Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rpe65a

Gene Name Gene ID Reads Annotation
rpe65a ENSDARG00000007480 52 retinal pigment epithelium-specific protein 65a [Source:ZFIN;Acc:ZDB-GENE-040426-1717]










Genes with expression patterns similar to rpe65a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rpe65a ENSDARG00000007480 52 5 - - 1.000 1.000 1.000 - - 1.000 1.000 retinal pigment epithelium-specific protein 65a [Source:ZFIN;Acc:ZDB-GENE-040426-1717]
2. RCVRN_1 RCVRN_1 46 3.624 - - 0.749 0.964 0.954 - - - 0.957
3. guca1g ENSDARG00000045737, ENSDARG00000114717 22 3.594 - - 0.749 0.906 0.963 - - - 0.976 guanylate cyclase activator 1g [Source:ZFIN;Acc:ZDB-GENE-050120-1]
4. gngt1 ENSDARG00000035798, ENSDARG00000116914 255 3.501 - - 0.749 0.864 0.922 - - - 0.966 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7596]
5. ETV3L ETV3L 67 3.395 - - 0.749 0.730 0.955 - - - 0.961
6. arr3a ENSDARG00000056511, ENSDARG00000114648 192 2.742 - - - 0.969 0.796 - - - 0.977 arrestin 3a, retinal (X-arrestin) [Source:ZFIN;Acc:ZDB-GENE-040718-102]
7. UNC119 UNC119 104 2.685 - - 0.749 - 0.963 - - - 0.973
8. si:ch211-133l5.5 si:ch211-133l5.5 123 2.639 - - 0.749 0.919 - - - - 0.971
9. guk1b ENSDARG00000005776 23 2.624 - - 0.749 - 0.963 - - - 0.912 guanylate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-020916-1]
10. syt5b ENSDARG00000011640 70 2.604 - - 0.730 - 0.929 - - - 0.945 synaptotagmin Vb [Source:ZFIN;Acc:ZDB-GENE-050522-134]
11. stxbp1b ENSDARG00000056036, ENSDARG00000112938 84 2.594 - - 0.789 - 0.932 - - - 0.873 syntaxin binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-060531-166]
12. zgc:109965 ENSDARG00000012126 11 2.541 - - 0.749 0.829 0.963 - - - - zgc:109965 [Source:ZFIN;Acc:ZDB-GENE-050913-21]
13. nr2e3 ENSDARG00000045904, ENSDARG00000113178 208 2.405 - - 0.749 0.728 0.928 - - - - nuclear receptor subfamily 2, group E, member 3 [Source:ZFIN;Acc:ZDB-GENE-041114-63]
14. sagb ENSDARG00000038378 28 1.929 - - - - 0.963 - - - 0.966 S-antigen; retina and pineal gland (arrestin) b [Source:ZFIN;Acc:ZDB-GENE-050913-98]
15. grk7a ENSDARG00000020602 10 1.918 - - - 0.945 - - - - 0.973 G protein-coupled receptor kinase 7a [Source:ZFIN;Acc:ZDB-GENE-050824-1]
16. saga ENSDARG00000012610 63 1.846 - - - 0.905 - - - - 0.941 S-antigen; retina and pineal gland (arrestin) a [Source:ZFIN;Acc:ZDB-GENE-040426-1538]
17. rlbp1b ENSDARG00000045808, ENSDARG00000109856 282 1.836 - - - 0.894 - - - - 0.942 retinaldehyde binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1870]
18. slc6a2 ENSDARG00000016141 49 1.833 - - - - 0.887 - - - 0.946 solute carrier family 6 (neurotransmitter transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-110408-4]
19. rs1 rs1 70 1.817 - - - - 0.890 - - - 0.927
20. gnb3b ENSDARG00000002696 46 1.745 - - - 0.768 - - - - 0.977 guanine nucleotide binding protein (G protein), beta polypeptide 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2280]
21. rcvrna ENSDARG00000052223, ENSDARG00000113117 20 1.715 - - - 0.786 - - - - 0.929 recoverin a [Source:ZFIN;Acc:ZDB-GENE-050913-106]
22. CSF3 CSF3 4 1.715 - - - 0.752 0.963 - - - -
23. tfap2d ENSDARG00000023272 308 1.714 - - - 0.829 0.885 - - - - transcription factor AP-2 delta (activating enhancer binding protein 2 delta) [Source:ZFIN;Acc:ZDB-GENE-050913-99]
24. gnb3a ENSDARG00000004358, ENSDARG00000113470 11 1.706 - - 0.749 - - - - - 0.957 guanine nucleotide binding protein (G protein), beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040718-134]
25. crx ENSDARG00000011989, ENSDARG00000113850 330 1.702 - - 0.749 0.953 - - - - - cone-rod homeobox [Source:ZFIN;Acc:ZDB-GENE-010403-1]
26. CABZ01068819.1 CABZ01068819.1 20 1.701 - - 0.749 - - - - - 0.952
27. gnat1 ENSDARG00000044199 251 1.698 - - 0.749 - 0.949 - - - - guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-011128-11]
28. gnat2 ENSDARG00000042529 112 1.688 - - 0.749 - - - - - 0.939 guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-011128-10]
29. fam131c ENSDARG00000037320 6 1.656 - - - 0.766 0.890 - - - - family with sequence similarity 131, member C [Source:ZFIN;Acc:ZDB-GENE-050706-119]
30. TULP1 TULP1 50 1.651 - - - 0.720 - - - - 0.931
31. opn1lw2 ENSDARG00000044861, ENSDARG00000115709 277 1.651 - - - - 0.703 - - - 0.948 opsin 1 (cone pigments), long-wave-sensitive, 2 [Source:ZFIN;Acc:ZDB-GENE-040718-141]
32. flh flh 47 1.641 - - 0.732 0.909 - - - - -
33. si:ch211-260o22.1 si:ch211-260o22.1 34 1.618 - - 0.758 - 0.860 - - - -
34. CUL9 2 1.469 - - - 0.766 0.703 - - - - cullin 9
35. si:dkey-94e7.2 ENSDARG00000068474 14 1.458 - - - 0.718 - - - 0.740 - si:dkey-94e7.2 [Source:ZFIN;Acc:ZDB-GENE-070912-611]
36. vmhc 234 1.437 - - 0.715 - 0.722 - - - - ventricular myosin heavy chain
37. dicp1.1 ENSDARG00000091993, ENSDARG00000111013, ENSDARG00000114814 2 1.43 - - - 0.726 - - - 0.704 - diverse immunoglobulin domain-containing protein 1.1 [Source:ZFIN;Acc:ZDB-GENE-120305-1]
38. gngt2b ENSDARG00000103543 132 0.972 - - - - - - - - 0.972 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2b [Source:ZFIN;Acc:ZDB-GENE-091020-4]
39. CU459152.1 CU459152.1 407 0.969 - - - - - - - - 0.969
40. zgc:158856 zgc:158856 23 0.969 - - - - - - - - 0.969
41. si:dkeyp-35e5.5 ENSDARG00000104026 3 0.963 - - - - 0.963 - - - - si:dkeyp-35e5.5 [Source:ZFIN;Acc:ZDB-GENE-050420-335]
42. glis1b ENSDARG00000027933 14 0.963 - - - - 0.963 - - - - GLIS family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-081105-172]
43. Mar-11 Mar-11 5 0.963 - - - - 0.963 - - - -
44. trim108 ENSDARG00000061762, ENSDARG00000114698 5 0.963 - - - - 0.963 - - - - tripartite motif containing 108 [Source:ZFIN;Acc:ZDB-GENE-060503-670]
45. hp ENSDARG00000051890, ENSDARG00000095807 4 0.963 - - - - 0.963 - - - - haptoglobin [Source:ZFIN;Acc:ZDB-GENE-030131-1259]
46. CMA1_6 CMA1_6 2 0.963 - - - - 0.963 - - - -
47. pcdh2g16 1 0.963 - - - - 0.963 - - - - protocadherin 2 gamma 16
48. si:dkey-231k6.6 si:dkey-231k6.6 2 0.963 - - - - 0.963 - - - -
49. CABZ01029902.1 CABZ01029902.1 0 0.963 - - - - 0.963 - - - -
50. Vault_1 Vault_1 6 0.963 - - - - 0.963 - - - -
51. zgc:171887 ENSDARG00000058791 0 0.963 - - - - 0.963 - - - - zgc:171887 [Source:ZFIN;Acc:ZDB-GENE-080220-39]
52. si:dkey-206f10.5 si:dkey-206f10.5 1 0.963 - - - - 0.963 - - - -
53. CABZ01058422.1 CABZ01058422.1 0 0.963 - - - - 0.963 - - - -
54. pth2 ENSDARG00000022951 7 0.963 - - - - 0.963 - - - - parathyroid hormone 2 [Source:ZFIN;Acc:ZDB-GENE-041102-1]
55. wee1 ENSDARG00000093864, ENSDARG00000114333, ENSDARG00000115653 1 0.963 - - - - 0.963 - - - - WEE1 G2 checkpoint kinase [Source:ZFIN;Acc:ZDB-GENE-030131-5268]
56. AL929217.1 ENSDARG00000059891 1 0.963 - - - - 0.963 - - - - gamma-aminobutyric acid receptor subunit pi-like [Source:NCBI gene;Acc:562831]
57. CU695216.1 CU695216.1 0 0.963 - - - - 0.963 - - - -
58. CCDC96 ENSDARG00000035963 5 0.963 - - - - 0.963 - - - - coiled-coil domain containing 96 [Source:ZFIN;Acc:ZDB-GENE-081022-156]
59. si:ch211-113a14.14 si:ch211-113a14.14 3 0.963 - - - - 0.963 - - - -
60. fancl ENSDARG00000007885 0 0.963 - - - - 0.963 - - - - FA complementation group L [Source:ZFIN;Acc:ZDB-GENE-040426-1045]
61. SOX8 SOX8 22 0.963 - - - - 0.963 - - - -
62. BX294653.4 BX294653.4 1 0.963 - - - - 0.963 - - - -
63. si:dkeyp-68b7.6 si:dkeyp-68b7.6 7 0.963 - - - - 0.963 - - - -
64. CR749167.1 ENSDARG00000100165 38 0.963 - - - - 0.963 - - - -
65. DGKG ENSDARG00000062696 1 0.963 - - - - 0.963 - - - - diacylglycerol kinase, gamma [Source:ZFIN;Acc:ZDB-GENE-081105-39]
66. TRIM8 TRIM8 5 0.963 - - - - 0.963 - - - -
67. utrnp 0 0.963 - - - - 0.963 - - - - utrophin, pseudogene
68. fubp3 ENSDARG00000086896 21 0.963 - - - - 0.963 - - - - far upstream element (FUSE) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041121-12]
69. prelp ENSDARG00000070597 99 0.963 - - - - 0.963 - - - - proline/arginine-rich end leucine-rich repeat protein [Source:ZFIN;Acc:ZDB-GENE-080327-24]
70. BX119910.9 BX119910.9 7 0.963 - - - - 0.963 - - - -
71. si:dkey-222f2.6 si:dkey-222f2.6 1 0.963 - - - - 0.963 - - - -
72. ctssa ctssa 24 0.963 - - - - 0.963 - - - -
73. si:dkey-47k20.9 ENSDARG00000055920 0 0.963 - - - - 0.963 - - - - si:dkey-47k20.9 [Source:ZFIN;Acc:ZDB-GENE-060503-454]
74. zgc:172323 ENSDARG00000053201 1 0.963 - - - - 0.963 - - - - zgc:172323 [Source:ZFIN;Acc:ZDB-GENE-080204-113]
75. MFRP MFRP 6 0.963 - - - - 0.963 - - - -
76. CU326366.2 ENSDARG00000068593 11 0.963 - - - - 0.963 - - - -
77. si:ch211-149k23.4 si:ch211-149k23.4 0 0.963 - - - - 0.963 - - - -
78. CR556708.1 ENSDARG00000100565 6 0.963 - - - - 0.963 - - - - uncharacterized LOC110437832 [Source:NCBI gene;Acc:110437832]
79. si:dkeyp-98a7.5 0 0.963 - - - - 0.963 - - - - si:dkeyp-98a7.5
80. dpyda dpyda 12 0.963 - - - - 0.963 - - - -
81. CU929148.1 CU929148.1 0 0.963 - - - - 0.963 - - - -
82. slc9a3.2 ENSDARG00000036722 31 0.963 - - - - 0.963 - - - - solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060503-640]
83. zgc:92590 ENSDARG00000040282 13 0.963 - - - - 0.963 - - - - zgc:92590 [Source:ZFIN;Acc:ZDB-GENE-041024-15]
84. GUCY2C ENSDARG00000014320, ENSDARG00000116238 8 0.963 - - - - 0.963 - - - - guanylate cyclase 2C [Source:ZFIN;Acc:ZDB-GENE-091118-67]
85. si:dkey-246j6.2 si:dkey-246j6.2 0 0.963 - - - - 0.963 - - - -
86. htr5a htr5a 4 0.963 - - - - 0.963 - - - -
87. col5a2b ENSDARG00000024847 17 0.963 - - - - 0.963 - - - - collagen, type V, alpha 2b [Source:ZFIN;Acc:ZDB-GENE-110406-2]
88. ddr2b ENSDARG00000058695 7 0.963 - - - - 0.963 - - - - discoidin domain receptor tyrosine kinase 2b [Source:ZFIN;Acc:ZDB-GENE-060503-361]
89. olfcg5 ENSDARG00000102459 5 0.963 - - - - 0.963 - - - - olfactory receptor C family, g5 [Source:ZFIN;Acc:ZDB-GENE-060503-913]
90. igsf21b ENSDARG00000056084 6 0.963 - - - - 0.963 - - - - immunoglobin superfamily, member 21b [Source:ZFIN;Acc:ZDB-GENE-070424-59]
91. BX548067.4 BX548067.4 0 0.963 - - - - 0.963 - - - -
92. KRT9 KRT9 7 0.963 - - - - 0.963 - - - -
93. ttc25 ENSDARG00000058140 2 0.963 - - - - 0.963 - - - - tetratricopeptide repeat domain 25 [Source:ZFIN;Acc:ZDB-GENE-040426-995]
94. gabrr2b ENSDARG00000014057 9 0.963 - - - - 0.963 - - - - gamma-aminobutyric acid (GABA) A receptor, rho 2b [Source:ZFIN;Acc:ZDB-GENE-041014-174]
95. ptk2.2 ptk2.2 3 0.963 - - - - 0.963 - - - -
96. zgc:172131 ENSDARG00000076269 32 0.963 - - - - 0.963 - - - - zgc:172131 [Source:ZFIN;Acc:ZDB-GENE-080204-47]
97. CR356223.2_1 ENSDARG00000100655 1 0.963 - - - - 0.963 - - - -
98. si:dkey-172k15.6 ENSDARG00000095717 0 0.963 - - - - 0.963 - - - - si:dkey-172k15.6 [Source:ZFIN;Acc:ZDB-GENE-121214-9]
99. CT027754.1 CT027754.1 0 0.963 - - - - 0.963 - - - -
100. ENSDARG00000088389 ENSDARG00000088389 2 0.963 - - - - 0.963 - - - -

There are 669 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA