80]
73. pros1 ENSDARG00000068261 276 0.895 - 0.895 - - - - - - - protein S [Source:ZFIN;Acc:ZDB-GENE-061013-657]
74. CENPQ 8 0.894 - - - - 0.894 - - - - centromere protein Q
75. CR848814.2 CR848814.2 19 0.894 - - - - 0.894 - - - -
76. SNORA74 SNORA74 284 0.893 - - - - 0.893 - - - -
77. calhm2 ENSDARG00000039482 138 0.892 - - - - - 0.892 - - - calcium homeostasis modulator 2 [Source:ZFIN;Acc:ZDB-GENE-030616-561]
78. zgc:112175 ENSDARG00000037810 402 0.89 - - - - - 0.890 - - - zgc:112175 [Source:ZFIN;Acc:ZDB-GENE-050417-220]
79. CT025934.2 CT025934.2 22 0.89 - 0.890 - - - - - - -
80. PFKL_1 PFKL_1 298 0.888 - - - - - 0.888 - - -
81. syt16 ENSDARG00000030761 322 0.886 - - - - 0.886 - - - - synaptotagmin XVI [Source:ZFIN;Acc:ZDB-GENE-090313-210]
82. C8H9orf116 C8H9orf116 379 0.886 - 0.886 - - - - - - -
83. trim66 ENSDARG00000054332 16 0.886 - - - - 0.886 - - - - tripartite motif containing 66 [Source:ZFIN;Acc:ZDB-GENE-040724-145]
84. kcnh2 kcnh2 76 0.886 - - - - 0.886 - - - -
85. pygl ENSDARG00000002197 192 0.886 - - - - 0.886 - - - - phosphorylase, glycogen, liver [Source:ZFIN;Acc:ZDB-GENE-041205-1]
86. cacna2d2 cacna2d2 16 0.886 - - - - 0.886 - - - -
87. wdr35 ENSDARG00000069269 492 0.885 - 0.885 - - - - - - - WD repeat domain 35 [Source:ZFIN;Acc:ZDB-GENE-060810-148]
88. si:dkey-45k15.1 ENSDARG00000061714 32 0.885 - - - - 0.885 - - - - si:dkey-45k15.1 [Source:ZFIN;Acc:ZDB-GENE-081107-67]
89. col5a3b ENSDARG00000101816 56 0.885 - - - - 0.885 - - - - collagen, type V, alpha 3b [Source:ZFIN;Acc:ZDB-GENE-110728-4]
90. SLC36A4 ENSDARG00000039661 175 0.882 0.882 - - - - - - - - solute carrier family 36 (proton/amino acid symporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-050309-239]
91. gxylt1b ENSDARG00000022550 160 0.88 - - - - 0.880 - - - - glucoside xylosyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-041210-116]
92. gdpd3b ENSDARG00000006944 19 0.878 - - - - 0.878 - - - - glycerophosphodiester phosphodiesterase domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-121210-2]
93. mcm6l ENSDARG00000033231, ENSDARG00000111624 23 0.877 - - - - 0.877 - - - - MCM6 minichromosome maintenance deficient 6, like [Source:ZFIN;Acc:ZDB-GENE-050913-141]
94. fut8 fut8 652 0.877 - - - - - 0.877 - - -
95. si:dkey-276l13.6 si:dkey-276l13.6 71 0.877 - - - - 0.877 - - - -
96. rpp25l ENSDARG00000070131 492 0.877 - - - - - 0.877 - - - ribonuclease P/MRP 25 subunit-like [Source:ZFIN;Acc:ZDB-GENE-040718-275]
97. uso1 ENSDARG00000019581 479 0.877 - - - - - 0.877 - - - USO1 vesicle transport factor [Source:ZFIN;Acc:ZDB-GENE-040426-688]
98. cox5b2 ENSDARG00000068738 182 0.877 - - - - 0.877 - - - - cytochrome c oxidase subunit 5B2 [Source:ZFIN;Acc:ZDB-GENE-060825-71]
99. znf236 ENSDARG00000095890 410 0.876 - - - - - - 0.876 - - zinc finger protein 236 [Source:ZFIN;Acc:ZDB-GENE-041111-195]
100. loh12cr1 loh12cr1 346 0.875 - 0.875 - - - - - - -

There are 1212 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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