Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for col5a2b

Gene Name Gene ID Reads Annotation
col5a2b ENSDARG00000024847 17 collagen, type V, alpha 2b [Source:ZFIN;Acc:ZDB-GENE-110406-2]










Genes with expression patterns similar to col5a2b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. col5a2b ENSDARG00000024847 17 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 collagen, type V, alpha 2b [Source:ZFIN;Acc:ZDB-GENE-110406-2]
2. ifnlr1 ENSDARG00000087131 73 2.542 0.752 - - - - 1.000 - 0.790 - interferon lambda receptor 1 [Source:ZFIN;Acc:ZDB-GENE-071120-5]
3. zgc:153921 ENSDARG00000020738, ENSDARG00000038405 34 2 - - - - - 1.000 1.000 - - zgc:153921 [Source:ZFIN;Acc:ZDB-GENE-060929-816]
4. bbs1 ENSDARG00000075169, ENSDARG00000114301 7 2 - - - - 1.000 - 1.000 - - Bardet-Biedl syndrome 1 [Source:ZFIN;Acc:ZDB-GENE-060126-1]
5. hp ENSDARG00000051890, ENSDARG00000095807 4 2 - - - - 1.000 1.000 - - - haptoglobin [Source:ZFIN;Acc:ZDB-GENE-030131-1259]
6. BX294653.4 BX294653.4 1 2 - - - - 1.000 1.000 - - -
7. si:dkey-220o10.1 si:dkey-220o10.1 63 1.932 0.932 - - - - - 1.000 - -
8. TMC2 TMC2 5 1.905 - - - - 0.905 1.000 - - -
9. zgc:152951 ENSDARG00000068663, ENSDARG00000113135 22 1.879 1.000 - - - - 0.879 - - - zgc:152951 [Source:ZFIN;Acc:ZDB-GENE-060929-416]
10. GPR139 14 1.859 1.000 - - - - 0.859 - - - G protein-coupled receptor 139, transcript variant X1
11. agtr1b ENSDARG00000045443 232 1.826 - - - - - 0.826 1.000 - - angiotensin II receptor, type 1b [Source:ZFIN;Acc:ZDB-GENE-110411-117]
12. BX547934.1 ENSDARG00000097061 35 1.781 - - - - 0.781 - 1.000 - -
13. kcnq2a ENSDARG00000075307 7 1.772 - - - - - 1.000 - - 0.772 potassium voltage-gated channel, KQT-like subfamily, member 2a [Source:ZFIN;Acc:ZDB-GENE-080220-37]
14. cpdb ENSDARG00000053877 5 1.743 - - - - 1.000 - - 0.743 - carboxypeptidase D, b [Source:ZFIN;Acc:ZDB-GENE-060929-1270]
15. apex2 ENSDARG00000008472 39 1.743 - - - - - 1.000 0.743 - - APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Source:ZFIN;Acc:ZDB-GENE-040426-835]
16. bcl3 ENSDARG00000087832 69 1.727 - - - - - 0.859 0.868 - - B cell CLL/lymphoma 3 [Source:ZFIN;Acc:ZDB-GENE-061013-1]
17. ccr6a ENSDARG00000087474 10 1.715 - - - 0.715 1.000 - - - - chemokine (C-C motif) receptor 6a [Source:ZFIN;Acc:ZDB-GENE-040625-126]
18. C9HXorf36 C9HXorf36 44 1.711 - - 0.929 - - 0.782 - - -
19. fam45a ENSDARG00000062965, ENSDARG00000115900 14 1.71 - - - - - 0.710 1.000 - - family with sequence similarity 45, member A [Source:ZFIN;Acc:ZDB-GENE-030131-3548]
20. IKZF4 ENSDARG00000037068 36 1.66 - - - - 0.818 - 0.842 - - IKAROS family zinc finger 4 [Source:ZFIN;Acc:ZDB-GENE-180319-1]
21. BX664752.1 BX664752.1 64 1.644 - - - - - 0.879 - 0.765 -
22. BX322605.2 BX322605.2 75 1.638 - - - - - - 0.842 0.796 -
23. CELA1_1 CELA1_1 104 1.617 0.852 - - - - - 0.765 - -
24. he1a 48624 1.533 0.721 - - - - 0.812 - - - hatching enzyme 1a, transcript variant X1
25. xrra1 ENSDARG00000089578 18 1.509 - - - - - - - 0.799 0.710 X-ray radiation resistance associated 1 [Source:ZFIN;Acc:ZDB-GENE-101216-2]
26. prkaa2 ENSDARG00000060641 12 1.497 - - 0.729 - - 0.768 - - - protein kinase, AMP-activated, alpha 2 catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-081120-5]
27. ungb ENSDARG00000094922 16 1 - - - - - 1.000 - - - uracil DNA glycosylase b [Source:ZFIN;Acc:ZDB-GENE-070705-360]
28. CABZ01038521.1 ENSDARG00000087306 10 1 1.000 - - - - - - - -
29. U1_16 U1_16 0 1 - - - - 1.000 - - - -
30. ARHGEF38 ENSDARG00000079377 9 1 - - - - - - 1.000 - - Rho guanine nucleotide exchange factor (GEF) 38 [Source:ZFIN;Acc:ZDB-GENE-090313-83]
31. ugt5f1 ENSDARG00000054835 2 1 - - - - - - 1.000 - - UDP glucuronosyltransferase 5 family, polypeptide F1 [Source:ZFIN;Acc:ZDB-GENE-100406-6]
32. BX842593.1 BX842593.1 0 1 - - - - 1.000 - - - -
33. ENSDARG00000089152 ENSDARG00000089152 12 1 - - - - - 1.000 - - -
34. si:ch73-27e22.3 ENSDARG00000077263 10 1 - - - - - 1.000 - - - si:ch73-27e22.3 [Source:ZFIN;Acc:ZDB-GENE-070705-231]
35. si:ch211-198c19.1 ENSDARG00000089333 3 1 - - - - - 1.000 - - - si:ch211-198c19.1 [Source:ZFIN;Acc:ZDB-GENE-100922-218]
36. ralgps1 ENSDARG00000068370 39 1 - - - - - - 1.000 - - Ral GEF with PH domain and SH3 binding motif 1 [Source:ZFIN;Acc:ZDB-GENE-070720-16]
37. si:dkey-14o18.1 si:dkey-14o18.1 108 1 - - - - - 1.000 - - -
38. scpp5 ENSDARG00000078622 15 1 1.000 - - - - - - - - secretory calcium-binding phosphoprotein 5 [Source:ZFIN;Acc:ZDB-GENE-090313-256]
39. hoxc12b ENSDARG00000103133 1290 1 - - - - - - 1.000 - - homeobox C12b [Source:ZFIN;Acc:ZDB-GENE-000329-17]
40. wu:fa26c03 18714 1 - - - - - 1.000 - - - wu:fa26c03
41. edn3b ENSDARG00000086669 8 1 - - - - 1.000 - - - - endothelin 3b [Source:ZFIN;Acc:ZDB-GENE-090313-235]
42. vcpip1 ENSDARG00000060177 56 1 - - - - - 1.000 - - - valosin containing protein (p97)/p47 complex interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-070912-613]
43. si:dkey-22i16.7 ENSDARG00000094910 47 1 - - - - - - 1.000 - - si:dkey-22i16.7 [Source:ZFIN;Acc:ZDB-GENE-090313-259]
44. U1_54 U1_54 0 1 - - - - - 1.000 - - -
45. gtf2f2b ENSDARG00000006816 1 1 - - - - 1.000 - - - - general transcription factor IIF, polypeptide 2b [Source:ZFIN;Acc:ZDB-GENE-050417-374]
46. U6_10 U6_10 0 1 - - - - 1.000 - - - -
47. dapk1 ENSDARG00000060093 351 1 1.000 - - - - - - - - death-associated protein kinase 1 [Source:ZFIN;Acc:ZDB-GENE-060526-177]
48. ldb2a ENSDARG00000019579 26 1 - - - - - - 1.000 - - LIM domain binding 2a [Source:ZFIN;Acc:ZDB-GENE-990415-136]
49. fbxo36a ENSDARG00000010662, ENSDARG00000109843 13 1 - - - - - 1.000 - - - F-box protein 36a [Source:ZFIN;Acc:ZDB-GENE-060929-986]
50. si:ch211-86k6.3 si:ch211-86k6.3 1 1 - - - - 1.000 - - - -
51. PTPDC1_1 PTPDC1_1 12 1 - - - - - - 1.000 - -
52. gcnt4b ENSDARG00000077550 2 1 - - - - - 1.000 - - - glucosaminyl (N-acetyl) transferase 4, core 2, b [Source:ZFIN;Acc:ZDB-GENE-091118-69]
53. CUZD1_3 CUZD1_3 9 1 - - - - - - 1.000 - -
54. si:ch73-299h12.1_1 ENSDARG00000102321 8 1 - - - - - - 1.000 - - si:ch73-299h12.1 [Source:ZFIN;Acc:ZDB-GENE-081031-84]
55. si:ch211-202h22.9 ENSDARG00000079980 2 1 - - - - 1.000 - - - - si:ch211-202h22.9 [Source:ZFIN;Acc:ZDB-GENE-030131-1143]
56. EGFR_1 EGFR_1 2 1 - - - - - 1.000 - - -
57. slc5a5 ENSDARG00000005392 6 1 - - - - 1.000 - - - - solute carrier family 5 (sodium/iodide cotransporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060503-585]
58. IQCK ENSDARG00000076831, ENSDARG00000112508 6 1 - - - - - - 1.000 - - IQ motif containing K [Source:ZFIN;Acc:ZDB-GENE-081022-109]
59. rgs9b ENSDARG00000045156, ENSDARG00000111650 77 1 1.000 - - - - - - - - regulator of G protein signaling 9b [Source:ZFIN;Acc:ZDB-GENE-040426-1708]
60. CABZ01030889.1 CABZ01030889.1 4 1 - - - - 1.000 - - - -
61. esyt1b ENSDARG00000014239 8 1 - - - - - 1.000 - - - extended synaptotagmin-like protein 1b [Source:ZFIN;Acc:ZDB-GENE-040724-209]
62. si:ch211-171h4.5 ENSDARG00000077337 3 1 - - - - 1.000 - - - - si:ch211-171h4.5 [Source:ZFIN;Acc:ZDB-GENE-081104-151]
63. CABZ01074081.1 CABZ01074081.1 109 1 1.000 - - - - - - - -
64. SLC5A10 ENSDARG00000074212 11 1 - - - - - - 1.000 - - solute carrier family 5 member 10 [Source:HGNC Symbol;Acc:HGNC:23155]
65. emilin3a ENSDARG00000078052 1652 1 - - - - - - 1.000 - - elastin microfibril interfacer 3a [Source:ZFIN;Acc:ZDB-GENE-080612-2]
66. si:ch211-149k23.10 si:ch211-149k23.10 10 1 - - - - 1.000 - - - -
67. batf ENSDARG00000011818 2 1 - - - - - - 1.000 - - basic leucine zipper transcription factor, ATF-like [Source:ZFIN;Acc:ZDB-GENE-041014-291]
68. si:dkeyp-87d1.6 si:dkeyp-87d1.6 0 1 - - - - - 1.000 - - -
69. adrb1 ENSDARG00000007490, ENSDARG00000115574 9 1 - - - - - - 1.000 - - adrenoceptor beta 1 [Source:ZFIN;Acc:ZDB-GENE-081022-145]
70. cbx7b ENSDARG00000087181 5 1 - - - - - 1.000 - - - chromobox homolog 7b [Source:ZFIN;Acc:ZDB-GENE-110613-2]
71. ccdc24 ENSDARG00000038793 7 1 - - - - 1.000 - - - - coiled-coil domain containing 24 [Source:ZFIN;Acc:ZDB-GENE-050327-18]
72. C11H1orf116 C11H1orf116 9 1 - - - - - - 1.000 - -
73. ENSDARG00000037617 ENSDARG00000037617 1 1 - - - - 1.000 - - - -
74. SNORD15 SNORD15 0 1 - - - - 1.000 - - - -
75. CR388160.3 CR388160.3 0 1 - - - - 1.000 - - - -
76. ENSDARG00000032477 ENSDARG00000032477 18 1 - - - - - - 1.000 - -
77. si:dkey-43b14.6 si:dkey-43b14.6 20 1 - - - - - 1.000 - - -
78. tmem54 tmem54 3 1 - - - - 1.000 - - - -
79. si:ch1073-185p12.2 ENSDARG00000100199 7 1 - - - - - 1.000 - - - si:ch1073-185p12.2 [Source:ZFIN;Acc:ZDB-GENE-110411-196]
80. cacng5a ENSDARG00000003326 17 1 1.000 - - - - - - - - calcium channel, voltage-dependent, gamma subunit 5a [Source:ZFIN;Acc:ZDB-GENE-120104-4]
81. SH3TC1 ENSDARG00000077330 8 1 - - - - 1.000 - - - - SH3 domain and tetratricopeptide repeats 1 [Source:HGNC Symbol;Acc:HGNC:26009]
82. fgfr1b ENSDARG00000011190 10 1 - - - - 1.000 - - - - fibroblast growth factor receptor 1b [Source:ZFIN;Acc:ZDB-GENE-060503-14]
83. si:dkey-111k7.3 si:dkey-111k7.3 0 1 - - - - 1.000 - - - -
84. hbaa2 ENSDARG00000069735 10 1 - - - - - 1.000 - - - hemoglobin, alpha adult 2 [Source:ZFIN;Acc:ZDB-GENE-081104-38]
85. GPC6_1 GPC6_1 34 1 - - - - 1.000 - - - -
86. si:ch211-145h19.1 31 1 - - - - - 1.000 - - - si:ch211-145h19.1
87. CR381673.3 CR381673.3 4 1 - - - - 1.000 - - - -
88. KIF21A ENSDARG00000061131 65 1 - - - - - - 1.000 - - kinesin family member 21A [Source:ZFIN;Acc:ZDB-GENE-110411-237]
89. BX324132.5 BX324132.5 115 1 - - - - - - 1.000 - -
90. si:ch211-81a5.8 ENSDARG00000070972 59 1 - - - - - - 1.000 - - si:ch211-81a5.8 [Source:ZFIN;Acc:ZDB-GENE-060503-138]
91. Telomerase-vert Telomerase-vert 8 1 - - - - 1.000 - - - -
92. si:dkey-118j18.3 si:dkey-118j18.3 4 1 - - - - - 1.000 - - -
93. si:ch73-15n24.1 ENSDARG00000079901 0 1 - - - - - - 1.000 - - si:ch73-15n24.1 [Source:ZFIN;Acc:ZDB-GENE-030131-1323]
94. Metazoa_SRP_5 Metazoa_SRP_5 2 1 - - - - 1.000 - - - -
95. CABZ01087025.1 ENSDARG00000117232 10 1 - - - - - - 1.000 - -
96. cd247l ENSDARG00000077240 25 1 - - - - 1.000 - - - - CD247 antigen like [Source:ZFIN;Acc:ZDB-GENE-070508-2]
97. BSN_2 BSN_2 1 1 - - - - - - 1.000 - -
98. guk1b ENSDARG00000005776 23 1 - - - - 1.000 - - - - guanylate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-020916-1]
99. si:ch73-381a20.2 si:ch73-381a20.2 11 1 - - - - - 1.000 - - -
100. oacyl ENSDARG00000075191 351 1 - - - - 1.000 - - - - O-acyltransferase like [Source:ZFIN;Acc:ZDB-GENE-090710-2]

There are 976 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA