Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rin1a

Gene Name Gene ID Reads Annotation
rin1a ENSDARG00000079095 99 Ras and Rab interactor 1a [Source:ZFIN;Acc:ZDB-GENE-091204-129]










Genes with expression patterns similar to rin1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rin1a ENSDARG00000079095 99 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Ras and Rab interactor 1a [Source:ZFIN;Acc:ZDB-GENE-091204-129]
2. msxa msxa 263 1.818 - - - - - 0.910 0.908 - -
3. CABZ01048956.1 ENSDARG00000117474 253 1.748 - 0.921 - - - - 0.827 - - probable GPI-anchored adhesin-like protein PGA18 [Source:NCBI gene;Acc:108191751]
4. RPS6KA5 ENSDARG00000060551 109 1.707 - - - - - 0.833 0.874 - - ribosomal protein S6 kinase, polypeptide 5 [Source:ZFIN;Acc:ZDB-GENE-130530-693]
5. HIST2H4A HIST2H4A 33 1.706 - 0.732 - - - - 0.974 - -
6. C2CD3 ENSDARG00000074137 51 1.67 - 0.797 - - - 0.873 - - - C2 calcium-dependent domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-060503-104]
7. mitd1 ENSDARG00000044766 182 1.669 - 0.768 - - - - 0.901 - - MIT, microtubule interacting and transport, domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-923]
8. mrps22 ENSDARG00000018073, ENSDARG00000115927 177 1.661 - - - - - 0.737 0.924 - - mitochondrial ribosomal protein S22 [Source:ZFIN;Acc:ZDB-GENE-070615-31]
9. PLLP ENSDARG00000062756, ENSDARG00000109949 114 1.638 - 0.819 - - - - 0.819 - - plasmolipin [Source:ZFIN;Acc:ZDB-GENE-050419-195]
10. SYTL1 ENSDARG00000070094 282 1.631 - - - - - 0.890 0.741 - - synaptotagmin-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-439]
11. CU104716.1 ENSDARG00000109332 12 1.629 - 0.719 - - - 0.910 - - -
12. nadka_1 ENSDARG00000006577, ENSDARG00000098313 544 1.625 - - - - - 0.768 0.857 - - NAD kinase a [Source:ZFIN;Acc:ZDB-GENE-050417-39]
13. FJX1 ENSDARG00000035873 22 1.595 - 0.773 - - - 0.822 - - - four jointed box 1 [Source:ZFIN;Acc:ZDB-GENE-100422-10]
14. tlk2 ENSDARG00000010779, ENSDARG00000112127 751 1.566 - - - - - 0.818 0.748 - - tousled-like kinase 2 [Source:ZFIN;Acc:ZDB-GENE-060623-36]
15. ZDHHC20 ZDHHC20 366 1.562 - - - - - 0.795 0.767 - -
16. mmp9 ENSDARG00000042816 298 1.561 - 0.747 - - - 0.814 - - - matrix metallopeptidase 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2132]
17. psmf1 ENSDARG00000022652 527 1.558 - 0.746 - - - 0.812 - - - proteasome inhibitor subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040718-282]
18. CT485993.2 CT485993.2 1419 1.557 - - - - - 0.791 0.766 - -
19. carf ENSDARG00000019950 303 1.535 - 0.762 - - - - 0.773 - - calcium responsive transcription factor [Source:ZFIN;Acc:ZDB-GENE-070912-172]
20. trim8a ENSDARG00000090512 228 1.526 - - - - - 0.724 0.802 - - tripartite motif containing 8a [Source:ZFIN;Acc:ZDB-GENE-130107-1]
21. mettl22 ENSDARG00000077863 81 1.525 - 0.791 - - - - 0.734 - - methyltransferase like 22 [Source:ZFIN;Acc:ZDB-GENE-081022-70]
22. usp54a ENSDARG00000077948, ENSDARG00000112037 406 1.514 - - - - - 0.733 0.781 - - ubiquitin specific peptidase 54a [Source:ZFIN;Acc:ZDB-GENE-090828-2]
23. pygl ENSDARG00000002197 192 1.508 - 0.785 - - - 0.723 - - - phosphorylase, glycogen, liver [Source:ZFIN;Acc:ZDB-GENE-041205-1]
24. ZFAT ENSDARG00000077987 205 1.477 - - - - - 0.761 0.716 - - zinc finger and AT hook domain containing [Source:ZFIN;Acc:ZDB-GENE-130204-2]
25. zgc:101663 ENSDARG00000037852 830 1.457 - - - - - 0.754 0.703 - - zgc:101663 [Source:ZFIN;Acc:ZDB-GENE-041114-149]
26. CU929175.1 CU929175.1 200 1.455 - 0.732 - - - - 0.723 - -
27. slc6a13l 121 1.451 - - - - - 0.740 0.711 - - solute carrier family 6 (neurotransmitter transporter, GABA), member 13 like, transcript variant X2
28. si:ch211-179l5.6 si:ch211-179l5.6 33 0.992 - 0.992 - - - - - - -
29. ptk2ba ENSDARG00000022841 19 0.992 - 0.992 - - - - - - - protein tyrosine kinase 2 beta, a [Source:ZFIN;Acc:ZDB-GENE-080207-1]
30. crtac1a ENSDARG00000059826 22 0.986 - - - - - - 0.986 - - cartilage acidic protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9704]
31. slc30a10 ENSDARG00000103983 46 0.98 - - - - - - 0.980 - - solute carrier family 30, member 10 [Source:ZFIN;Acc:ZDB-GENE-060608-2]
32. vipr1b ENSDARG00000059058 62 0.979 - 0.979 - - - - - - - vasoactive intestinal peptide receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050311-6]
33. hivep3b ENSDARG00000037154 114 0.978 - - - - - - 0.978 - - human immunodeficiency virus type I enhancer binding protein 3b [Source:ZFIN;Acc:ZDB-GENE-100922-42]
34. cdk10 ENSDARG00000034256 166 0.975 - - - - - - 0.975 - - cyclin-dependent kinase 10 [Source:ZFIN;Acc:ZDB-GENE-050417-94]
35. si:ch211-106g4.2 si:ch211-106g4.2 6 0.974 - - - - - - 0.974 - -
36. MARS2 ENSDARG00000009218, ENSDARG00000109472, ENSDARG00000114406 47 0.974 - - - - - - 0.974 - - methionyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-111201-1]
37. saga ENSDARG00000012610 63 0.974 - - - - - - 0.974 - - S-antigen; retina and pineal gland (arrestin) a [Source:ZFIN;Acc:ZDB-GENE-040426-1538]
38. mxtx1 ENSDARG00000069382 32 0.974 - - - - - - 0.974 - - mix-type homeobox gene 1 [Source:ZFIN;Acc:ZDB-GENE-000710-7]
39. tmem187 ENSDARG00000051989 136 0.974 - - - - - - 0.974 - - transmembrane protein 187 [Source:ZFIN;Acc:ZDB-GENE-090313-366]
40. si:ch211-38m6.6 ENSDARG00000076959 12 0.974 - - - - - - 0.974 - - si:ch211-38m6.6 [Source:ZFIN;Acc:ZDB-GENE-070705-179]
41. CABZ01058107.1 ENSDARG00000112826 8 0.974 - - - - - - 0.974 - - C-type lectin domain family 4 member M-like [Source:NCBI gene;Acc:110440085]
42. KCNK7 ENSDARG00000057331 5 0.974 - - - - - - 0.974 - - potassium channel, subfamily K, member 7 [Source:ZFIN;Acc:ZDB-GENE-110304-2]
43. ftr56 ENSDARG00000030954 23 0.974 - - - - - - 0.974 - - finTRIM family, member 56 [Source:ZFIN;Acc:ZDB-GENE-030131-2801]
44. si:ch211-110p13.9 ENSDARG00000093821 82 0.971 - - - - - - 0.971 - - si:ch211-110p13.9 [Source:ZFIN;Acc:ZDB-GENE-060526-9]
45. si:ch211-193e13.5 ENSDARG00000052656 61 0.971 - - - - - - 0.971 - - si:ch211-193e13.5 [Source:ZFIN;Acc:ZDB-GENE-081104-158]
46. ADM ADM 122 0.971 - 0.971 - - - - - - -
47. zgc:162297 ENSDARG00000100912, ENSDARG00000114809 12 0.971 - - - - - - 0.971 - - zgc:162297 [Source:ZFIN;Acc:ZDB-GENE-070410-62]
48. LYAR ENSDARG00000098507 1506 0.97 - - - - - - 0.970 - - Ly1 antibody reactive homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-040426-1414]
49. myo3a ENSDARG00000010186 117 0.97 - - - - - - 0.970 - - myosin IIIA [Source:ZFIN;Acc:ZDB-GENE-041026-4]
50. NFKBIB ENSDARG00000030087, ENSDARG00000109444 306 0.969 - - - - - - 0.969 - - nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta [Source:ZFIN;Acc:ZDB-GENE-070705-529]
51. tbcela ENSDARG00000002682 1179 0.969 - - - - - - 0.969 - - tubulin folding cofactor E-like a [Source:ZFIN;Acc:ZDB-GENE-040426-1719]
52. si:dkey-182i3.9 ENSDARG00000096575 56 0.969 - - - - - - 0.969 - - si:dkey-182i3.9 [Source:ZFIN;Acc:ZDB-GENE-121214-310]
53. ITPK1 ITPK1 78 0.968 - - - - - - 0.968 - -
54. DGKE ENSDARG00000104793, ENSDARG00000113394, ENSDARG00000114662 45 0.968 - - - - - - 0.968 - - diacylglycerol kinase, epsilon [Source:ZFIN;Acc:ZDB-GENE-090512-7]
55. kif19 ENSDARG00000053026 124 0.967 - 0.967 - - - - - - - kinesin family member 19 [Source:ZFIN;Acc:ZDB-GENE-080215-2]
56. ITGA2 ITGA2 40 0.967 - - - - - - 0.967 - -
57. FAM188B FAM188B 145 0.966 - - - - - - 0.966 - -
58. si:ch211-74m13.3 ENSDARG00000076144 55 0.965 - - - - - - 0.965 - - si:ch211-74m13.3 [Source:ZFIN;Acc:ZDB-GENE-060503-219]
59. gnptg ENSDARG00000038566 259 0.965 - - - - - - 0.965 - - N-acetylglucosamine-1-phosphate transferase subunit gamma [Source:ZFIN;Acc:ZDB-GENE-040625-18]
60. abca4a ENSDARG00000057169 27 0.964 - - - - - - 0.964 - - ATP-binding cassette, sub-family A (ABC1), member 4a [Source:ZFIN;Acc:ZDB-GENE-050517-3]
61. BX548021.2_1 BX548021.2_1 164 0.964 - - - - - - 0.964 - -
62. adam19b ENSDARG00000067545 162 0.964 - - - - - - 0.964 - - ADAM metallopeptidase domain 19b [Source:ZFIN;Acc:ZDB-GENE-070705-541]
63. agps ENSDARG00000042821 203 0.963 - - - - - - 0.963 - - alkylglycerone phosphate synthase [Source:ZFIN;Acc:ZDB-GENE-031118-14]
64. C4H12orf45 C4H12orf45 483 0.963 - - - - - - 0.963 - -
65. BX324198.2 BX324198.2 84 0.961 - - - - - - 0.961 - -
66. mtx3 ENSDARG00000090195 42 0.961 - - - - - - 0.961 - - metaxin 3 [Source:ZFIN;Acc:ZDB-GENE-021210-3]
67. si:dkey-161j23.7 ENSDARG00000092882 180 0.96 - 0.960 - - - - - - - si:dkey-161j23.7 [Source:ZFIN;Acc:ZDB-GENE-091204-391]
68. otud4 ENSDARG00000077810 120 0.959 - - - - - - 0.959 - - OTU deubiquitinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5338]
69. BX465186.1 ENSDARG00000093047 28 0.959 - - - - - - 0.959 - -
70. SLC39A11 ENSDARG00000098194 23 0.958 - 0.958 - - - - - - - solute carrier family 39 member 11 [Source:HGNC Symbol;Acc:HGNC:14463]
71. si:ch211-213i16.2 si:ch211-213i16.2 6 0.957 - - - - - 0.957 - - -
72. tmprss13b ENSDARG00000077573 47 0.957 - - - - - 0.957 - - - transmembrane serine protease 13b [Source:ZFIN;Acc:ZDB-GENE-090309-2]
73. macrod1 ENSDARG00000029609 66 0.955 - - - - - - 0.955 - - MACRO domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040912-100]
74. dmrta2 ENSDARG00000039412 328 0.954 - - - - - - 0.954 - - DMRT-like family A2 [Source:ZFIN;Acc:ZDB-GENE-041116-2]
75. phpt1 ENSDARG00000045567 211 0.954 - - - - - - 0.954 - - phosphohistidine phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-85]
76. CR407594.2 CR407594.2 145 0.953 - - - - - - 0.953 - -
77. acss1 ENSDARG00000044142, ENSDARG00000109700 516 0.952 - - - - - - 0.952 - - acyl-CoA synthetase short chain family member 1 [Source:ZFIN;Acc:ZDB-GENE-050320-139]
78. si:ch211-162i8.5 ENSDARG00000111716 76 0.951 - - - - - - 0.951 - - si:ch211-162i8.5 [Source:ZFIN;Acc:ZDB-GENE-110914-30]
79. gtpbp3 ENSDARG00000018650, ENSDARG00000111427 70 0.95 - 0.950 - - - - - - - GTP binding protein 3, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050522-335]
80. otud3 ENSDARG00000022648 263 0.95 - - - - - - 0.950 - - OTU deubiquitinase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2509]
81. brip1 ENSDARG00000074410, ENSDARG00000113993 501 0.949 - - - - - - 0.949 - - BRCA1 interacting protein C-terminal helicase 1 [Source:ZFIN;Acc:ZDB-GENE-081107-11]
82. TERF2IP ENSDARG00000103977 216 0.947 - - - - - 0.947 - - - telomeric repeat binding factor 2, interacting protein [Source:ZFIN;Acc:ZDB-GENE-131121-641]
83. habp2 ENSDARG00000057498 75 0.947 - - - - - - 0.947 - - hyaluronan binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4721]
84. hoxd13a ENSDARG00000059256 1190 0.945 - - - - - 0.945 - - - homeobox D13a [Source:ZFIN;Acc:ZDB-GENE-990415-119]
85. zgc:77151 ENSDARG00000054307 120 0.945 - - - - - - 0.945 - - zgc:77151 [Source:ZFIN;Acc:ZDB-GENE-030131-9097]
86. RAB43 ENSDARG00000059404 170 0.944 - - - - - - 0.944 - - RAB43, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-060825-25]
87. fam46a fam46a 92 0.942 - - - - - - 0.942 - -
88. si:dkey-265k11.2 si:dkey-265k11.2 44 0.941 - - - - - - 0.941 - -
89. litaf ENSDARG00000103483 217 0.939 - 0.939 - - - - - - - lipopolysaccharide-induced TNF factor [Source:ZFIN;Acc:ZDB-GENE-040704-23]
90. CT867948.2 CT867948.2 131 0.937 - - - - - - 0.937 - -
91. thtpa ENSDARG00000063049 286 0.937 - - - - - - 0.937 - - thiamine triphosphatase [Source:ZFIN;Acc:ZDB-GENE-070502-2]
92. mtfr1 ENSDARG00000045304 277 0.937 - - - - - - 0.937 - - mitochondrial fission regulator 1 [Source:ZFIN;Acc:ZDB-GENE-041212-86]
93. ero1l ero1l 66 0.934 - - - - - - 0.934 - -
94. EVA1B EVA1B 22 0.934 - - - - - - 0.934 - -
95. bcl9l ENSDARG00000055054 128 0.933 - 0.933 - - - - - - - B cell CLL/lymphoma 9-like [Source:ZFIN;Acc:ZDB-GENE-040927-29]
96. fam129bb ENSDARG00000008026, ENSDARG00000111074 702 0.932 - - - - - - 0.932 - - family with sequence similarity 129, member Bb [Source:ZFIN;Acc:ZDB-GENE-030131-6218]
97. si:ch211-208h1.1 si:ch211-208h1.1 262 0.932 - - - - - - 0.932 - -
98. si:ch211-229b6.1 ENSDARG00000093422 151 0.931 - - - - - - 0.931 - - si:ch211-229b6.1 [Source:ZFIN;Acc:ZDB-GENE-060503-311]
99. zgc:171489 ENSDARG00000052300 119 0.931 - - - - - - 0.931 - - zgc:171489 [Source:ZFIN;Acc:ZDB-GENE-080303-25]
100. rwdd2b ENSDARG00000055426 294 0.931 - - - - - - 0.931 - - RWD domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-041001-119]

There are 1039 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA