Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for CCDC115

Gene Name Gene ID Reads Annotation
CCDC115 ENSDARG00000033533, ENSDARG00000109365 353 coiled-coil domain containing 115 [Source:ZFIN;Acc:ZDB-GENE-050227-20]










Genes with expression patterns similar to CCDC115

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. CCDC115 ENSDARG00000033533, ENSDARG00000109365 353 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 coiled-coil domain containing 115 [Source:ZFIN;Acc:ZDB-GENE-050227-20]
2. swap70b ENSDARG00000057286, ENSDARG00000109359, ENSDARG00000110820 292 2.173 - 0.735 - 0.726 - - 0.712 - - switching B cell complex subunit SWAP70b [Source:ZFIN;Acc:ZDB-GENE-030131-3587]
3. FAM126B 588 1.801 - - - - - 0.901 - 0.900 - family with sequence similarity 126 member B
4. SH2B2 ENSDARG00000090421 245 1.797 - 0.849 - - - - - 0.948 - SH2B adaptor protein 2 [Source:HGNC Symbol;Acc:HGNC:17381]
5. SNAPC2 ENSDARG00000036473 158 1.785 - 0.840 - - - - - 0.945 - small nuclear RNA activating complex, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-120328-2]
6. igdcc4 ENSDARG00000076919 1303 1.72 - - - - - 0.795 - 0.925 - immunoglobulin superfamily, DCC subclass, member 4 [Source:ZFIN;Acc:ZDB-GENE-080327-32]
7. stmn4 ENSDARG00000030106 518 1.718 - - - - - 0.777 - 0.941 - stathmin-like 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2732]
8. slc46a1 ENSDARG00000026149 297 1.713 - 0.855 - - - 0.858 - - - solute carrier family 46 (folate transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1012]
9. ints3 ENSDARG00000016811 339 1.712 - - - - - 0.864 0.848 - - integrator complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-060503-634]
10. slc2a8 ENSDARG00000104278 764 1.706 0.753 - - - - - - 0.953 - solute carrier family 2 (facilitated glucose transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-030829-25]
11. pdp2 ENSDARG00000058571, ENSDARG00000115915 464 1.704 - - - - - 0.860 - 0.844 - putative pyruvate dehydrogenase phosphatase isoenzyme 2 [Source:ZFIN;Acc:ZDB-GENE-000921-2]
12. CU463790.1 CU463790.1 60 1.703 - - - 0.813 - 0.890 - - -
13. b3galt2 ENSDARG00000102061, ENSDARG00000114032 216 1.702 - 0.822 - - - 0.880 - - - UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2078]
14. nedd4l ENSDARG00000060006 1669 1.689 - - - - - 0.819 - 0.870 - neural precursor cell expressed, developmentally down-regulated 4-like [Source:ZFIN;Acc:ZDB-GENE-051118-2]
15. LRRC61 ENSDARG00000077357 55 1.685 - 0.844 - 0.841 - - - - - leucine rich repeat containing 61 [Source:ZFIN;Acc:ZDB-GENE-060616-245]
16. CABZ01100187.1 CABZ01100187.1 191 1.685 - 0.840 - - - 0.845 - - -
17. plat ENSDARG00000062707 491 1.681 - 0.834 - - - 0.847 - - - plasminogen activator, tissue [Source:ZFIN;Acc:ZDB-GENE-081104-181]
18. C5H3orf30 C5H3orf30 63 1.681 - 0.795 - - - 0.886 - - -
19. atl1 ENSDARG00000060481 251 1.679 - - - - - 0.778 - 0.901 - atlastin GTPase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8003]
20. mlh1 ENSDARG00000025948 130 1.679 - - - - - - 0.727 0.952 - mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-040426-1600]
21. si:ch211-269i23.2 432 1.678 - 0.742 - - - - - 0.936 - si:ch211-269i23.2, transcript variant X3
22. efna2 efna2 428 1.677 - - - - - 0.808 - 0.869 -
23. ACBD3 ENSDARG00000042623 159 1.675 - 0.863 - 0.812 - - - - - acyl-Coenzyme A binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1930]
24. ppp1r15a ENSDARG00000069135 871 1.67 - - - - - 0.850 - 0.820 - protein phosphatase 1, regulatory subunit 15A [Source:ZFIN;Acc:ZDB-GENE-030131-4408]
25. UBL7 UBL7 197 1.667 - 0.825 - - - 0.842 - - -
26. f2rl2 ENSDARG00000090524 37 1.666 - 0.801 - - - 0.865 - - - coagulation factor II (thrombin) receptor-like 2 [Source:ZFIN;Acc:ZDB-GENE-110127-4]
27. si:dkeyp-93h6.3 si:dkeyp-93h6.3 31 1.664 - 0.807 - - - 0.857 - - -
28. NFRKB ENSDARG00000091512 646 1.661 - 0.767 - - - - - 0.894 - nuclear factor related to kappaB binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-6419]
29. cyp2y3 ENSDARG00000068493, ENSDARG00000101423 3119 1.659 - - - - - 0.765 - 0.894 - cytochrome P450, family 2, subfamily Y, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-050522-490]
30. si:ch211-254c8.2 233 1.659 - 0.704 - - - - - 0.955 - si:ch211-254c8.2, transcript variant X4
31. CR339053.3 CR339053.3 244 1.659 - 0.841 - - - 0.818 - - -
32. RAPGEFL1 ENSDARG00000079912 1074 1.657 - - - - 0.767 - - 0.890 - Rap guanine nucleotide exchange factor (GEF)-like 1 [Source:ZFIN;Acc:ZDB-GENE-131121-404]
33. DENND6A DENND6A 648 1.652 - - - - - 0.751 - 0.901 -
34. srcap ENSDARG00000005236 1740 1.65 - 0.842 - - - 0.808 - - - Snf2-related CREBBP activator protein [Source:ZFIN;Acc:ZDB-GENE-041008-127]
35. si:ch211-241e1.5 ENSDARG00000008906 70 1.65 - 0.807 - - - 0.843 - - - si:ch211-241e1.5 [Source:ZFIN;Acc:ZDB-GENE-030131-6298]
36. si:dkey-54g2.6 si:dkey-54g2.6 252 1.647 - 0.801 - - - 0.846 - - -
37. si:dkey-14o1.14 si:dkey-14o1.14 142 1.645 - 0.763 - - - 0.882 - - -
38. hspbp1 ENSDARG00000102937 260 1.642 - 0.780 - - - 0.862 - - - HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 [Source:ZFIN;Acc:ZDB-GENE-030219-55]
39. loh12cr1 loh12cr1 346 1.636 - 0.886 - - - 0.750 - - -
40. CD97_1 CD97_1 197 1.635 - 0.860 - 0.775 - - - - -
41. kctd1 ENSDARG00000074056 652 1.628 - - - 0.759 - 0.869 - - - potassium channel tetramerization domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040724-194]
42. phf10 ENSDARG00000070084 1210 1.627 - 0.718 - - - 0.909 - - - PHD finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1573]
43. slc25a23b ENSDARG00000024708 51 1.611 - 0.763 - - - 0.848 - - - solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23b [Source:ZFIN;Acc:ZDB-GENE-040724-220]
44. rab14_1 ENSDARG00000074246 481 1.61 - - - 0.750 - 0.860 - - - RAB14, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030826-20]
45. MRVI1 ENSDARG00000074602 443 1.609 - 0.701 - - - - - 0.908 - murine retrovirus integration site 1 homolog [Source:ZFIN;Acc:ZDB-GENE-120221-4]
46. SPDEF ENSDARG00000029930 60 1.606 0.816 0.790 - - - - - - - SAM pointed domain containing ETS transcription factor [Source:HGNC Symbol;Acc:HGNC:17257]
47. map3k1 ENSDARG00000098405 3043 1.604 - 0.808 - - - 0.796 - - - mitogen-activated protein kinase kinase kinase 1, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-090313-412]
48. OLFM4_1 OLFM4_1 213 1.601 - - - - - - 0.723 0.878 -
49. rab25a ENSDARG00000058800 451 1.599 - - - - - 0.836 - 0.763 - RAB25, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-041212-69]
50. nrbf2 nrbf2 604 1.597 - 0.794 - - - 0.803 - - -
51. gemin5 ENSDARG00000079257 152 1.593 - 0.826 - - - - 0.767 - - gem (nuclear organelle) associated protein 5 [Source:ZFIN;Acc:ZDB-GENE-031112-9]
52. smcr8a ENSDARG00000052818 559 1.591 0.729 - - - - 0.862 - - - Smith-Magenis syndrome chromosome region, candidate 8a [Source:ZFIN;Acc:ZDB-GENE-071212-4]
53. SHPRH ENSDARG00000075884 382 1.588 - 0.701 - - - - - 0.887 - SNF2 histone linker PHD RING helicase [Source:ZFIN;Acc:ZDB-GENE-110512-2]
54. nexmifb ENSDARG00000029296 416 1.584 - 0.808 - - - 0.776 - - - neurite extension and migration factor b [Source:ZFIN;Acc:ZDB-GENE-140106-18]
55. MLLT1 MLLT1 349 1.578 - - - - - 0.827 0.751 - -
56. wrap53 ENSDARG00000086150 975 1.575 - - - - - 0.726 - 0.849 - WD repeat containing, antisense to TP53 [Source:ZFIN;Acc:ZDB-GENE-030131-515]
57. kif18a ENSDARG00000008022 546 1.571 - 0.717 - - - 0.854 - - - kinesin family member 18A [Source:ZFIN;Acc:ZDB-GENE-040426-862]
58. marveld3 ENSDARG00000099654 113 1.569 - - - 0.761 - 0.808 - - - MARVEL domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1641]
59. ireb2 ENSDARG00000021466 699 1.565 - 0.785 - - - 0.780 - - - iron-responsive element binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-051205-1]
60. tbc1d12a ENSDARG00000038237 698 1.562 - 0.705 - - - - - 0.857 - TBC1 domain family, member 12a [Source:ZFIN;Acc:ZDB-GENE-030131-3920]
61. dgat1b ENSDARG00000054914 119 1.554 - - - - - 0.763 0.791 - - diacylglycerol O-acyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-040718-158]
62. ildr2 ENSDARG00000014180 791 1.552 - 0.821 - - - 0.731 - - - immunoglobulin-like domain containing receptor 2 [Source:ZFIN;Acc:ZDB-GENE-050706-83]
63. prkacbb_1 ENSDARG00000059125 83 1.548 - 0.794 - 0.754 - - - - - protein kinase, cAMP-dependent, catalytic, beta b [Source:ZFIN;Acc:ZDB-GENE-050904-4]
64. C18H16orf70 C18H16orf70 542 1.548 - - - - - 0.829 0.719 - -
65. si:dkeyp-100a1.6 ENSDARG00000092141 33 1.548 - 0.807 - - - - 0.741 - - si:dkeyp-100a1.6 [Source:ZFIN;Acc:ZDB-GENE-081104-448]
66. nmnat1 ENSDARG00000105748 102 1.54 - - - 0.737 - - 0.803 - - nicotinamide nucleotide adenylyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-101]
67. hs3st3l ENSDARG00000059903 184 1.539 - - - - - 0.790 0.749 - - heparan sulfate (glucosamine) 3-O-sulfotransferase 3-like [Source:ZFIN;Acc:ZDB-GENE-070202-6]
68. rpgrb ENSDARG00000057074 117 1.534 - 0.772 - - - 0.762 - - - retinitis pigmentosa GTPase regulator b [Source:ZFIN;Acc:ZDB-GENE-081015-2]
69. CDH8 172 1.533 - - - - - 0.708 0.825 - - cadherin 8
70. hnrnpa3 ENSDARG00000059351 453 1.527 - - - 0.751 - - - 0.776 - heterogeneous nuclear ribonucleoprotein A3 [Source:ZFIN;Acc:ZDB-GENE-060224-1]
71. swt1 ENSDARG00000094010 472 1.525 - 0.753 - - - - 0.772 - - SWT1 RNA endoribonuclease homolog [Source:ZFIN;Acc:ZDB-GENE-041015-373]
72. NUP54 ENSDARG00000103296 433 1.523 - - - - - 0.777 - 0.746 - nucleoporin 54 [Source:ZFIN;Acc:ZDB-GENE-040426-2263]
73. CDC42BPA CDC42BPA 295 1.517 - 0.701 - - - 0.816 - - -
74. gnsa ENSDARG00000023766 545 1.516 - - - - - 0.787 - 0.729 - glucosamine (N-acetyl)-6-sulfatase a [Source:ZFIN;Acc:ZDB-GENE-050107-5]
75. CRTC2 ENSDARG00000074910 297 1.515 - 0.713 - - - 0.802 - - - CREB regulated transcription coactivator 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2214]
76. rgs3a ENSDARG00000099746 727 1.508 - - - - - 0.740 0.768 - - regulator of G protein signaling 3a [Source:ZFIN;Acc:ZDB-GENE-040801-150]
77. chmp3 ENSDARG00000038064 577 1.508 - - - 0.718 - 0.790 - - - charged multivesicular body protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2600]
78. efhc1 ENSDARG00000009743 113 1.504 - 0.712 - 0.792 - - - - - EF-hand domain (C-terminal) containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1300]
79. oafa ENSDARG00000075851 2015 1.503 - - - - 0.725 - - 0.778 - OAF homolog a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-090917-1]
80. stox2a ENSDARG00000070162 1620 1.491 - 0.715 - - - 0.776 - - - storkhead box 2a [Source:ZFIN;Acc:ZDB-GENE-090313-101]
81. si:dkey-38p12.2 si:dkey-38p12.2 504 1.483 - - - 0.781 - 0.702 - - -
82. arid1ab ENSDARG00000101891 1722 1.48 - - - - - 0.774 - 0.706 - AT rich interactive domain 1Ab (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-030131-5725]
83. BX004880.1 BX004880.1 638 1.479 - - - 0.747 - 0.732 - - -
84. smtla ENSDARG00000038191 42 1.476 - 0.771 - - - - 0.705 - - somatolactin alpha [Source:ZFIN;Acc:ZDB-GENE-060123-2]
85. dnajc6 ENSDARG00000079891 438 1.475 - 0.729 - - - 0.746 - - - DnaJ (Hsp40) homolog, subfamily C, member 6 [Source:ZFIN;Acc:ZDB-GENE-080104-2]
86. CAMK2G CAMK2G 3537 1.473 - 0.735 - - - 0.738 - - -
87. doc2d ENSDARG00000079962 76 1.466 - 0.729 - - - 0.737 - - - double C2-like domains, delta [Source:ZFIN;Acc:ZDB-GENE-081104-451]
88. TSC22D1 ENSDARG00000038306 517 1.466 0.710 0.756 - - - - - - - TSC22 domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7785]
89. depdc1a ENSDARG00000018165, ENSDARG00000114097 1958 1.445 - - - - - 0.720 - 0.725 - DEP domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9827]
90. arhgap29b ENSDARG00000017748 812 1.444 - 0.731 - - - - 0.713 - - Rho GTPase activating protein 29b [Source:ZFIN;Acc:ZDB-GENE-031010-44]
91. FOXN2 FOXN2 118 1.439 - 0.731 - - - 0.708 - - -
92. znf277 ENSDARG00000025346, ENSDARG00000113592 288 0.991 - - - - - - - 0.991 - zinc finger protein 277 [Source:ZFIN;Acc:ZDB-GENE-040426-1633]
93. BX927282.2 ENSDARG00000096925 221 0.986 - - - - - - - 0.986 -
94. JAKMIP3 ENSDARG00000100708 56 0.958 - - - - - - - 0.958 - Janus kinase and microtubule interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-100914-6]
95. sv2ba ENSDARG00000057427 33 0.958 - - - - - - - 0.958 - synaptic vesicle glycoprotein 2Ba [Source:ZFIN;Acc:ZDB-GENE-070209-134]
96. si:ch211-67e16.2 41 0.958 - - - - - - - 0.958 - si:ch211-67e16.2, transcript variant X2
97. CR848836.5 CR848836.5 42 0.958 - - - - - - - 0.958 -
98. si:dkey-29n10.3 si:dkey-29n10.3 66 0.958 - - - - - - - 0.958 -
99. si:ch73-67c22.3 si:ch73-67c22.3 30 0.958 - - - - - - - 0.958 -
100. si:ch211-106h4.9 ENSDARG00000075706 36 0.958 - - - - - - - 0.958 - si:ch211-106h4.9 [Source:ZFIN;Acc:ZDB-GENE-070705-17]

There are 2023 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA